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Results for her15.1

Gene Name Gene ID Reads Annotation
her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]










Genes with expression patterns similar to her15.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
2. pou3f2a ENSDARG00000070220 817 4.066 - 0.714 0.868 - - 0.877 0.903 0.704 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
3. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.32 - - 0.708 0.719 - 0.961 0.932 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
4. nhlh2 ENSDARG00000025495 1860 2.775 - - 0.853 - - 0.937 0.985 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
5. CDK5R1 CDK5R1 562 2.731 - 0.843 - - - 0.964 0.924 - -
6. gfap ENSDARG00000025301 5584 2.689 - - 0.853 - - 0.909 0.927 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
7. nes ENSDARG00000088805 2710 2.648 - - - 0.705 - 0.960 0.983 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
8. syt11a ENSDARG00000057913 1145 2.643 - - 0.865 - - 0.804 0.974 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
9. nrarpb ENSDARG00000018958 6225 2.642 - - - 0.747 - 0.934 0.961 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
10. elavl4 ENSDARG00000045639 998 2.641 - 0.840 - - - 0.891 0.910 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
11. TUBA1A ENSDARG00000001889 25294 2.637 - - - 0.737 - 0.928 0.972 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
12. nova1 ENSDARG00000020178 4129 2.627 - - 0.846 - - 0.935 0.846 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
13. her2 ENSDARG00000038205 3219 2.625 - - - 0.806 - 0.880 0.939 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
14. SPOCK1 ENSDARG00000074644 794 2.611 - - - - 0.706 0.945 0.960 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
15. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.561 - - - 0.764 - 0.937 0.860 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
16. ATP6AP1L ATP6AP1L 164 2.561 - 0.714 - - - 0.876 0.971 - -
17. st18 663 2.54 0.794 - - - - 0.781 0.965 - - suppression of tumorigenicity 18, zinc finger
18. adcyap1b ENSDARG00000027740 1539 2.536 - - - - - 0.864 0.918 0.754 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
19. cldn5a ENSDARG00000043716 3865 2.524 - - 0.783 - - 0.790 0.951 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
20. SLITRK4 ENSDARG00000079781 54 2.517 - 0.714 - - - 0.897 0.906 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
21. skor1b ENSDARG00000062448, ENSDARG00000112341 282 2.508 - 1.000 - - - 0.800 0.708 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
22. RNF208 ENSDARG00000078056 60 2.504 0.711 - - - - 0.812 0.981 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
23. mapk12b ENSDARG00000006409 2246 2.483 - - 0.828 - - 0.715 0.940 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
24. cdh7 582 2.477 - 0.776 - - - 0.778 0.923 - - cadherin 7, type 2, transcript variant X1
25. vezf1a ENSDARG00000008247 1449 2.47 - - - 0.757 - 0.833 0.880 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
26. coe2 coe2 1633 2.464 - - 0.850 - - 0.868 0.746 - -
27. fabp7a ENSDARG00000007697 5211 2.436 - - - 0.715 - 0.839 0.882 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
28. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.434 - - - 0.733 - 0.877 0.824 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
29. ADAM22 ENSDARG00000060532 2259 2.411 - - - - - 0.730 0.968 0.713 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
30. cuedc1a ENSDARG00000068716 232 2.361 - - - - - 0.729 0.921 0.711 - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
31. lhx5 ENSDARG00000057936 785 2.351 - - - - - 0.752 0.881 0.718 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
32. pcdh19 ENSDARG00000034344 2378 2.332 - - - 0.720 - 0.858 0.754 - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
33. dbx1a ENSDARG00000086393 3161 2.326 - - - - - 0.885 0.735 0.706 - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
34. ntrk2a ENSDARG00000059897 185 2.326 - 0.730 - - - 0.717 0.879 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
35. CR538726.1 ENSDARG00000097179 321 2.323 - 0.714 - - - 0.714 0.895 - -
36. fam60al 2846 2.295 - - - 0.775 - 0.786 0.734 - - family with sequence similarity 60, member A, like
37. ank2b ENSDARG00000043313 3065 2.28 - 0.762 - - - 0.793 0.725 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
38. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.277 - - - 0.702 - 0.807 0.768 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
39. nova2 ENSDARG00000017673 7685 1.942 - - - - - 0.973 0.969 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
40. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.94 - - - - - 0.958 0.982 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
41. nadl1.1 1200 1.93 - - - - - 0.971 0.959 - - neural adhesion molecule L1.1, transcript variant X1
42. vim ENSDARG00000010008 3551 1.925 - - - - - 0.974 0.951 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
43. slc18a3a ENSDARG00000006356 1285 1.922 - - - - - 0.962 0.960 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
44. neurog1 ENSDARG00000056130 3924 1.92 - - - - - 0.965 0.955 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
45. elavl3 ENSDARG00000014420 8644 1.92 - - - - - 0.955 0.965 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
46. vgf ENSDARG00000105529 247 1.917 - - - - - 0.969 0.948 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
47. tmem35 ENSDARG00000052567 5685 1.911 - - - - - 0.960 0.951 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
48. fbxo41 ENSDARG00000078908 95 1.908 - - - - - 0.935 0.973 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
49. neflb ENSDARG00000012426 298 1.9 - - - - - 0.956 0.944 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
50. C8H1orf106 C8H1orf106 2690 1.896 - - - - - 0.956 0.940 - -
51. dync1i1 ENSDARG00000060948 554 1.893 - - - - - 0.936 0.957 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
52. TTBK1_1 TTBK1_1 132 1.884 - 0.946 - - - - 0.938 - -
53. atp6v0cb ENSDARG00000036577 3472 1.881 - - - - - 0.934 0.947 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
54. msi1 ENSDARG00000010710 2634 1.878 - - - - - 0.972 0.906 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
55. her4.3 ENSDARG00000070770 613 1.876 - - - - - 0.910 0.966 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
56. calca ENSDARG00000056590 150 1.873 - - - - - 0.921 0.952 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
57. nell2b ENSDARG00000062797 854 1.867 - - - - - 0.970 0.897 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
58. AGO1 ENSDARG00000092644 4521 1.867 - - - - - 0.954 0.913 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
59. rheb ENSDARG00000090213 1432 1.865 - - - - - 0.917 0.948 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
60. dpysl3 ENSDARG00000002587 4381 1.865 - - - - - 0.958 0.907 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
61. epha4b ENSDARG00000011600 3110 1.862 - - - - - 0.962 0.900 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
62. itm2ca ENSDARG00000043448 1265 1.861 - - - - - 0.918 0.943 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
63. vsnl1b ENSDARG00000044053 1120 1.858 - - - - - 0.956 0.902 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
64. BX511121.1 ENSDARG00000029997 1774 1.856 - - - - - 0.894 0.962 - -
65. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.855 - - - - - 0.918 0.937 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
66. chat chat 463 1.855 - - - - - 0.904 0.951 - -
67. pcdh1gc5 ENSDARG00000104826 10052 1.854 - - - - - 0.882 0.972 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
68. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.854 - - - - - 0.891 0.963 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
69. sall3b ENSDARG00000057586 982 1.853 - - - - - 0.938 0.915 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
70. slc12a5b ENSDARG00000078187 329 1.852 - - - - - 0.857 0.995 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
71. her4.1 ENSDARG00000056732 1264 1.85 - - - - - 0.914 0.936 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
72. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.849 - - - - - 0.953 0.896 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
73. CABZ01111990.1 CABZ01111990.1 4374 1.849 - - - - - 0.938 0.911 - -
74. ctnnd2b ENSDARG00000003779 964 1.847 - - - - - 0.876 0.971 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
75. tmie ENSDARG00000069423 305 1.847 - - - - - 0.932 0.915 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
76. dnajc5aa ENSDARG00000042948 2885 1.846 - - - - - 0.942 0.904 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
77. slc1a3a ENSDARG00000104431 9888 1.846 - - - - - 0.896 0.950 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
78. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.845 - - - - - 0.939 0.906 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
79. tuba1c ENSDARG00000055216 8384 1.844 - - - - - 0.927 0.917 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
80. myt1b ENSDARG00000102879 5411 1.84 - - - - - 0.923 0.917 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
81. grin1a ENSDARG00000027828 1327 1.838 - - - - - 0.948 0.890 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
82. ckbb ENSDARG00000043257 3503 1.836 - - - - - 0.933 0.903 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
83. AL935029.1 AL935029.1 514 1.836 - - - - - 0.887 0.949 - -
84. Sep-03 Sep-03 1124 1.835 - - - - - 0.905 0.930 - -
85. clstn1 ENSDARG00000031720 5286 1.833 - - - - - 0.932 0.901 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
86. sox14 ENSDARG00000070929 352 1.833 - 1.000 - - - - 0.833 - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
87. ptprna ENSDARG00000058646 1327 1.833 - - - - - 0.890 0.943 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
88. her8.2 ENSDARG00000069675 315 1.831 - - - - - 0.852 0.979 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
89. rap2ip rap2ip 681 1.829 - - - - - 0.854 0.975 - -
90. CU928222.1 ENSDARG00000097436 1662 1.828 - - - - - 0.876 0.952 - -
91. trim36 ENSDARG00000062794 785 1.827 - - - - - 0.887 0.940 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
92. pcp4b 1080 1.827 - - - - - 0.891 0.936 - - Purkinje cell protein 4b
93. dbx2 2971 1.827 - - - - - 0.913 0.914 - - developing brain homeobox 2
94. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.826 - - - - - 0.869 0.957 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
95. STMN3 ENSDARG00000038465 1009 1.825 - - - - - 0.919 0.906 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
96. mllt11 ENSDARG00000071026 2518 1.824 - - - - - 0.892 0.932 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
97. lgi1a ENSDARG00000020493 1218 1.822 - - - - - 0.864 0.958 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
98. cspg5a ENSDARG00000069981 1699 1.817 - - - - - 0.871 0.946 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
99. relnl relnl 863 1.816 - - - - - 0.954 0.862 - -
100. st8sia2 ENSDARG00000018788 2183 1.815 - - - - - 0.848 0.967 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]

There are 2292 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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