Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for her11

Gene Name Gene ID Reads Annotation
her11 ENSDARG00000002707 29 hairy-related 11 [Source:ZFIN;Acc:ZDB-GENE-040824-4]










Genes with expression patterns similar to her11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her11 ENSDARG00000002707 29 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 hairy-related 11 [Source:ZFIN;Acc:ZDB-GENE-040824-4]
2. smyd3 ENSDARG00000058050 69 1.664 - - - - 0.810 0.854 - - - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
3. DMBX1 DMBX1 140 1.617 - - - 0.879 - - - - 0.738
4. rpusd1 ENSDARG00000060192 86 1.602 - - - - 0.751 0.851 - - - RNA pseudouridylate synthase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-444]
5. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 1.59 - - 0.878 0.712 - - - - -
6. si:ch211-122l14.7 ENSDARG00000095576 5 1.558 - - - 0.817 - - - 0.741 - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
7. CUL9 2 1.533 - - - 0.817 - - - - 0.716 cullin 9
8. zbbx ENSDARG00000069723 6 1.461 - - - 0.745 - - - - 0.716 zinc finger, B-box domain containing [Source:ZFIN;Acc:ZDB-GENE-061207-76]
9. si:dkeyp-80c12.4 ENSDARG00000036479 7 1 - - - - - - - 1.000 - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
10. si:rp71-36n21.1 93 0.979 - - - - 0.979 - - - - si:rp71-36n21.1
11. CEACAM7 CEACAM7 46 0.978 - - - - 0.978 - - - -
12. ttc22 ENSDARG00000077836 21 0.976 - - - - 0.976 - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
13. yif1b ENSDARG00000040505 47 0.974 - - - - - - - - 0.974 Yip1 interacting factor homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-16]
14. si:ch211-160d14.9 8 0.974 - - - - 0.974 - - - - si:ch211-160d14.9, transcript variant X1
15. AL935186.1 ENSDARG00000025046 6 0.973 - - - - 0.973 - - - -
16. PGS1 ENSDARG00000075857 5 0.973 - - - - 0.973 - - - - phosphatidylglycerophosphate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-170216-1]
17. cdx1a ENSDARG00000114554 28 0.973 - - - - 0.973 - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
18. ZBED1_3 ZBED1_3 7 0.973 - - - - 0.973 - - - -
19. CABZ01081748.1 ENSDARG00000102139 31 0.972 - - - - 0.972 - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
20. BX465841.1 BX465841.1 47 0.968 - - - - 0.968 - - - -
21. il13 ENSDARG00000077809 8 0.967 - - - - 0.967 - - - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
22. si:ch211-250g4.3 ENSDARG00000092945 150 0.967 - - - - 0.967 - - - - si:ch211-250g4.3 [Source:ZFIN;Acc:ZDB-GENE-060503-506]
23. insig2 ENSDARG00000113367 27 0.966 - - - - 0.966 - - - - insulin induced gene 2 [Source:ZFIN;Acc:ZDB-GENE-040202-1]
24. DUSP18 DUSP18 117 0.959 - - - - 0.959 - - - -
25. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 0.957 - - - - 0.957 - - - -
26. tnfaip8l2a ENSDARG00000075592 90 0.954 - - - - 0.954 - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
27. AC024175.21 AC024175.21 10 0.953 - - - - 0.953 - - - -
28. CU467646.3 ENSDARG00000099076 36 0.953 - - - - 0.953 - - - - mucin-2-like [Source:NCBI gene;Acc:108179180]
29. CABZ01074899.1 CABZ01074899.1 89 0.952 - - - - 0.952 - - - -
30. CCDC89 CCDC89 40 0.951 - - - - 0.951 - - - -
31. dnah12 ENSDARG00000059987 110 0.941 - - - - 0.941 - - - - dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
32. C25H12orf29 C25H12orf29 31 0.937 - - - - 0.937 - - - -
33. si:ch211-216b21.2 ENSDARG00000060253 54 0.926 - - - - 0.926 - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
34. si:dkey-167i21.2 ENSDARG00000093886 10 0.924 - - - - 0.924 - - - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
35. tsga10 ENSDARG00000052512 79 0.911 - - - - 0.911 - - - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
36. ADCYAP1R1 ADCYAP1R1 118 0.91 - - - - 0.910 - - - -
37. fasn ENSDARG00000087657 99 0.909 - - - - 0.909 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
38. ano2 ENSDARG00000101363 50 0.909 - - - - 0.909 - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
39. zgc:113030 ENSDARG00000069869 53 0.907 - - 0.907 - - - - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
40. atg10 ENSDARG00000104846 85 0.907 - - - - 0.907 - - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
41. zhx2 zhx2 365 0.902 - - - - 0.902 - - - -
42. pde5ab ENSDARG00000051915 18 0.901 - - - - 0.901 - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
43. RCVRN_1 RCVRN_1 46 0.901 - - - 0.901 - - - - -
44. calhm2 ENSDARG00000039482 138 0.899 - - - - 0.899 - - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
45. si:dkey-222o15.5 si:dkey-222o15.5 27 0.899 - - - - - - - - 0.899
46. CR932360.4 CR932360.4 3 0.898 - - 0.898 - - - - - -
47. si:ch211-133l5.5 si:ch211-133l5.5 123 0.897 - - - 0.897 - - - - -
48. flh flh 47 0.896 - - - 0.896 - - - - -
49. CU467982.1 CU467982.1 12 0.894 - - 0.894 - - - - - -
50. RFESD_2 RFESD_2 29 0.892 - - 0.892 - - - - - -
51. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 0.89 - - - - 0.890 - - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
52. myt1la ENSDARG00000008209 120 0.89 - - - - 0.890 - - - - myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
53. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 0.889 - - - - - - - - 0.889 zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
54. npy ENSDARG00000036222 14 0.889 - - - - - - - - 0.889 neuropeptide Y [Source:ZFIN;Acc:ZDB-GENE-980526-438]
55. CR388013.3 CR388013.3 45 0.886 - - - - 0.886 - - - -
56. crx ENSDARG00000011989, ENSDARG00000113850 330 0.886 - - - 0.886 - - - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
57. ankk1 ENSDARG00000056921 119 0.885 - - - - 0.885 - - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
58. si:ch211-152p11.8 46 0.883 - - 0.883 - - - - - - si:ch211-152p11.8, transcript variant X2
59. gsto1 ENSDARG00000022183 13 0.882 - - - 0.882 - - - - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
60. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 0.881 - - - - 0.881 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
61. grk7a ENSDARG00000020602 10 0.879 - - - 0.879 - - - - - G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
62. snapc1a ENSDARG00000029569 25 0.878 - - 0.878 - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
63. CABZ01088365.1 CABZ01088365.1 66 0.878 - - 0.878 - - - - - -
64. si:dkey-234l24.8 ENSDARG00000093588 7 0.878 - - 0.878 - - - - - - si:dkey-234l24.8 [Source:ZFIN;Acc:ZDB-GENE-050420-23]
65. SYDE1 ENSDARG00000077440 4 0.878 - - 0.878 - - - - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
66. TWF1 TWF1 3 0.878 - - 0.878 - - - - - -
67. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 0.878 - - 0.878 - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
68. U6_14 U6_14 3 0.878 - - 0.878 - - - - - -
69. l3mbtl1a ENSDARG00000014828 119 0.878 - - 0.878 - - - - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
70. casp6 ENSDARG00000093405, ENSDARG00000115863 11 0.878 - - 0.878 - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
71. nek8 ENSDARG00000045626, ENSDARG00000117017 67 0.878 - - - - 0.878 - - - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
72. si:dkey-282h22.5 ENSDARG00000092458 7 0.878 - - 0.878 - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
73. APOBEC2 APOBEC2 9 0.878 - - 0.878 - - - - - -
74. si:ch211-14k19.8 ENSDARG00000088975 7 0.878 - - 0.878 - - - - - - si:ch211-14k19.8 [Source:ZFIN;Acc:ZDB-GENE-051214-4]
75. si:dkey-15h8.12 si:dkey-15h8.12 206 0.875 - - - - 0.875 - - - -
76. si:dkey-27n6.9 51 0.874 - - 0.874 - - - - - - si:dkey-27n6.9, transcript variant X4
77. WSCD1 ENSDARG00000098113 35 0.874 - - 0.874 - - - - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
78. her7 ENSDARG00000017917 53 0.874 - - 0.874 - - - - - - hairy and enhancer of split related-7 [Source:ZFIN;Acc:ZDB-GENE-000427-6]
79. tlcd1 ENSDARG00000002391 90 0.874 - - - - 0.874 - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
80. zgc:162344 ENSDARG00000070040 126 0.873 - - - - 0.873 - - - - zgc:162344 [Source:ZFIN;Acc:ZDB-GENE-030131-6058]
81. si:ch211-225b11.4 ENSDARG00000093563 42 0.873 - - 0.873 - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
82. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 0.873 - - - 0.873 - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
83. cobl ENSDARG00000091006 4 0.872 - - 0.872 - - - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
84. coro2ba ENSDARG00000079440 420 0.871 - - - - 0.871 - - - - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
85. tfap2d ENSDARG00000023272 308 0.871 - - - 0.871 - - - - - transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
86. si:ch211-286e11.3 si:ch211-286e11.3 20 0.871 - - - - - - - 0.871 -
87. CU467824.1 CU467824.1 76 0.869 - - - - 0.869 - - - -
88. rpe65a ENSDARG00000007480 52 0.867 - - - 0.867 - - - - - retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
89. ak8 ENSDARG00000030961, ENSDARG00000113361, ENSDARG00000116619 50 0.866 - - - - 0.866 - - - - adenylate kinase 8 [Source:ZFIN;Acc:ZDB-GENE-050522-275]
90. ccdc24 ENSDARG00000038793 7 0.864 - - 0.864 - - - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
91. zgc:154055 ENSDARG00000103924 452 0.863 - - 0.863 - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
92. dio1 ENSDARG00000042112 87 0.859 - - - 0.859 - - - - - iodothyronine deiodinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-41]
93. C17H15orf52 244 0.859 - - - - 0.859 - - - - chromosome 17 C15orf52 homolog, transcript variant X3
94. zgc:171501 ENSDARG00000075375 11 0.854 - - - - - 0.854 - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
95. zgc:109965 ENSDARG00000012126 11 0.854 - - - 0.854 - - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
96. NEK3 ENSDARG00000058869 55 0.854 - - - - 0.854 - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
97. CABZ01072557.1 CABZ01072557.1 9 0.854 - - - - - 0.854 - - -
98. gcgb ENSDARG00000040907 182 0.854 - - - - - 0.854 - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
99. NETO2_1 NETO2_1 15 0.854 - - - - - 0.854 - - -
100. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 0.854 - - - - - 0.854 - - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]

There are 396 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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