Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for her1

Gene Name Gene ID Reads Annotation
her1 ENSDARG00000014722 29 hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]










Genes with expression patterns similar to her1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her1 ENSDARG00000014722 29 4 - - - 1.000 1.000 - 1.000 - 1.000 hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]
2. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 2 - - - 1.000 - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
3. RBBP6_2 RBBP6_2 23 1.967 - - - - - - 1.000 - 0.967
4. CABZ01073069.1 CABZ01073069.1 5 1.967 - - - - - - 1.000 - 0.967
5. zgc:113263 ENSDARG00000045842 51 1.92 - - - 0.920 - - 1.000 - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
6. SIRT4 ENSDARG00000010415 118 1.888 - - - - 0.888 - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
7. zgc:152968 ENSDARG00000037002 6 1.869 - - - - 0.869 - 1.000 - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
8. si:dkey-202i12.5 si:dkey-202i12.5 20 1.865 - - - - 0.865 - 1.000 - -
9. rictora ENSDARG00000100867 20 1.86 - - - - 0.860 - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
10. TULP1 TULP1 50 1.822 - - - - 0.822 - 1.000 - -
11. si:ch73-155e10.1 si:ch73-155e10.1 13 1.766 - - - - 0.799 - - - 0.967
12. ENSDARG00000029117 ENSDARG00000029117 80 1.746 - - - - - - 1.000 - 0.746
13. arsk ENSDARG00000059714, ENSDARG00000115105 31 1.721 - - - - 0.721 - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
14. mir148 75 1.684 - - - - 0.790 - - - 0.894 microRNA 148
15. msgn1 ENSDARG00000070546 188 1.681 - - - - 0.936 - 0.745 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
16. si:ch211-274p24.4 ENSDARG00000087088 36 1.674 - - - - 0.830 - 0.844 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
17. zgc:174696 ENSDARG00000110658 67 1.578 - - - 0.858 - - 0.720 - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
18. si:dkey-200l5.4 ENSDARG00000095294 13 1.555 - - - - 0.835 - 0.720 - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
19. map3k19 ENSDARG00000094272 59 1.503 - - - - 0.767 - 0.736 - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
20. CCDC180 ENSDARG00000032372 21 1.473 - - - - 0.724 - 0.749 - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
21. vps33a ENSDARG00000101116, ENSDARG00000113488 24 1.45 - - - - - - 0.717 - 0.733 vacuolar protein sorting 33A [Source:ZFIN;Acc:ZDB-GENE-040914-82]
22. si:dkey-26i13.6 ENSDARG00000092200 3 1 - - - - - - 1.000 - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
23. CDK18 ENSDARG00000012204 5 1 - - - - - - 1.000 - - cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
24. grapa ENSDARG00000005414 29 1 - - - - - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
25. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
26. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
27. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
28. DDO DDO 0 1 - - - - - - 1.000 - -
29. ccdc85a ENSDARG00000039497 24 1 - - - - - - 1.000 - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
30. GSC2 GSC2 3 1 - - - - - - 1.000 - -
31. CDHR5 CDHR5 2 1 - - - - - - 1.000 - -
32. mettl8 ENSDARG00000017359 36 1 - - - - - - 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
33. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1 - - - - - - 1.000 - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
34. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - - - 1.000 - -
35. ifit2 ifit2 11 1 - - - - - - 1.000 - -
36. zgc:136461 ENSDARG00000093844, ENSDARG00000114728 1 1 - - - - - - 1.000 - - zgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
37. si:ch211-271g18.4 ENSDARG00000115564 197 1 - - - - - - 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
38. irf10 ENSDARG00000027658 7 1 - - - - - - 1.000 - - interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
39. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
40. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
41. si:dkey-267i17.3 si:dkey-267i17.3 4 1 - - - - - - 1.000 - -
42. tmem86b ENSDARG00000038296 3 1 - - - - - - 1.000 - - transmembrane protein 86B [Source:ZFIN;Acc:ZDB-GENE-060825-132]
43. BX511266.1 BX511266.1 21 1 - - - - - - 1.000 - -
44. ptger4a ENSDARG00000059236 13 1 - - - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
45. C1S_1 C1S_1 11 1 - - - - - - 1.000 - -
46. RBBP6_9 RBBP6_9 1 1 - - - - - - 1.000 - -
47. MAL2_1 MAL2_1 6 1 - - - - - - 1.000 - -
48. CU367845.1_1 CU367845.1_1 43 1 - - - - - - 1.000 - -
49. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
50. mipol1 ENSDARG00000104845 6 1 - - - - - - 1.000 - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
51. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
52. CCL19 CCL19 6 1 - - - 1.000 - - - - -
53. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
54. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
55. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - - 1.000 - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
56. taar20t ENSDARG00000095035 1 1 - - - - - - 1.000 - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
57. kmo ENSDARG00000009160 7 1 - - - 1.000 - - - - - kynurenine 3-monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030424-4]
58. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - 1.000 - -
59. ZNRF4 ZNRF4 16 1 - - - 1.000 - - - - -
60. RDM1 RDM1 28 1 - - - - - - 1.000 - -
61. sycp1 ENSDARG00000003904 8 1 - - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
62. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
63. tuba7l ENSDARG00000104643 33 1 - - - - - - 1.000 - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
64. CU633991.1 CU633991.1 16 1 - - - - - - 1.000 - -
65. TRIM35_1 TRIM35_1 11 1 - - - - - - 1.000 - -
66. CABZ01076234.1 CABZ01076234.1 49 1 - - - - - - 1.000 - -
67. VWDE ENSDARG00000103443 10 1 - - - - - - 1.000 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
68. DGKA DGKA 8 1 - - - - - - 1.000 - -
69. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
70. nudt4b ENSDARG00000045878 10 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
71. try 21 1 - - - - - - 1.000 - - trypsin
72. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
73. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
74. fbxo36b ENSDARG00000039152 7 1 - - - - - - 1.000 - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
75. fabp10a ENSDARG00000038439 4 1 - - - - - - 1.000 - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
76. fech ENSDARG00000003462 212 1 - - - - - - 1.000 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
77. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
78. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
79. CABZ01080074.1 ENSDARG00000076371 0 1 - - - - - - 1.000 - - shroom family member 2b [Source:NCBI gene;Acc:556551]
80. si:dkey-97l20.1 si:dkey-97l20.1 1 1 - - - 1.000 - - - - -
81. si:dkey-6o1.2 si:dkey-6o1.2 12 1 - - - - - - 1.000 - -
82. cep68 ENSDARG00000039411 30 1 - - - - - - 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
83. si:dkey-240h12.4 ENSDARG00000034210 114 1 - - - 1.000 - - - - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
84. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
85. BX664625.1 ENSDARG00000043131 8 1 - - - - - - 1.000 - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
86. def8 ENSDARG00000068208 50 1 - - - - - - 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
87. TNFSF14 ENSDARG00000111357 2 1 - - - - - - 1.000 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
88. mocs1 ENSDARG00000078479 1 1 - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]
89. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - 1.000 - -
90. si:ch211-139g16.8 ENSDARG00000093074 13 1 - - - - - - 1.000 - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
91. CR354540.1 ENSDARG00000004051 10 1 - - - - - - 1.000 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
92. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - - 1.000 - -
93. SLC2A4RG SLC2A4RG 47 1 - - - - - - 1.000 - -
94. flt3 ENSDARG00000058503 32 1 - - - - - - 1.000 - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
95. BX537350.1 BX537350.1 8 1 - - - - - - 1.000 - -
96. si:ch73-388k15.1 si:ch73-388k15.1 0 1 - - - - - - 1.000 - -
97. si:ch211-39n21.1 si:ch211-39n21.1 0 1 - - - - - - 1.000 - -
98. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
99. ubtd1b ENSDARG00000079623 26 1 - - - - - - 1.000 - - ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
100. FOXO6_1 FOXO6_1 73 1 - - - - - - 1.000 - -

There are 652 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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