Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for her1

Gene Name Gene ID Reads Annotation
her1 ENSDARG00000014722 29 hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]










Genes with expression patterns similar to her1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her1 ENSDARG00000014722 29 4 - - - 1.000 1.000 - 1.000 - 1.000 hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]
2. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 2 - - - 1.000 - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
3. CABZ01073069.1 CABZ01073069.1 5 1.967 - - - - - - 1.000 - 0.967
4. RBBP6_2 RBBP6_2 23 1.967 - - - - - - 1.000 - 0.967
5. zgc:113263 ENSDARG00000045842 51 1.92 - - - 0.920 - - 1.000 - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
6. SIRT4 ENSDARG00000010415 118 1.888 - - - - 0.888 - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
7. zgc:152968 ENSDARG00000037002 6 1.869 - - - - 0.869 - 1.000 - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
8. si:dkey-202i12.5 si:dkey-202i12.5 20 1.865 - - - - 0.865 - 1.000 - -
9. rictora ENSDARG00000100867 20 1.86 - - - - 0.860 - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
10. TULP1 TULP1 50 1.822 - - - - 0.822 - 1.000 - -
11. si:ch73-155e10.1 si:ch73-155e10.1 13 1.766 - - - - 0.799 - - - 0.967
12. ENSDARG00000029117 ENSDARG00000029117 80 1.746 - - - - - - 1.000 - 0.746
13. arsk ENSDARG00000059714, ENSDARG00000115105 31 1.721 - - - - 0.721 - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
14. mir148 75 1.684 - - - - 0.790 - - - 0.894 microRNA 148
15. msgn1 ENSDARG00000070546 188 1.681 - - - - 0.936 - 0.745 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
16. si:ch211-274p24.4 ENSDARG00000087088 36 1.674 - - - - 0.830 - 0.844 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
17. zgc:174696 ENSDARG00000110658 67 1.578 - - - 0.858 - - 0.720 - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
18. si:dkey-200l5.4 ENSDARG00000095294 13 1.555 - - - - 0.835 - 0.720 - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
19. map3k19 ENSDARG00000094272 59 1.503 - - - - 0.767 - 0.736 - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
20. CCDC180 ENSDARG00000032372 21 1.473 - - - - 0.724 - 0.749 - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
21. vps33a ENSDARG00000101116, ENSDARG00000113488 24 1.45 - - - - - - 0.717 - 0.733 vacuolar protein sorting 33A [Source:ZFIN;Acc:ZDB-GENE-040914-82]
22. fbxo36b ENSDARG00000039152 7 1 - - - - - - 1.000 - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
23. tti2 ENSDARG00000073773 19 1 - - - - - - 1.000 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
24. mettl8 ENSDARG00000017359 36 1 - - - - - - 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
25. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 - - - - - - 1.000 - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
26. inpp5ja ENSDARG00000078542 0 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase Ja [Source:ZFIN;Acc:ZDB-GENE-091117-4]
27. zgc:194659 ENSDARG00000079347 17 1 - - - - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
28. abcg5 ENSDARG00000063078, ENSDARG00000115809 0 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-40]
29. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 1 - - - - - - 1.000 - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
30. ubtd1b ENSDARG00000079623 26 1 - - - - - - 1.000 - - ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
31. il34 ENSDARG00000091003 14 1 - - - - - - 1.000 - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
32. SLC2A4RG SLC2A4RG 47 1 - - - - - - 1.000 - -
33. si:dkey-9p20.24 si:dkey-9p20.24 4 1 - - - - - - 1.000 - -
34. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
35. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
36. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - - 1.000 - -
37. DLK1 60 1 - - - - - - 1.000 - - delta like non-canonical Notch ligand 1
38. CACNA1E 18 1 - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 E, transcript variant X6
39. CABZ01076234.1 CABZ01076234.1 49 1 - - - - - - 1.000 - -
40. sycp1 ENSDARG00000003904 8 1 - - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
41. fank1 ENSDARG00000039657 9 1 - - - 1.000 - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
42. si:ch211-39n21.1 si:ch211-39n21.1 0 1 - - - - - - 1.000 - -
43. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
44. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
45. TRPC4 TRPC4 18 1 - - - - - - 1.000 - -
46. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
47. BBX ENSDARG00000012699 79 1 - - - - - - 1.000 - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
48. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
49. gstp2 ENSDARG00000103019 9 1 - - - - - - 1.000 - - glutathione S-transferase pi 2 [Source:ZFIN;Acc:ZDB-GENE-050601-1]
50. CABZ01053600.1 CABZ01053600.1 0 1 - - - - - - 1.000 - -
51. ZNRF4 ZNRF4 16 1 - - - 1.000 - - - - -
52. igsf21b ENSDARG00000056084 6 1 - - - 1.000 - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
53. tmem174 ENSDARG00000035388 2 1 - - - - - - 1.000 - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
54. upp2 ENSDARG00000036833 1 1 - - - - - - 1.000 - - uridine phosphorylase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-830]
55. cacng7a ENSDARG00000063006 2 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
56. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - - - 1.000 - -
57. si:ch211-238e22.5 ENSDARG00000100229 0 1 - - - - - - 1.000 - - si:ch211-238e22.5 [Source:ZFIN;Acc:ZDB-GENE-041210-374]
58. si:ch211-219a15.4 ENSDARG00000068951 3 1 - - - - - - 1.000 - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
59. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
60. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
61. si:ch211-271g18.4 ENSDARG00000115564 197 1 - - - - - - 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
62. si:dkeyp-8f4.7 si:dkeyp-8f4.7 1 1 - - - 1.000 - - - - -
63. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - - - 1.000 - -
64. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
65. si:ch211-234c11.1 si:ch211-234c11.1 3 1 - - - 1.000 - - - - -
66. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
67. si:dkey-220o21.3 ENSDARG00000103079 1 1 - - - - - - 1.000 - - si:dkey-220o21.3 [Source:ZFIN;Acc:ZDB-GENE-110914-75]
68. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 1 - - - - - - 1.000 - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
69. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
70. styx ENSDARG00000057699 48 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
71. si:dkey-230i18.2 ENSDARG00000093532 0 1 - - - - - - 1.000 - - si:dkey-230i18.2 [Source:ZFIN;Acc:ZDB-GENE-070912-457]
72. fabp10a ENSDARG00000038439 4 1 - - - - - - 1.000 - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
73. si:dkey-6o1.2 si:dkey-6o1.2 12 1 - - - - - - 1.000 - -
74. grn1 ENSDARG00000089362 20 1 - - - - - - 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
75. SLC37A4 SLC37A4 10 1 - - - 1.000 - - - - -
76. zgc:171704 ENSDARG00000018048 14 1 - - - - - - 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
77. TRIM35_1 TRIM35_1 11 1 - - - - - - 1.000 - -
78. cacng5a ENSDARG00000003326 17 1 - - - 1.000 - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
79. nceh1a ENSDARG00000020427 35 1 - - - - - - 1.000 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
80. ITIH4 ITIH4 9 1 - - - - - - 1.000 - -
81. si:ch211-80j13.1 si:ch211-80j13.1 2 1 - - - 1.000 - - - - -
82. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
83. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
84. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
85. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
86. cttnbp2nl cttnbp2nl 166 1 - - - - - - 1.000 - -
87. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - 1.000 - -
88. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
89. ZNF337_14 ZNF337_14 4 1 - - - 1.000 - - - - -
90. GMNC ENSDARG00000068719 28 1 - - - - - - 1.000 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
91. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
92. si:dkey-97a13.12 ENSDARG00000095649 14 1 - - - 1.000 - - - - - si:dkey-97a13.12 [Source:ZFIN;Acc:ZDB-GENE-070912-614]
93. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
94. ak7b ENSDARG00000017023 25 1 - - - - - - 1.000 - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
95. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
96. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
97. si:dkey-114e9.1 si:dkey-114e9.1 233 1 - - - - - - 1.000 - -
98. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - - 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
99. zmat4b ENSDARG00000061419 7 1 - - - - - - 1.000 - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
100. gcnt4b ENSDARG00000077550 2 1 - - - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]

There are 652 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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