Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for helt

Gene Name Gene ID Reads Annotation
helt ENSDARG00000056400 482 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]










Genes with expression patterns similar to helt

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. helt ENSDARG00000056400 482 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
2. ptprc ENSDARG00000071437 104 2.719 1.000 0.946 - - - - 0.773 - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
3. tbr1a ENSDARG00000076259 341 2.592 - - - 0.797 - - - 0.956 0.839 T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
4. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 2.449 - - 0.802 - 0.737 - - - 0.910 transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
5. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 2 1.000 - - - - - 1.000 - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
6. adprhl1 ENSDARG00000041589 34 1.93 - - - - 0.930 - 1.000 - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
7. PGBD4 ENSDARG00000079328 20 1.896 1.000 0.896 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
8. CABZ01065506.1 CABZ01065506.1 204 1.896 1.000 0.896 - - - - - - -
9. si:dkey-56m15.4 si:dkey-56m15.4 39 1.896 1.000 0.896 - - - - - - -
10. lppr5b lppr5b 23 1.896 1.000 0.896 - - - - - - -
11. si:ch211-10j20.7 si:ch211-10j20.7 8 1.896 1.000 0.896 - - - - - - -
12. BX548021.2 BX548021.2 4 1.896 1.000 0.896 - - - - - - -
13. si:dkey-4j21.1 17 1.896 1.000 0.896 - - - - - - - si:dkey-4j21.1, transcript variant X2
14. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.896 1.000 0.896 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
15. BX914198.1 BX914198.1 5 1.887 1.000 - - - 0.887 - - - -
16. si:dkey-256e21.1 si:dkey-256e21.1 11 1.887 - - - - 0.887 - 1.000 - -
17. zgc:113307 ENSDARG00000044894 17 1.887 1.000 - - - 0.887 - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
18. CABZ01021454.2 CABZ01021454.2 3 1.887 1.000 - - - 0.887 - - - -
19. LPHN1_1 LPHN1_1 7 1.887 1.000 - - - 0.887 - - - -
20. ZDHHC12 ZDHHC12 29 1.877 1.000 - - 0.877 - - - - -
21. elovl4a ENSDARG00000006773 412 1.866 1.000 - - - - - - 0.866 - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
22. CABZ01046997.2 CABZ01046997.2 7 1.857 - - - - 0.887 - 0.970 - -
23. cadpsb ENSDARG00000070567 458 1.852 - 1.000 - - - - - 0.852 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
24. CABZ01029822.1 ENSDARG00000086931 1654 1.851 0.883 0.968 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
25. AP5Z1 ENSDARG00000078111 91 1.837 1.000 - - - - 0.837 - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
26. pla2g4a pla2g4a 7 1.833 - 0.946 - - 0.887 - - - -
27. tfap2d ENSDARG00000023272 308 1.812 - - - - - - - 0.891 0.921 transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
28. BX649314.1 BX649314.1 3 1.811 1.000 - 0.811 - - - - - -
29. lrrc24 ENSDARG00000101704 224 1.806 - 0.946 - - - - - 0.860 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
30. pcsk5a ENSDARG00000067537 44 1.795 - 0.896 - - - - 0.899 - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
31. nkd2a ENSDARG00000055271 71 1.787 - - - - 0.826 - 0.961 - - naked cuticle homolog 2a [Source:ZFIN;Acc:ZDB-GENE-071130-1]
32. cnn1b ENSDARG00000102398 40 1.784 1.000 0.784 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
33. BX470224.1 ENSDARG00000092793 22 1.783 - 0.896 - - 0.887 - - - -
34. CR352260.1 CR352260.1 11 1.783 - 0.896 - - 0.887 - - - -
35. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 1.781 - - 0.850 - - - 0.931 - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
36. otx1a 1607 1.78 - - 0.898 - - - - - 0.882 orthodenticle homeobox 1a
37. PPFIA3 ENSDARG00000077053 310 1.775 0.879 0.896 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
38. TENM2 ENSDARG00000037122 48 1.774 0.878 0.896 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
39. ankha ENSDARG00000071724 23 1.772 - - - - - 0.811 0.961 - - ANKH inorganic pyrophosphate transport regulator a [Source:ZFIN;Acc:ZDB-GENE-050913-33]
40. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.77 0.874 0.896 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
41. synpr ENSDARG00000044278 20 1.767 1.000 - - 0.767 - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
42. ZAN ZAN 11 1.767 - - - - 0.887 - 0.880 - -
43. DMBX1 DMBX1 140 1.765 - - 0.836 - - - - - 0.929
44. XKR7 ENSDARG00000026333 175 1.752 0.856 0.896 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
45. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.75 0.854 0.896 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
46. ENSDARG00000091642 ENSDARG00000091642 14 1.742 - 0.946 - - 0.796 - - - -
47. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.741 0.826 0.915 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
48. si:dkey-245p14.4 ENSDARG00000070320 418 1.737 0.868 - - - - - 0.869 - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
49. DIP2B DIP2B 18 1.736 1.000 - 0.736 - - - - - -
50. ek1 ENSDARG00000020080 742 1.733 - - - 0.842 - - - 0.891 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
51. nyx ENSDARG00000061791 2 1.723 - 0.896 - 0.827 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
52. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.723 - 0.885 - - - - - - 0.838 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
53. BX530066.1 BX530066.1 42 1.717 0.863 - - - - - 0.854 - -
54. nitr3a_1 ENSDARG00000110676 44 1.712 - 0.896 - 0.816 - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
55. GADD45G GADD45G 382 1.709 0.813 0.896 - - - - - - -
56. eml1 ENSDARG00000042840 569 1.702 - 0.820 - - - - - 0.882 - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
57. phox2a ENSDARG00000007406 470 1.685 - - - - 0.746 - 0.939 - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
58. atp2b3b ENSDARG00000023445 1424 1.684 0.787 0.897 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
59. zgc:194665 ENSDARG00000004577 136 1.679 0.783 0.896 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
60. CU367845.1_1 CU367845.1_1 43 1.678 - - - 0.827 0.851 - - - -
61. foxg1d ENSDARG00000070053 32 1.677 - 0.896 - - 0.781 - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
62. CT867973.1 ENSDARG00000114801 13 1.676 - 0.896 0.780 - - - - - -
63. dmrta2 ENSDARG00000039412 328 1.674 - - - - - - - 0.883 0.791 DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
64. si:ch211-180a12.2 ENSDARG00000087857 2 1.672 - 0.785 - - 0.887 - - - - si:ch211-180a12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-236]
65. CR385054.2 CR385054.2 80 1.667 - 0.888 - - - 0.779 - - -
66. gpr22 gpr22 115 1.662 0.766 0.896 - - - - - - -
67. ankrd37 ENSDARG00000056376 131 1.66 0.802 - - - - - - 0.858 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
68. scin ENSDARG00000010728, ENSDARG00000111092 437 1.648 0.752 0.896 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
69. clstn2 ENSDARG00000060637 548 1.646 0.793 - - - - - - 0.853 - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
70. evx2 ENSDARG00000059255 317 1.634 0.802 - - 0.832 - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
71. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.634 - - - - - - 0.822 - 0.812 BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
72. SKOR2 SKOR2 1041 1.631 0.850 0.781 - - - - - - -
73. otx2 766 1.631 - - 0.827 - - - - - 0.804 orthodenticle homeobox 2, transcript variant X2
74. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.626 0.730 0.896 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
75. si:dkey-273g18.1_1 ENSDARG00000097405, ENSDARG00000105439 5 1.621 - 0.896 - - - - - - 0.725 si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
76. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1.613 - 0.896 - - - - - - 0.717 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
77. eomesa ENSDARG00000006640 257 1.609 - - - 0.741 - - - - 0.868 eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
78. PARP6 PARP6 119 1.609 - 0.896 - 0.713 - - - - -
79. crygn2 ENSDARG00000030411 2551 1.608 - - - 0.823 - - 0.785 - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
80. TUBB8P7 TUBB8P7 1353 1.607 0.770 0.837 - - - - - - -
81. crygm2d10 ENSDARG00000087765 358 1.604 - 0.896 - 0.708 - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
82. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.597 - 0.896 - 0.701 - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
83. tnni1b ENSDARG00000052708 478 1.596 - - 0.738 - 0.858 - - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
84. gsx1 ENSDARG00000035735 1243 1.59 0.780 - - - - - - - 0.810 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
85. RIMBP2_1 RIMBP2_1 57 1.589 - - - 0.792 - - 0.797 - -
86. CR318624.1 ENSDARG00000094618 5 1.588 - - - 0.827 0.761 - - - -
87. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.587 0.752 0.835 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
88. syngr3b ENSDARG00000025034 290 1.575 0.721 0.854 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
89. insm1b ENSDARG00000053301 2032 1.569 - - - - - - - 0.853 0.716 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
90. defbl1 ENSDARG00000075161 211 1.569 - - 0.770 0.799 - - - - - defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
91. nppa ENSDARG00000052960 295 1.567 - - 0.717 - 0.850 - - - - natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
92. cacna2d3 ENSDARG00000078760 211 1.557 0.795 0.762 - - - - - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
93. gng8 ENSDARG00000042970 117 1.541 - - - - - - 0.798 - 0.743 guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
94. vmhc 234 1.532 - - 0.733 - 0.799 - - - - ventricular myosin heavy chain
95. vmhcl 119 1.532 - - 0.784 - 0.748 - - - - ventricular myosin heavy chain-like
96. ascl1a ENSDARG00000038386 1290 1.52 - 0.794 - 0.726 - - - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
97. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.496 0.754 0.742 - - - - - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
98. CABZ01028287.1 CABZ01028287.1 626 1.489 - - - 0.743 - - - - 0.746
99. FCHSD2 FCHSD2 35 1.48 - 0.774 - - 0.706 - - - -
100. scn8aa ENSDARG00000005775 792 1.469 0.724 0.745 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]

There are 1717 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA