Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for helb

Gene Name Gene ID Reads Annotation
helb ENSDARG00000053127 235 helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]










Genes with expression patterns similar to helb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. helb ENSDARG00000053127 235 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
2. sostdc1a ENSDARG00000068892 127 1.847 - 0.847 - - - - 1.000 - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
3. SLC27A3 SLC27A3 240 1.685 0.830 - - 0.855 - - - - -
4. gnsa ENSDARG00000023766 545 1.681 0.847 - - 0.834 - - - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
5. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1.664 0.832 0.832 - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
6. bard1 ENSDARG00000076733 40 1.663 0.763 0.900 - - - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
7. pcdh1gb9 ENSDARG00000088475 71 1.644 - - - 0.914 - - 0.730 - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
8. grm2a ENSDARG00000004150 64 1.644 - - - 0.910 - - 0.734 - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
9. si:ch211-67e16.11 ENSDARG00000095580 635 1.634 0.790 0.844 - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
10. ppm1ab ENSDARG00000043250 772 1.632 0.773 - - 0.859 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
11. pyya ENSDARG00000053449 134 1.626 - 0.853 - - - - 0.773 - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
12. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 1.623 0.726 - - 0.897 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
13. tmem144a ENSDARG00000037409, ENSDARG00000110998, ENSDARG00000112588, ENSDARG00000116960 64 1.593 0.811 0.782 - - - - - - - transmembrane protein 144a [Source:ZFIN;Acc:ZDB-GENE-040822-12]
14. hivep1 ENSDARG00000103658 345 1.592 - - - 0.853 - 0.739 - - - human immunodeficiency virus type I enhancer binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512]
15. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 1.591 - 0.714 - 0.877 - - - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
16. NHS NHS 409 1.588 0.746 0.842 - - - - - - -
17. FP102157.1 FP102157.1 1096 1.559 - 0.767 - 0.792 - - - - -
18. CABZ01084007.1 CABZ01084007.1 199 1.492 - 0.750 - - - 0.742 - - -
19. syt4 ENSDARG00000036505 421 1.49 - - - 0.779 - - 0.711 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
20. mir203b 1077 1.474 - 0.728 - 0.746 - - - - - microRNA 203b
21. fgd6 ENSDARG00000045528 224 1.47 0.751 - - - - 0.719 - - - FYVE, RhoGEF and PH domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041210-200]
22. GIN1 GIN1 317 1.458 0.746 - - 0.712 - - - - -
23. arhgap39 ENSDARG00000100007 344 1.435 0.734 0.701 - - - - - - - Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]
24. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - - 1.000 - -
25. pax2b ENSDARG00000032578 12 1 - - - - - - 1.000 - - paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]
26. slc5a2 ENSDARG00000100919 47 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
27. si:dkey-81p22.11 ENSDARG00000093797 68 1 - - - - - - 1.000 - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
28. asb11 ENSDARG00000056561 39 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 11 [Source:ZFIN;Acc:ZDB-GENE-070112-532]
29. CU984579.1 ENSDARG00000116863 15 1 - - - - - - 1.000 - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
30. celf5 celf5 5 1 - - - - - - 1.000 - -
31. cdh10 cdh10 38 1 - - - - - - 1.000 - -
32. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 0.984 - - - - - - 0.984 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
33. lrrc4.2 ENSDARG00000003020 235 0.97 - - - - - - 0.970 - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
34. srgap2b srgap2b 80 0.964 - - - - - - 0.964 - -
35. lzts3b ENSDARG00000058558 166 0.961 - - - - - - 0.961 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
36. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.948 - - - - - - 0.948 - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
37. snx33 ENSDARG00000014954 45 0.948 - 0.948 - - - - - - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
38. agxt2 ENSDARG00000100709 799 0.944 - 0.944 - - - - - - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
39. GPR137B GPR137B 50 0.943 - - - - - - 0.943 - -
40. C8H9orf172 C8H9orf172 113 0.943 - - - 0.943 - - - - -
41. CT573468.1 CT573468.1 283 0.938 - - - 0.938 - - - - -
42. zgc:113294 ENSDARG00000032285 132 0.929 0.929 - - - - - - - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
43. slc35b1 ENSDARG00000038213 465 0.924 - 0.924 - - - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
44. LRRC45 ENSDARG00000014005 140 0.924 - 0.924 - - - - - - - leucine rich repeat containing 45 [Source:ZFIN;Acc:ZDB-GENE-121214-317]
45. mir203a 1519 0.923 - 0.923 - - - - - - - microRNA 203a
46. OTOF OTOF 195 0.916 - - - - - - 0.916 - -
47. atp8b1 ENSDARG00000060980 181 0.916 - 0.916 - - - - - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
48. NRSN2 NRSN2 57 0.915 - - - 0.915 - - - - -
49. C7H7orf43 C7H7orf43 381 0.914 - 0.914 - - - - - - -
50. lrrcc1 ENSDARG00000078535 118 0.913 - - - 0.913 - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
51. NAPB_1 NAPB_1 33 0.912 - - - 0.912 - - - - -
52. zgc:56585 ENSDARG00000026236 704 0.912 - - - 0.912 - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
53. si:dkey-93l1.9 13 0.911 - - - 0.911 - - - - - si:dkey-93l1.9
54. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.911 - - - 0.911 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
55. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 0.91 - - - 0.910 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
56. trpa1b ENSDARG00000031875 39 0.909 - - - 0.909 - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
57. tbc1d10a tbc1d10a 462 0.909 - - - 0.909 - - - - -
58. zgc:162780 ENSDARG00000069548 340 0.909 - - - 0.909 - - - - - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
59. pum2 ENSDARG00000061040 207 0.908 - - - 0.908 - - - - - pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
60. ubox5 ENSDARG00000058563 161 0.908 - - - 0.908 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
61. tmem222b ENSDARG00000104097 132 0.907 - - - 0.907 - - - - - transmembrane protein 222b [Source:ZFIN;Acc:ZDB-GENE-090303-4]
62. CCDC150 CCDC150 991 0.907 - - - - - - 0.907 - -
63. si:ch73-362m14.4 ENSDARG00000023940 88 0.907 - - - - - - 0.907 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
64. C24H16orf11 C24H16orf11 32 0.906 - - - 0.906 - - - - -
65. adar ENSDARG00000012389 520 0.906 0.906 - - - - - - - - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]
66. rxrab ENSDARG00000035127 231 0.906 - - - 0.906 - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
67. dlx6a ENSDARG00000042291 185 0.906 - 0.906 - - - - - - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
68. myo6b ENSDARG00000042141 349 0.905 - - - 0.905 - - - - - myosin VIb [Source:ZFIN;Acc:ZDB-GENE-030318-3]
69. nfil3-6 ENSDARG00000087188 150 0.904 - 0.904 - - - - - - - nuclear factor, interleukin 3 regulated, member 6 [Source:ZFIN;Acc:ZDB-GENE-040704-63]
70. itprip ENSDARG00000015576 62 0.902 - - - 0.902 - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
71. psme3 ENSDARG00000012234, ENSDARG00000111284 113 0.902 - - - 0.902 - - - - - proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]
72. olfm1a ENSDARG00000018270 107 0.902 - - - 0.902 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
73. BX324003.4 BX324003.4 24 0.902 - - - 0.902 - - - - -
74. rhbdd2 ENSDARG00000092463 937 0.901 - - - 0.901 - - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
75. ykt6 ENSDARG00000038308 473 0.901 0.901 - - - - - - - - YKT6 v-SNARE homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-733]
76. tmem187 ENSDARG00000051989 136 0.9 - - - 0.900 - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
77. klhl22 ENSDARG00000088807 324 0.9 - - - 0.900 - - - - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
78. xkr8.2 ENSDARG00000076820 51 0.899 - - - 0.899 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
79. phyh ENSDARG00000086740 88 0.899 - - - 0.899 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
80. fam110b ENSDARG00000088073 420 0.899 - - - 0.899 - - - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
81. cacna1c ENSDARG00000008398 193 0.899 - - - - - - 0.899 - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
82. polh ENSDARG00000070231, ENSDARG00000111719 154 0.899 - 0.899 - - - - - - - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
83. klc3 ENSDARG00000055965 116 0.898 - - - 0.898 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
84. gmcl1 ENSDARG00000020948 261 0.898 - - - 0.898 - - - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
85. fam169aa ENSDARG00000059719, ENSDARG00000115913 474 0.897 - - - 0.897 - - - - - family with sequence similarity 169, member Aa [Source:ZFIN;Acc:ZDB-GENE-060825-117]
86. LPL_1 LPL_1 1150 0.897 0.897 - - - - - - - -
87. ARX ARX 71 0.897 - - - 0.897 - - - - -
88. si:dkey-261e22.5 si:dkey-261e22.5 68 0.896 - - - 0.896 - - - - -
89. fam43b ENSDARG00000070222 92 0.896 - - - 0.896 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
90. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 0.895 - 0.895 - - - - - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
91. C9H2orf76 C9H2orf76 559 0.894 - - - 0.894 - - - - -
92. HS1BP3 ENSDARG00000034222 304 0.893 - 0.893 - - - - - - - HCLS1 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-391]
93. VSTM2B VSTM2B 149 0.892 - - - 0.892 - - - - -
94. ftsjd1 ftsjd1 137 0.892 - - - 0.892 - - - - -
95. zgc:174935 ENSDARG00000079255 532 0.891 - 0.891 - - - - - - - zgc:174935 [Source:ZFIN;Acc:ZDB-GENE-080204-78]
96. has3 ENSDARG00000057210, ENSDARG00000116537 108 0.891 - 0.891 - - - - - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
97. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 0.89 - 0.890 - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
98. si:ch211-89o5.3 si:ch211-89o5.3 5 0.89 - 0.890 - - - - - - -
99. zgc:173710 zgc:173710 28 0.89 - 0.890 - - - - - - -
100. zgc:114046 ENSDARG00000091728 68 0.89 - 0.890 - - - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]

There are 939 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA