Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for heatr3

Gene Name Gene ID Reads Annotation
heatr3 ENSDARG00000036076 944 HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]










Genes with expression patterns similar to heatr3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. heatr3 ENSDARG00000036076 944 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]
2. timm10 ENSDARG00000069116 4459 1.676 - - - - - - 0.774 0.902 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
3. col11a1b ENSDARG00000009014 9998 1.65 - 0.817 - - - - 0.833 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
4. usp4 ENSDARG00000014770 1684 1.647 - - - - - - 0.782 0.865 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
5. ndufaf4 ENSDARG00000077859 552 1.612 - - - - - - 0.737 0.875 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
6. reep1 ENSDARG00000014854 915 1.568 - 0.709 - - - - - 0.859 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
7. gcdh gcdh 1390 1.554 - 0.720 - - - - - 0.834 -
8. BX649282.1 ENSDARG00000105704 347 1.553 - - - - - - 0.749 0.804 -
9. ddx39b ENSDARG00000036069 1151 1.552 - 0.817 - - - - - 0.735 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]
10. mbnl1 ENSDARG00000052978 1687 1.548 - 0.803 - - - - 0.745 - - muscleblind-like splicing regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060929-704]
11. egfl7 ENSDARG00000100657 776 1.535 - 0.755 - - - - 0.780 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
12. cilp ENSDARG00000053362 1429 1.533 - - - 0.728 - - 0.805 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
13. farsb ENSDARG00000016864 6776 1.519 - - - - - - 0.727 0.792 - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
14. mrps33 ENSDARG00000020015 3551 1.518 - 0.708 - - - - 0.810 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
15. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 1.511 - 0.727 - - - - 0.784 - - cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
16. C1QBP ENSDARG00000039887 11186 1.508 - - - - - - 0.807 0.701 - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
17. rbm28 ENSDARG00000025332 2685 1.507 0.721 0.786 - - - - - - - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
18. tmem65 ENSDARG00000076393 1646 1.501 - 0.745 - - - - 0.756 - - transmembrane protein 65 [Source:ZFIN;Acc:ZDB-GENE-081022-99]
19. mrpl54 ENSDARG00000071468 2715 1.496 0.749 - - - - - 0.747 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
20. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.493 - - - - - 0.712 0.781 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
21. acat1 ENSDARG00000045888 1488 1.479 - 0.771 - - - - - 0.708 - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
22. acads ENSDARG00000030781 1669 1.475 - - - - - 0.716 0.759 - - acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64]
23. chchd3 chchd3 4139 1.471 0.722 0.749 - - - - - - -
24. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.47 0.712 - - - - - 0.758 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
25. polr1a ENSDARG00000098375 1224 1.469 0.728 - - - - - 0.741 - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
26. limch1a ENSDARG00000074275 2981 1.465 - - - 0.724 - - 0.741 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
27. smtnl1 ENSDARG00000041257 7410 1.456 - - - - - - 0.715 0.741 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
28. mrpl37 ENSDARG00000062916 1600 1.455 - - - - - - 0.736 0.719 - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
29. dyrk2 ENSDARG00000094646 2163 1.444 - - - - - - 0.731 0.713 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
30. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.435 - - - 0.721 - - 0.714 - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
31. pa2g4b ENSDARG00000070657 7999 1.429 - - - - - - 0.706 0.723 - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
32. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.416 - 0.704 - - - - 0.712 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
33. syne1a ENSDARG00000009499, ENSDARG00000116204 601 0.946 - - - - - - - 0.946 - spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
34. ZNF70_11 ZNF70_11 1246 0.945 - - - - - - - 0.945 -
35. tiprl ENSDARG00000032353 1045 0.94 - - - - - - - 0.940 - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
36. ak4 ENSDARG00000006546 1528 0.932 - - - - - - - 0.932 - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
37. adora1 adora1 149 0.92 - - - - - - - 0.920 -
38. ALPK1 195 0.914 - - - - - - - 0.914 - alpha-kinase 1
39. gtdc2 gtdc2 523 0.913 - - - - - - - 0.913 -
40. si:dkey-14k9.3 ENSDARG00000045595 256 0.911 - - - - - - - 0.911 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
41. ndp ENSDARG00000076569 120 0.909 - - - - - - 0.909 - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
42. setd1a ENSDARG00000060030 874 0.909 - - - - - - - 0.909 - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
43. setx ENSDARG00000022996 385 0.909 - - - - - - - 0.909 - senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]
44. gna13b ENSDARG00000037924 1963 0.902 - - - - - - - 0.902 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
45. par1 par1 564 0.897 - - - - - - 0.897 - -
46. rtcb ENSDARG00000101047 496 0.894 - - - - - - 0.894 - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2096]
47. casp7 ENSDARG00000091836 657 0.889 - - - - - - - 0.889 - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
48. pgm5 ENSDARG00000060745, ENSDARG00000114684 1083 0.887 - - - - - - 0.887 - - phosphoglucomutase 5 [Source:ZFIN;Acc:ZDB-GENE-060503-838]
49. bola1 ENSDARG00000039915 658 0.887 - - - - - - - 0.887 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
50. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.884 - - - - - - - 0.884 - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
51. TTF1_4 TTF1_4 504 0.882 - - - - - - - 0.882 -
52. cd248b ENSDARG00000077938 2561 0.877 - - - - - - 0.877 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
53. gps1 ENSDARG00000040650 3893 0.876 - 0.876 - - - - - - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
54. nrg2a ENSDARG00000077818 854 0.873 - - - - - - - 0.873 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
55. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.873 - - - - - - - 0.873 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
56. SHANK1 ENSDARG00000060539 102 0.873 - - - - - - - 0.873 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
57. BX005410.2 BX005410.2 44 0.872 - - - - - - - 0.872 -
58. RBM12B ENSDARG00000079717 541 0.872 - - - - - - - 0.872 - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
59. fem1c ENSDARG00000102147 336 0.872 - - - - - - 0.872 - - fem-1 homolog c (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
60. prpf4bb ENSDARG00000040310 2260 0.871 - 0.871 - - - - - - - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
61. pde6b ENSDARG00000011671 44 0.87 - - - - - - - 0.870 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
62. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.87 - - - - - - - 0.870 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
63. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.87 - - - - - - - 0.870 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
64. si:ch73-167f18.3 si:ch73-167f18.3 78 0.87 - - - - - - - 0.870 -
65. jam3a ENSDARG00000114589 630 0.87 - - - - - - - 0.870 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
66. mir130b 180 0.87 - - - - - - - 0.870 - microRNA 130b
67. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 0.87 - - - - - - 0.870 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
68. ankdd1b ENSDARG00000025866 51 0.87 - - - - - - - 0.870 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
69. hoxa4a 37 0.87 - - - - - - - 0.870 - homeobox A4a, transcript variant X4
70. si:dkey-100h21.2 si:dkey-100h21.2 30 0.87 - - - - - - - 0.870 -
71. IKZF4 ENSDARG00000037068 36 0.87 - - - - - - - 0.870 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
72. adcyap1a ENSDARG00000004015 67 0.87 - - - - - - - 0.870 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
73. GDPD4_1 GDPD4_1 190 0.869 - - - - - - - 0.869 -
74. col4a1 ENSDARG00000055009 3083 0.868 - - - - - - 0.868 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
75. spef2 ENSDARG00000098330 59 0.868 - - - - - - - 0.868 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
76. fzd4 ENSDARG00000104117 842 0.868 - - - - - - 0.868 - - frizzled class receptor 4 [Source:ZFIN;Acc:ZDB-GENE-990415-217]
77. pus7 ENSDARG00000031774 195 0.868 - - - - - - - 0.868 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
78. akt2 ENSDARG00000011219 647 0.867 - - - - - - - 0.867 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
79. rpgra ENSDARG00000056617 77 0.867 - - - - - - - 0.867 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
80. si:dkey-219c3.2 ENSDARG00000075805 619 0.867 - - - - - - 0.867 - - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
81. mea1 ENSDARG00000039820 589 0.867 - - - - - - - 0.867 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
82. rhogb ENSDARG00000004301 358 0.866 - - - - - - - 0.866 - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
83. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.866 - - - - - - - 0.866 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
84. MAP7 MAP7 98 0.866 - - - - - - - 0.866 -
85. VDAC3 ENSDARG00000003695 34 0.865 - - - - - - - 0.865 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
86. si:dkey-157e10.7 si:dkey-157e10.7 105 0.865 - - - - - - - 0.865 -
87. p2rx3b ENSDARG00000029718 105 0.865 - - - - - - - 0.865 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
88. CWC15 ENSDARG00000013382 8969 0.865 - 0.865 - - - - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
89. nrxn2b ENSDARG00000063150 343 0.865 - - - - - - - 0.865 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
90. si:dkey-17e6.2 si:dkey-17e6.2 72 0.864 - - - - - - - 0.864 -
91. pard3 pard3 161 0.864 - - - - - - - 0.864 -
92. tarsl2 ENSDARG00000092774 505 0.864 - - - - - - - 0.864 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
93. dclk1a ENSDARG00000018856 177 0.864 - - - - - - - 0.864 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
94. RBM26 ENSDARG00000104130 1012 0.863 - - - - - - - 0.863 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
95. aatkb ENSDARG00000104442 392 0.863 - - - - - - - 0.863 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
96. ANGPT4 ENSDARG00000076787 140 0.863 - - - - - - - 0.863 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
97. COMP 2018 0.863 - - - - - - 0.863 - - cartilage oligomeric matrix protein, transcript variant X1
98. KBTBD13_1 KBTBD13_1 116 0.863 - - - - - - - 0.863 -
99. b3galtla b3galtla 111 0.862 - - - - - - - 0.862 -
100. foxc1a ENSDARG00000091481 1059 0.862 - - - - - - 0.862 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]

There are 843 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA