Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hddc3

Gene Name Gene ID Reads Annotation
hddc3 ENSDARG00000020473 2814 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]










Genes with expression patterns similar to hddc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hddc3 ENSDARG00000020473 2814 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
2. nup98 ENSDARG00000074955 3998 1.975 - - - - - - 0.977 - 0.998 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
3. hoxa10b ENSDARG00000031337 3992 1.918 - - - - - - 0.932 - 0.986 homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
4. nup155 ENSDARG00000001777 3417 1.905 - - - - - - - 0.907 0.998 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
5. tmed7 ENSDARG00000046022 2435 1.873 - - - - - - - 0.874 0.999 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
6. cdc42bpb ENSDARG00000019383 5976 1.814 - - - - - - 0.831 - 0.983 CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
7. insm1b ENSDARG00000053301 2032 1.806 - - - - - - 0.954 0.852 - insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
8. tmeff1b ENSDARG00000056740 11253 1.788 - - - - - - - 0.825 0.963 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
9. vta1 ENSDARG00000013732 6072 1.785 - - - - - - - 0.794 0.991 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
10. ppapdc1b ppapdc1b 2866 1.764 - - - - - - 0.975 0.789 -
11. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.758 - 0.759 - - - - - - 0.999 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
12. stk35l ENSDARG00000057497 3582 1.752 - - - - - 0.796 - 0.956 - serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
13. syne2b ENSDARG00000053484 9225 1.73 - 0.758 - - - - - - 0.972 spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
14. mbd3a ENSDARG00000061774 4047 1.721 - - - - - 0.762 0.959 - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
15. olfm1b ENSDARG00000014053 1392 1.717 - 0.769 - - - - - 0.948 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
16. dnajc5gb ENSDARG00000017687, ENSDARG00000111738 855 1.702 0.730 - - - - - 0.972 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b [Source:ZFIN;Acc:ZDB-GENE-040426-1238]
17. CWC15 ENSDARG00000013382 8969 1.699 - 0.744 - - - - 0.955 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
18. xpo1b ENSDARG00000063229 2529 1.698 - - - - - - 0.978 0.720 - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
19. prpf31 ENSDARG00000095904 526 1.671 - - - 0.717 - - - 0.954 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
20. aldh3b1 ENSDARG00000013839 796 1.65 - 0.772 - - - - - 0.878 - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
21. histh1l ENSDARG00000035519 12293 1.647 - - - - - - 0.866 0.781 - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
22. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 1.645 - 0.733 - - - - - 0.912 - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
23. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.62 - - - - - 0.723 - 0.897 - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
24. srrm1 ENSDARG00000001244 4972 1.604 - - - - - 0.760 - 0.844 - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
25. arpp19b ENSDARG00000039880 4823 1.595 - - - - - 0.730 - 0.865 - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
26. sumo2b ENSDARG00000102741 18514 1.592 - - - - - - 0.765 0.827 - small ubiquitin-like modifier 2b [Source:ZFIN;Acc:ZDB-GENE-040801-7]
27. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.564 - - - - - 0.744 - 0.820 - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
28. hat1 ENSDARG00000034916 5712 1.557 - 0.778 - - - 0.779 - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
29. timm23 timm23 2712 1.542 - 0.794 - - - 0.748 - - -
30. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.457 - 0.748 - - - 0.709 - - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
31. wu:fb55g09 6015 1.429 0.704 0.725 - - - - - - - wu:fb55g09
32. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.999 - - - - - - - - 0.999 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
33. NDST1 NDST1 1584 0.999 - - - - - - - - 0.999
34. spag1a ENSDARG00000004017 1140 0.999 - - - - - - - - 0.999 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
35. polr3k ENSDARG00000037835 1552 0.999 - - - - - - - - 0.999 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
36. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.999 - - - - - - - - 0.999 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
37. jam2b ENSDARG00000079071 1031 0.999 - - - - - - - - 0.999 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
38. tsen2 ENSDARG00000091851 1467 0.999 - - - - - - - - 0.999 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
39. C24H7orf50 1417 0.999 - - - - - - - - 0.999 chromosome 24 C7orf50 homolog, transcript variant X2
40. acbd6 ENSDARG00000039456 2355 0.999 - - - - - - - - 0.999 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
41. cnrip1a ENSDARG00000091683 1491 0.999 - - - - - - - - 0.999 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
42. serpinb1 ENSDARG00000055416 1320 0.999 - - - - - - - - 0.999 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
43. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.999 - - - - - - - - 0.999 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
44. jam3a ENSDARG00000114589 630 0.999 - - - - - - - - 0.999 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
45. smyd5 ENSDARG00000071669 1194 0.999 - - - - - - - - 0.999 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
46. kbtbd12 ENSDARG00000001882 1196 0.999 - - - - - - - - 0.999 kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
47. BX296557.2 BX296557.2 1083 0.999 - - - - - - - - 0.999
48. NRD1 NRD1 3486 0.999 - - - - - - - - 0.999
49. agpat9 agpat9 938 0.999 - - - - - - - - 0.999
50. zgc:162967 zgc:162967 2132 0.999 - - - - - - - - 0.999
51. gltscr1 gltscr1 1487 0.999 - - - - - - - - 0.999
52. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.999 - - - - - - - - 0.999 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
53. TRIM65 ENSDARG00000077098 991 0.999 - - - - - - - - 0.999 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
54. vsnl1a ENSDARG00000023228 1584 0.999 - - - - - - - - 0.999 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
55. cdk5r1b ENSDARG00000045087 2075 0.999 - - - - - - - - 0.999 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
56. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 0.999 - - - - - - - - 0.999 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
57. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.999 - - - - - - - - 0.999 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
58. prpf39 ENSDARG00000100209 3721 0.998 - - - - - - - - 0.998 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
59. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.998 - - - - - - - - 0.998 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
60. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.998 - - - - - - - - 0.998 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
61. BX957337.1 BX957337.1 1685 0.998 - - - - - - - - 0.998
62. ash1l ENSDARG00000070981 2520 0.998 - - - - - - - - 0.998 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
63. gata3 ENSDARG00000016526 1857 0.998 - - - - - - - - 0.998 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
64. mtmr9 ENSDARG00000015860 1339 0.998 - - - - - - - - 0.998 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
65. foxp2 ENSDARG00000005453 1504 0.997 - - - - - - - - 0.997 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
66. ubqln4 ENSDARG00000052975 6453 0.996 - - - - - - - - 0.996 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
67. rnf115 ENSDARG00000062450 1284 0.995 - - - - - - - - 0.995 ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
68. mier1b ENSDARG00000001447 1680 0.995 - - - - - - - - 0.995 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
69. naa15a ENSDARG00000003213 5889 0.995 - - - - - - - - 0.995 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
70. ndufa2 ENSDARG00000021984 4754 0.995 - - - - - - - - 0.995 NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
71. igfbp5b ENSDARG00000025348 3803 0.995 - - - - - - - - 0.995 insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
72. BAZ2B BAZ2B 3285 0.995 - - - - - - - - 0.995
73. eya2 ENSDARG00000018984 1768 0.995 - - - - - - - - 0.995 EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
74. stip1 ENSDARG00000004906 7742 0.994 - - - - - - - - 0.994 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
75. nid1a ENSDARG00000068710 3948 0.993 - - - - - - - - 0.993 nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
76. zgc:195001 ENSDARG00000070484 3281 0.993 - - - - - - - - 0.993 zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
77. C1QBP ENSDARG00000039887 11186 0.992 - - - - - - - - 0.992 complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
78. atp5mf ENSDARG00000037867 11052 0.99 - - - - - - - - 0.990 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
79. zgc:77816 zgc:77816 800 0.99 - - - - - - - - 0.990
80. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.99 - - - - - - - - 0.990 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
81. apex1 ENSDARG00000045843 6345 0.99 - - - - - - - - 0.990 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
82. CNDP1 CNDP1 6456 0.989 - - - - - - - - 0.989
83. sh3bgrl3 ENSDARG00000098075 3071 0.989 - - - - - - 0.989 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
84. myh10 ENSDARG00000000103 7522 0.988 - - - - - - - - 0.988 myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
85. Sep-12 Sep-12 1828 0.988 - - - - - - 0.988 - -
86. pfdn4 ENSDARG00000061228 8266 0.988 - - - - - - - - 0.988 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
87. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 0.988 - - - - - - - - 0.988 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
88. cnih4 ENSDARG00000087759 3937 0.986 - - - - - - - - 0.986 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
89. snrpd1 ENSDARG00000011648 8615 0.986 - - - - - - - - 0.986 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
90. fam3c ENSDARG00000056152 3833 0.985 - - - - - - 0.985 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
91. arid1aa ENSDARG00000101710 3644 0.985 - - - - - - 0.985 - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
92. phax ENSDARG00000044298 2302 0.984 - - - - - - 0.984 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
93. junbb ENSDARG00000104773 2536 0.984 - - - - - - 0.984 - - JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
94. kdm1a ENSDARG00000060679 6152 0.983 - - - - - - - - 0.983 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
95. alpi.1 ENSDARG00000015273 1712 0.983 - - - - - - 0.983 - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
96. jph1b ENSDARG00000038826 7416 0.982 - - - - - - - - 0.982 junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
97. RAPGEF2 ENSDARG00000005482 2068 0.982 - - - - - - 0.982 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
98. ckap5 ENSDARG00000102674 5068 0.982 - - - - - - - - 0.982 cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
99. nt5c3a ENSDARG00000058597 14299 0.982 - - - - - - - - 0.982 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
100. RNF144B ENSDARG00000024940 1559 0.982 - - - - - - 0.982 - - ring finger protein 144B [Source:ZFIN;Acc:ZDB-GENE-040426-1292]

There are 881 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA