Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hcfc2

Gene Name Gene ID Reads Annotation
hcfc2 ENSDARG00000058127 490 host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]










Genes with expression patterns similar to hcfc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hcfc2 ENSDARG00000058127 490 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
2. ccnh ENSDARG00000007657 745 2.329 - 0.737 - 0.777 - - - 0.815 - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
3. SHISA9 SHISA9 154 1.717 - 0.889 - 0.828 - - - - -
4. acp6 ENSDARG00000040064 197 1.63 - 0.809 - 0.821 - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
5. GPR180 73 1.628 - - - 0.843 - - 0.785 - - G protein-coupled receptor 180, transcript variant X2
6. NHSL1 NHSL1 182 1.627 - - - 0.836 - - - 0.791 -
7. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.619 - 0.773 - 0.846 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
8. knstrn ENSDARG00000074379 374 1.615 - - - - - - 0.723 0.892 - kinetochore localized astrin (SPAG5) binding protein [Source:ZFIN;Acc:ZDB-GENE-081022-187]
9. FBXL3 FBXL3 1769 1.605 - - - 0.874 - 0.731 - - -
10. anapc1 ENSDARG00000075687 488 1.603 0.763 - - 0.840 - - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
11. CABZ01072607.1 ENSDARG00000113761 784 1.602 - - - - - - 0.805 0.797 - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
12. dixdc1b ENSDARG00000056267 307 1.588 - - - 0.825 - - 0.763 - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
13. mctp2a ENSDARG00000001414 307 1.587 - 0.761 - 0.826 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
14. bbs4 ENSDARG00000063522 247 1.586 - - - 0.817 - - - 0.769 - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
15. vav3a ENSDARG00000086623 498 1.577 - - - - - 0.799 - 0.778 - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
16. setd1a ENSDARG00000060030 874 1.572 - 0.790 - - - - 0.782 - - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
17. C11H19orf25 C11H19orf25 491 1.568 - - - 0.805 - - - 0.763 -
18. lrrc23 ENSDARG00000006174 234 1.564 - - - - - - 0.739 0.825 - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
19. col12a1a ENSDARG00000078322 1833 1.558 0.808 - - - - 0.750 - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
20. znf750 ENSDARG00000102267 327 1.549 - 0.808 - - - - - 0.741 - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
21. znhit2 ENSDARG00000030805 197 1.544 0.710 - - 0.834 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
22. SYNGAP1_1 SYNGAP1_1 66 1.541 - - - 0.836 - - 0.705 - -
23. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.533 - - - 0.792 - - 0.741 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
24. msto1 ENSDARG00000024381 298 1.528 - - - - - 0.800 0.728 - - misato 1, mitochondrial distribution and morphology regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6238]
25. gtf2a2 ENSDARG00000053685, ENSDARG00000109493, ENSDARG00000113094 515 1.526 0.740 - - 0.786 - - - - - general transcription factor IIA, 2 [Source:ZFIN;Acc:ZDB-GENE-050522-513]
26. slc9a5 ENSDARG00000078560 76 1.525 - - - - - 0.771 - 0.754 - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
27. tmem63a ENSDARG00000031956 112 1.523 0.765 - - - - 0.758 - - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
28. rwdd3 ENSDARG00000057315 289 1.522 - 0.815 - - - - - 0.707 - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
29. RNASEH2C ENSDARG00000089637 1673 1.521 - - - 0.801 - 0.720 - - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
30. dgcr14 1608 1.52 - - - 0.795 - - 0.725 - - DiGeorge syndrome critical region gene 14
31. ankra2 ENSDARG00000035399, ENSDARG00000111289 1303 1.512 0.774 - - - - - - 0.738 - ankyrin repeat, family A (RFXANK-like), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2141]
32. C12H17orf62_1 C12H17orf62_1 83 1.502 0.752 - - - - - - 0.750 -
33. nol6 ENSDARG00000059711, ENSDARG00000115621 853 1.502 - - - - - 0.710 0.792 - - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
34. dnase2 ENSDARG00000073893 141 1.491 0.771 - - - - - 0.720 - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
35. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.49 - - - - - - 0.710 0.780 - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
36. bmb ENSDARG00000096603 120 1.459 - 0.709 - - - - - 0.750 - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
37. CCDC117 CCDC117 412 1.458 - - - - - - 0.736 0.722 -
38. brms1 ENSDARG00000051955 900 1.457 - - - 0.744 - 0.713 - - - BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
39. epb41l4a ENSDARG00000040087 1013 1.456 - - - 0.713 - 0.743 - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
40. sh3tc2 ENSDARG00000089917 415 1.453 0.719 0.734 - - - - - - - SH3 domain and tetratricopeptide repeats 2 [Source:ZFIN;Acc:ZDB-GENE-081104-347]
41. nrp2a_1 ENSDARG00000096546 3358 1.449 - 0.731 - - - 0.718 - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
42. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.429 - - - 0.728 - - 0.701 - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
43. nfkbiz ENSDARG00000102097 218 1.412 0.703 - - - - - - 0.709 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta [Source:ZFIN;Acc:ZDB-GENE-071024-1]
44. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 0.933 - - - 0.933 - - - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
45. wdhd1 ENSDARG00000015998 775 0.918 - - - 0.918 - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
46. mtor ENSDARG00000053196 2156 0.913 - - - 0.913 - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
47. msh6 ENSDARG00000104541 197 0.91 - 0.910 - - - - - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
48. sgce ENSDARG00000012138 912 0.908 - - - 0.908 - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
49. zfand1 ENSDARG00000009178, ENSDARG00000114617 1192 0.906 - - - 0.906 - - - - - zinc finger, AN1-type domain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-269]
50. si:dkey-43f9.4 si:dkey-43f9.4 180 0.904 0.904 - - - - - - - -
51. dcaf12 ENSDARG00000063155 697 0.902 - - - 0.902 - - - - - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
52. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.898 - - - 0.898 - - - - - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
53. atxn7l3 ENSDARG00000029331 531 0.896 - - - 0.896 - - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
54. CR548626.3 CR548626.3 423 0.895 - - - 0.895 - - - - -
55. rab23 ENSDARG00000004151 1077 0.887 - - - 0.887 - - - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
56. als2b ENSDARG00000076924 738 0.887 - - - 0.887 - - - - - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
57. anapc7 ENSDARG00000063005 1139 0.885 - - - 0.885 - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
58. nek6 ENSDARG00000037963 316 0.883 - - - 0.883 - - - - - NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
59. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 0.881 - - - 0.881 - - - - - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
60. smad5 ENSDARG00000037238 1684 0.88 - - - - - - - 0.880 - SMAD family member 5 [Source:ZFIN;Acc:ZDB-GENE-990603-9]
61. supt20 ENSDARG00000078658 713 0.876 - - - 0.876 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
62. AL772300.3 AL772300.3 1752 0.876 0.876 - - - - - - - -
63. C13H2orf50 C13H2orf50 87 0.876 - - - - - - - 0.876 -
64. CACHD1 ENSDARG00000061590 1287 0.874 - - - 0.874 - - - - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
65. TMEM179B ENSDARG00000069495 1074 0.874 - - - - - 0.874 - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
66. C10H11orf63 C10H11orf63 65 0.873 - - - - - - - 0.873 -
67. rabl5 rabl5 245 0.871 - - - - - - - 0.871 -
68. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.871 - - - 0.871 - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
69. usp42 ENSDARG00000077300 926 0.87 - - - 0.870 - - - - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
70. cnot8 ENSDARG00000020043 866 0.87 - - - 0.870 - - - - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
71. cwc25 ENSDARG00000003382 2134 0.87 - - - 0.870 - - - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
72. adam23a ENSDARG00000062323 580 0.869 - - - 0.869 - - - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
73. ncana 1537 0.868 - - - - - - - 0.868 - neurocan a
74. slc25a38a ENSDARG00000059805 236 0.867 0.867 - - - - - - - - solute carrier family 25, member 38a [Source:ZFIN;Acc:ZDB-GENE-060929-320]
75. RBBP8NL RBBP8NL 813 0.867 - - - 0.867 - - - - -
76. RBM26 ENSDARG00000104130 1012 0.866 - - - 0.866 - - - - - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
77. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 0.866 - - - 0.866 - - - - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
78. mrpl44 ENSDARG00000094277 1778 0.865 - - - 0.865 - - - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
79. uroc1 ENSDARG00000070394 357 0.864 0.864 - - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
80. BX571949.1 BX571949.1 293 0.863 - - - - - - - 0.863 -
81. CABZ01085888.1 CABZ01085888.1 868 0.863 - - - 0.863 - - - - -
82. srrm2 ENSDARG00000037965 1967 0.861 - - - 0.861 - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
83. suv420h2 2186 0.861 - - - 0.861 - - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
84. uo:ion006 uo:ion006 56 0.861 - - - - - - - 0.861 -
85. pou5f3 ENSDARG00000044774 212 0.861 - - - - - - - 0.861 - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
86. FAM83H FAM83H 190 0.86 - 0.860 - - - - - - -
87. alkbh4 ENSDARG00000052247 306 0.86 - 0.860 - - - - - - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
88. dnajc18 ENSDARG00000056005 8084 0.86 - - - 0.860 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
89. atg4b ENSDARG00000052104 758 0.859 - - - 0.859 - - - - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
90. orc3 ENSDARG00000008805 444 0.859 - - - 0.859 - - - - - origin recognition complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6247]
91. MLLT1 MLLT1 349 0.858 - - - - - - - 0.858 -
92. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 0.857 - - - 0.857 - - - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
93. dcp1a ENSDARG00000100136 714 0.856 - - - 0.856 - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
94. hpdb ENSDARG00000044935, ENSDARG00000115001 75 0.856 - - - - - - - 0.856 - 4-hydroxyphenylpyruvate dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-040808-62]
95. ECI2 ENSDARG00000102412 848 0.856 - - - 0.856 - - - - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
96. gnpnat1 ENSDARG00000039892 709 0.856 - - - 0.856 - - - - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
97. GNAL ENSDARG00000045415 568 0.855 - - - 0.855 - - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
98. ARHGEF12 ARHGEF12 392 0.854 - - - 0.854 - - - - -
99. phf10 ENSDARG00000070084 1210 0.854 - - - 0.854 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
100. kirrel3l ENSDARG00000104665 499 0.854 - - - - - - 0.854 - - kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]

There are 1210 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA