Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hcfc1a

Gene Name Gene ID Reads Annotation
hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]










Genes with expression patterns similar to hcfc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
2. snx18b ENSDARG00000044246, ENSDARG00000110012 51 2.61 1.000 - 0.759 - - - 0.851 - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
3. tesk2 ENSDARG00000061450 261 2.313 - 0.767 - - - 0.829 0.717 - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
4. retsatl ENSDARG00000034989 41 1.918 - 0.932 - - - 0.986 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
5. PEG3_40 PEG3_40 186 1.909 - 0.935 - - - 0.974 - - -
6. si:dkey-264b2.3 19 1.905 - 0.957 - - - 0.948 - - - si:dkey-264b2.3, transcript variant X2
7. dbpa ENSDARG00000063014 107 1.888 - 0.957 - - - 0.931 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
8. CU638738.1 CU638738.1 131 1.864 - 0.901 - - - 0.963 - - -
9. CT030046.1 CT030046.1 190 1.857 - 0.978 - - - 0.879 - - -
10. BX004890.2 BX004890.2 84 1.852 - - 0.878 - - 0.974 - - -
11. cldn11a ENSDARG00000020031 284 1.852 - 0.978 - - - - 0.874 - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
12. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.839 - - - - - 0.986 0.853 - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
13. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.831 - 0.957 - - - - 0.874 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
14. polm ENSDARG00000103470 49 1.825 - - 0.951 - - - 0.874 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
15. kcnn1a ENSDARG00000091306 95 1.816 0.881 - - - - 0.935 - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
16. serpinb1l2 ENSDARG00000070396 37 1.816 - - 0.942 - - - 0.874 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
17. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1.811 - - - - 0.937 - 0.874 - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
18. CU929225.1 CU929225.1 104 1.811 - 0.937 - - - - 0.874 - -
19. tmeff1a ENSDARG00000008191 74 1.81 - 0.969 0.841 - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
20. zbtb38 ENSDARG00000100607 17 1.794 - 0.969 - - 0.825 - - - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
21. rad21b ENSDARG00000035655 87 1.787 - - - - - 0.887 0.900 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
22. naif1 ENSDARG00000062753 176 1.784 - 0.873 - - - 0.911 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
23. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.779 - 0.954 - - - - 0.825 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
24. tenm1 ENSDARG00000003403 148 1.775 - 0.880 - - - 0.895 - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
25. CABZ01030262.1 CABZ01030262.1 11 1.774 - - - - 0.790 0.984 - - -
26. gcdhl gcdhl 38 1.769 - 0.978 - - - - 0.791 - -
27. vps13d ENSDARG00000017986 183 1.768 - - 0.906 - - - 0.862 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
28. CU856359.2 CU856359.2 182 1.764 0.881 - - - - 0.883 - - -
29. samsn1a ENSDARG00000054543 28 1.763 - 0.978 - - - - 0.785 - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
30. mlxip ENSDARG00000059474 12 1.759 - 0.969 - - 0.790 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
31. BX470254.1_1 ENSDARG00000097402 50 1.759 - - - - 0.786 0.973 - - -
32. traip ENSDARG00000011262 410 1.753 - 0.967 - - - 0.786 - - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
33. CLDND1_1 CLDND1_1 50 1.751 - - 0.877 - - - 0.874 - -
34. dpysl4 ENSDARG00000103490 534 1.744 0.804 - - - - 0.940 - - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
35. st6galnac5a ENSDARG00000039220 76 1.741 - - 0.893 - - 0.848 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
36. CR388231.1 ENSDARG00000098710 153 1.741 - 0.844 - - - 0.897 - - -
37. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.737 - 0.860 - - - 0.877 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
38. RAPH1 RAPH1 294 1.73 - - 0.745 - - 0.985 - - -
39. cpeb1a ENSDARG00000045932 81 1.729 - - - - - 0.845 0.884 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
40. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.727 - 0.978 - - - 0.749 - - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
41. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.72 - 0.972 - - - 0.748 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
42. atat1 ENSDARG00000004472 700 1.716 0.747 - - - - 0.969 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
43. LSM5 ENSDARG00000071573 371 1.715 - 0.853 - - - 0.862 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
44. rprmb ENSDARG00000024006 120 1.715 - 0.898 0.817 - - - - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
45. fabp11a_1 ENSDARG00000017299 387 1.711 - 0.833 - - - 0.878 - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
46. SNORA62 SNORA62 39 1.705 - 0.910 - - 0.795 - - - -
47. KIF21A_1 KIF21A_1 237 1.705 - 0.819 - - - 0.886 - - -
48. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.703 0.919 - - - - 0.784 - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
49. rergla ENSDARG00000019396 42 1.7 0.714 0.986 - - - - - - - RERG/RAS-like a [Source:ZFIN;Acc:ZDB-GENE-040718-198]
50. CABZ01073795.1 ENSDARG00000010729 52 1.692 - 0.753 - - - 0.939 - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
51. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.692 - 0.938 - - - 0.754 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
52. aven ENSDARG00000002894 49 1.689 - - 0.815 - - - 0.874 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
53. faah2a ENSDARG00000008457, ENSDARG00000112163 87 1.689 0.881 - - - - - 0.808 - - fatty acid amide hydrolase 2a [Source:ZFIN;Acc:ZDB-GENE-040718-453]
54. fmnl1a ENSDARG00000055713 57 1.689 - 0.978 - - - - - - 0.711 formin-like 1a [Source:ZFIN;Acc:ZDB-GENE-120215-83]
55. zgc:171566 ENSDARG00000105118 340 1.687 - - - - - 0.914 0.773 - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
56. CDC42BPA CDC42BPA 295 1.683 - - - - - 0.935 0.748 - -
57. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.681 - 0.737 - - - 0.944 - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
58. FP102071.1 ENSDARG00000097994 170 1.678 0.701 - - - - 0.977 - - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
59. BACH1 BACH1 1021 1.678 - 0.889 - - - 0.789 - - -
60. GLIPR1 GLIPR1 37 1.672 - - 0.912 - - - 0.760 - -
61. glra1 ENSDARG00000012019 315 1.671 - - 0.867 - - 0.804 - - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
62. si:dkeyp-79c2.1 42 1.665 - - 0.768 - - 0.897 - - - si:dkeyp-79c2.1, transcript variant X2
63. si:dkey-13i19.10 si:dkey-13i19.10 2 1.664 - - - - 0.790 - 0.874 - -
64. CR788316.4 ENSDARG00000105829 297 1.661 - 0.907 - - - - 0.754 - - neoverrucotoxin subunit beta-like [Source:NCBI gene;Acc:100004951]
65. si:dkeyp-53d3.6 204 1.657 - - - - - 0.765 0.892 - - si:dkeyp-53d3.6, transcript variant X1
66. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.652 - - - - - 0.881 0.771 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
67. si:dkey-270b7.1 si:dkey-270b7.1 83 1.647 - 0.731 - - - 0.916 - - -
68. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.647 - 0.717 - - - 0.930 - - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
69. camk4 ENSDARG00000005372 118 1.642 - 0.923 - - - - 0.719 - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
70. capslb ENSDARG00000003414 77 1.64 - 0.766 - - - - 0.874 - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
71. shank3b ENSDARG00000063054 148 1.639 - 0.730 0.909 - - - - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
72. nsmce1 ENSDARG00000098780 289 1.63 - 0.832 - - - 0.798 - - - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
73. PDGFB_1 PDGFB_1 139 1.622 - 0.835 - - - - 0.787 - -
74. ints3 ENSDARG00000016811 339 1.621 - 0.750 - - - 0.871 - - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
75. si:dkey-100n10.2 101 1.619 0.719 - - - - 0.900 - - - si:dkey-100n10.2
76. bpnt1 ENSDARG00000043684 78 1.619 - 0.803 - - - - 0.816 - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
77. BX530066.1 BX530066.1 42 1.618 0.910 0.708 - - - - - - -
78. znf516 ENSDARG00000070809 65 1.616 - 0.858 - 0.758 - - - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
79. CABZ01066957.1 CABZ01066957.1 161 1.613 - 0.829 - - - 0.784 - - -
80. CR759921.2 CR759921.2 583 1.611 - 0.841 - - - 0.770 - - -
81. si:dkey-117n7.4 ENSDARG00000092064 22 1.609 - 0.808 - 0.801 - - - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
82. kcnn1b ENSDARG00000023546 152 1.602 - 0.788 - - - 0.814 - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
83. TULP3 TULP3 433 1.595 - 0.803 - - - 0.792 - - -
84. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.585 - 0.713 - - - 0.872 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
85. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1.575 - - - - 0.790 - 0.785 - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
86. syngr1a ENSDARG00000002564 209 1.571 0.712 - - - - 0.859 - - - synaptogyrin 1a [Source:ZFIN;Acc:ZDB-GENE-041010-169]
87. ccdc78 ENSDARG00000030095 8 1.566 - - - - - - 0.760 - 0.806 coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
88. EML6 250 1.566 - 0.743 - - - 0.823 - - - echinoderm microtubule associated protein like 6
89. DIDO1 ENSDARG00000057940 312 1.564 - 0.841 0.723 - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
90. ubxn2a ENSDARG00000087180 152 1.556 - 0.713 - - - 0.843 - - - UBX domain protein 2A [Source:ZFIN;Acc:ZDB-GENE-110411-202]
91. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.552 - 0.821 0.731 - - - - - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
92. efnb2b ENSDARG00000074050 77 1.549 - - 0.714 - - - 0.835 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
93. erfl3 ENSDARG00000062801 149 1.543 - 0.787 - - - 0.756 - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
94. shox2 ENSDARG00000075713 104 1.542 - - - - 0.751 0.791 - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
95. ccr8.1 ENSDARG00000095789 14 1.541 - 0.806 - 0.735 - - - - - chemokine (C-C motif) receptor 8.1 [Source:ZFIN;Acc:ZDB-GENE-070302-1]
96. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1.539 - - - - 0.790 - - - 0.749 peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
97. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.536 - 0.724 - - - 0.812 - - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
98. ern1 ENSDARG00000013997 473 1.536 - 0.742 - - - 0.794 - - - endoplasmic reticulum to nucleus signaling 1 [Source:ZFIN;Acc:ZDB-GENE-050522-431]
99. lpar2a ENSDARG00000042338 285 1.529 - - - - - 0.799 0.730 - - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
100. itga11a ENSDARG00000036086, ENSDARG00000111495 254 1.525 0.821 - - - - 0.704 - - - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]

There are 2141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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