Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hccs

Gene Name Gene ID Reads Annotation
hccs hccs 1758










Genes with expression patterns similar to hccs

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hccs hccs 1758 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ing5b ENSDARG00000068175 2502 2.668 - 0.990 - - 0.955 0.723 - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
3. scube2 ENSDARG00000037362 2833 2.66 0.739 0.987 - - 0.934 - - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
4. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 2.605 - 0.995 0.882 - - 0.728 - - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
5. tiprl ENSDARG00000032353 1045 2.53 - 0.993 - - - 0.709 - 0.828 - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
6. sdhdb ENSDARG00000030139 9761 2.499 - 0.875 - - 0.817 0.807 - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
7. pno1 ENSDARG00000008502 4547 2.37 - - - - 0.911 - 0.715 0.744 - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
8. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.973 - 0.994 - - 0.979 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
9. SRGAP3 ENSDARG00000060309 5353 1.895 - 0.955 - - 0.940 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
10. rpl7l1 ENSDARG00000042864 3256 1.863 - 0.971 - - 0.892 - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
11. acadvl ENSDARG00000016687 5329 1.863 - 0.984 - - 0.879 - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
12. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.827 - 0.995 0.832 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
13. wu:fb12e11 wu:fb12e11 2332 1.821 - 0.995 - - - 0.826 - - -
14. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.816 - - 0.839 - 0.977 - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
15. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.792 - 0.986 0.806 - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
16. med14 ENSDARG00000009953 1383 1.785 - - - - 0.975 - - 0.810 - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
17. mrps33 ENSDARG00000020015 3551 1.78 - - - - 0.973 - 0.807 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
18. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.775 - 0.975 - - 0.800 - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
19. CASK CASK 1750 1.768 - 0.995 0.773 - - - - - -
20. ndufa11 ENSDARG00000042777 2757 1.745 - - 0.773 - 0.972 - - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
21. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.743 - - - - 0.942 - - 0.801 - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
22. ptcd3 ENSDARG00000103856 2107 1.741 - 0.985 - - - - 0.756 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
23. dnajc15 ENSDARG00000038309 1274 1.739 0.767 - - - 0.972 - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
24. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.736 - - - - 0.936 - 0.800 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
25. usp16 ENSDARG00000060633 684 1.735 0.752 - - - 0.983 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
26. FP236813.1 FP236813.1 1842 1.735 - 0.991 0.744 - - - - - -
27. klf6a ENSDARG00000029072 3758 1.725 - 0.995 0.730 - - - - - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
28. zc3h15 ENSDARG00000015889 3861 1.722 - 0.993 0.729 - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
29. ctdspl2b ENSDARG00000060586 1682 1.722 0.755 - - - 0.967 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
30. pdap1b ENSDARG00000002967 2159 1.711 - 0.986 - - - 0.725 - - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
31. cnep1r1 ENSDARG00000036064 1440 1.703 - - 0.723 - 0.980 - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
32. hoxa10b ENSDARG00000031337 3992 1.702 0.726 0.976 - - - - - - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
33. snoU83B snoU83B 4666 1.698 - 0.984 - - - - 0.714 - -
34. amot ENSDARG00000078335 1757 1.695 - 0.994 - - - - - 0.701 - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
35. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.695 - 0.994 0.701 - - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
36. C18H11orf58 C18H11orf58 1293 1.695 - - 0.828 - - - - 0.867 -
37. C9H2orf47 C9H2orf47 2036 1.694 - - - - 0.972 - - 0.722 -
38. znf385a ENSDARG00000009899 3433 1.694 - 0.962 0.732 - - - - - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
39. aspg ENSDARG00000052942 1406 1.693 - - - - 0.984 0.709 - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
40. mrps15 ENSDARG00000109289 3258 1.689 - - - - 0.960 - 0.729 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
41. nop16 ENSDARG00000044402 3645 1.689 - 0.979 - - - 0.710 - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
42. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.689 0.714 0.975 - - - - - - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
43. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.688 - - 0.838 - - - - 0.850 - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
44. srgap1 srgap1 2320 1.683 - - 0.714 - 0.969 - - - -
45. vbp1 ENSDARG00000030241 10619 1.681 - - 0.716 - 0.965 - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
46. UBE2QL1 ENSDARG00000079276 3474 1.678 0.704 - - - 0.974 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
47. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.67 0.728 0.942 - - - - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
48. syap1 ENSDARG00000012946 3560 1.65 - 0.943 0.707 - - - - - - synapse associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-917]
49. surf6 ENSDARG00000035427 1695 1.649 - - - - - 0.775 - 0.874 - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
50. supt6h ENSDARG00000006524 3221 1.643 - - 0.701 - 0.942 - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
51. cdkn1c cdkn1c 17427 1.636 0.737 0.899 - - - - - - -
52. atp6v1e1b ENSDARG00000030694 5452 1.635 - 0.729 - - 0.906 - - - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
53. TTF1_4 TTF1_4 504 1.627 - - - - - 0.804 - 0.823 -
54. cdk2ap2 ENSDARG00000103145 8024 1.626 - 0.815 - - 0.811 - - - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
55. git2a ENSDARG00000061915 884 1.623 0.786 - - - - - - 0.837 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
56. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.622 - - - - 0.879 - 0.743 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
57. si:ch73-173m3.3 si:ch73-173m3.3 425 1.616 - - 0.842 - - - - 0.774 -
58. ddx56 ENSDARG00000020913 1070 1.611 - - - 0.752 - - - 0.859 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
59. vps25 ENSDARG00000059079 3747 1.611 - 0.835 - 0.776 - - - - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
60. lysmd1 ENSDARG00000054789 277 1.6 - - - - - 0.809 - 0.791 - LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]
61. SCARF2 1117 1.599 - - 0.859 - - - 0.740 - - scavenger receptor class F, member 2
62. ERO1LB ERO1LB 1433 1.593 - - 0.814 - - - - 0.779 -
63. RBM26 ENSDARG00000104130 1012 1.593 0.782 - - - - - - 0.811 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
64. agfg1b ENSDARG00000019526 472 1.589 - - 0.835 - - - 0.754 - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
65. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.586 - - 0.803 - - - 0.783 - - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
66. cox7c ENSDARG00000104537 12169 1.585 - - - - 0.851 0.734 - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
67. zgc:194839 ENSDARG00000078550 4003 1.584 - 0.816 0.768 - - - - - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
68. CYP27A1_1 CYP27A1_1 329 1.56 - - 0.837 - - - 0.723 - -
69. zgc:110333 ENSDARG00000040628 3250 1.554 - 0.852 0.702 - - - - - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
70. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.55 - - 0.828 - - 0.722 - - -
71. atp5j 4272 1.544 - - - - - 0.739 0.805 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
72. ralgps2 ENSDARG00000026519 1610 1.542 - - 0.723 - - - - 0.819 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
73. aimp1 ENSDARG00000060036 5343 1.54 - - - - - 0.796 0.744 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
74. cct3 ENSDARG00000016173 15869 1.539 0.745 0.794 - - - - - - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
75. PPP1R8 PPP1R8 1897 1.536 - - 0.767 - - - 0.769 - -
76. wu:fk48d07 wu:fk48d07 13245 1.527 0.701 0.826 - - - - - - -
77. CR559945.3 CR559945.3 1029 1.526 - - - - - 0.708 - 0.818 -
78. mrps25 ENSDARG00000041306 3654 1.519 - - 0.756 - - - - 0.763 - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
79. enkur ENSDARG00000031248 427 1.519 - - 0.792 - - 0.727 - - - enkurin, TRPC channel interacting protein [Source:ZFIN;Acc:ZDB-GENE-070718-1]
80. ndufb3 ENSDARG00000075709 6609 1.516 - - - - - 0.766 0.750 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
81. eif2s1b ENSDARG00000052178 11961 1.513 - 0.730 - - 0.783 - - - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
82. acsl1 acsl1 4216 1.507 0.745 - - - - 0.762 - - -
83. mrpl22 ENSDARG00000109961 1374 1.496 - - - - - 0.773 0.723 - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
84. phb ENSDARG00000057414 9551 1.494 0.749 - - - - - 0.745 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
85. ndufs6 ENSDARG00000056583 7220 1.492 - - - - - 0.740 0.752 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
86. hmbsa ENSDARG00000008840 2601 1.491 - - - - - 0.752 0.739 - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
87. ndufv1 ENSDARG00000036438 8437 1.484 0.743 - - - - 0.741 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
88. CABZ01028296.1 CABZ01028296.1 6203 1.478 0.744 - 0.734 - - - - - -
89. esrrga ENSDARG00000004861 805 1.475 0.758 - - - - 0.717 - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
90. col4a2 ENSDARG00000104110 947 1.467 - - - - - 0.754 0.713 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
91. sod2 ENSDARG00000042644 1382 1.462 - - - - - 0.711 0.751 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
92. si:ch211-51e12.7 ENSDARG00000045914 9598 1.449 - 0.739 - - 0.710 - - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
93. crls1 ENSDARG00000038000 1088 1.443 0.702 - - - - - 0.741 - - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
94. gypc ENSDARG00000041546 1487 1.427 0.717 - - - - - 0.710 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
95. mrpl36 ENSDARG00000070607 4069 1.422 - - - - - 0.718 0.704 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
96. cdkn3 ENSDARG00000039130 1051 0.998 - 0.998 - - - - - - - cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
97. rock1 ENSDARG00000058993 2603 0.997 - 0.997 - - - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
98. PDPR ENSDARG00000103288 711 0.997 - 0.997 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
99. uck2a ENSDARG00000006074 1554 0.997 - 0.997 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
100. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.997 - 0.997 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]

There are 1428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA