Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hbbe3

Gene Name Gene ID Reads Annotation
hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]










Genes with expression patterns similar to hbbe3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
2. si:busm1-118j2.5 si:busm1-118j2.5 10462 5.558 0.920 0.879 0.964 0.924 0.942 - - 0.929 -
3. hbae3 ENSDARG00000079305 100050 5.248 0.874 0.830 0.743 0.941 0.968 - - 0.892 - hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
4. hbbe1.1 ENSDARG00000113599 64815 4.496 0.917 0.850 - 0.879 0.889 - - 0.961 - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
5. hbbe1.1_1 ENSDARG00000113599 31704 4.264 - - 0.792 0.867 0.942 0.706 - 0.957 - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
6. hbae1 14666 4.151 0.780 0.795 0.919 - 0.905 - - 0.752 - hemoglobin, alpha embryonic 1
7. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 3.793 0.759 0.803 - 0.741 0.750 - - 0.740 - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
8. slc4a1a ENSDARG00000012881 8972 3.669 - 0.870 0.953 0.926 - - - 0.920 - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
9. AL935210.1 ENSDARG00000088330 24618 3.616 - - 0.935 0.905 0.935 - - 0.841 - hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
10. hbae1_1 37308 3.5 - 0.895 0.936 0.719 0.950 - - - - hemoglobin, alpha embryonic 1
11. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 3.44 - 0.871 0.918 0.855 - - - 0.796 - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
12. gata1a ENSDARG00000013477, ENSDARG00000117116 902 3.405 - 0.780 0.907 0.850 0.868 - - - - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
13. urod ENSDARG00000006818 856 3.357 - 0.865 0.863 0.809 0.820 - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
14. epb41b ENSDARG00000029019 1472 3.352 - 0.859 0.862 - 0.858 - - 0.773 - erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
15. HBQ1 HBQ1 413 3.261 0.871 0.737 0.839 - 0.814 - - - -
16. klfd klfd 625 3.151 0.743 - 0.757 0.827 0.824 - - - -
17. klf4b klf4b 533 3.084 - 0.760 0.835 0.745 0.744 - - - -
18. nmt1b ENSDARG00000057206 654 3.013 - 0.735 0.753 0.798 0.727 - - - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
19. cahz ENSDARG00000011166 5771 2.545 - 0.831 0.905 - 0.809 - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
20. si:dkey-25o16.2 1990 2.517 - 0.846 0.890 - - - - 0.781 - si:dkey-25o16.2, transcript variant X1
21. hmbsb ENSDARG00000055991 3037 2.481 - 0.825 0.874 - 0.782 - - - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
22. nt5c2l1 ENSDARG00000034852 1014 2.453 - 0.834 - 0.819 - - - 0.800 - 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
23. hbz 327 2.417 - 0.786 0.751 0.880 - - - - - hemoglobin subunit zeta
24. rhd ENSDARG00000002194 269 2.417 0.841 - 0.737 0.839 - - - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
25. blvrb ENSDARG00000096829 3296 2.406 - - 0.840 0.798 - - - 0.768 - biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
26. rfesd ENSDARG00000058725 339 2.335 0.794 - - 0.824 0.717 - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
27. epor_1 ENSDARG00000090834 366 2.284 - 0.732 0.762 0.790 - - - - - erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
28. hmbsa ENSDARG00000008840 2601 2.184 - 0.710 0.759 0.715 - - - - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
29. mir451a 131 1.663 0.916 - - 0.747 - - - - - microRNA 451a
30. ppox ENSDARG00000102167 929 1.596 - 0.770 0.826 - - - - - - protoporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-051120-90]
31. blf ENSDARG00000043126 433 1.584 - 0.821 - - 0.763 - - - - bloody fingers [Source:ZFIN;Acc:ZDB-GENE-050721-1]
32. mpx ENSDARG00000019521 562 1.576 0.871 - - 0.705 - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
33. tubb1 ENSDARG00000053066 364 1.544 - - 0.702 0.842 - - - - - tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
34. si:dkey-269i1.3 18775 1.52 - - 0.717 0.803 - - - - - si:dkey-269i1.3
35. wu:fa26c03 18714 1.52 - - 0.727 0.793 - - - - - wu:fa26c03
36. si:dkey-269i1.2 si:dkey-269i1.2 6364 1.513 - - 0.711 0.802 - - - - -
37. cdc37l1 ENSDARG00000044265 360 1.512 0.728 0.784 - - - - - - - cell division cycle 37-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8865]
38. KEL ENSDARG00000076950 159 1.51 - - - 0.764 - - - 0.746 - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
39. smyd2b ENSDARG00000005629 8181 1.503 - 0.759 - - - - 0.744 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
40. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.495 - 0.752 - - - - 0.743 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
41. hbaa1 ENSDARG00000097011 58 1.492 - - - 0.735 0.757 - - - - hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
42. si:ch73-248e21.7 ENSDARG00000096331 176 1.491 - - - - 0.779 - - 0.712 - si:ch73-248e21.7 [Source:ZFIN;Acc:ZDB-GENE-120215-231]
43. plac8l1 ENSDARG00000069031 161 1.479 - - 0.743 0.736 - - - - - PLAC8-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-165]
44. vbp1 ENSDARG00000030241 10619 1.471 - 0.730 - - - - 0.741 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
45. CABZ01074946.1 CABZ01074946.1 119 1.459 - 0.720 0.739 - - - - - -
46. RHOBTB3 RHOBTB3 319 1.451 0.713 0.738 - - - - - - -
47. AMPD2 AMPD2 1723 1.434 - - 0.723 - - - - 0.711 -
48. zgc:174855 ENSDARG00000094559 33515 1.409 - - 0.706 0.703 - - - - - zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
49. fbxo15 ENSDARG00000016897 18 0.927 0.927 - - - - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
50. hcrtr2 ENSDARG00000023722 70 0.927 0.927 - - - - - - - - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
51. ugt5e1 ENSDARG00000058048 25 0.927 0.927 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
52. aqp7 ENSDARG00000026787 37 0.927 0.927 - - - - - - - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
53. ZNF408 ENSDARG00000036043 232 0.927 0.927 - - - - - - - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
54. npnt ENSDARG00000018721 19 0.927 0.927 - - - - - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
55. ddx46 ENSDARG00000099458 24 0.927 0.927 - - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
56. eng2b eng2b 865 0.927 0.927 - - - - - - - -
57. LARP4 LARP4 48 0.916 0.916 - - - - - - - -
58. smyd4 ENSDARG00000060983 106 0.916 0.916 - - - - - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
59. zgc:113426 ENSDARG00000051793 37 0.891 0.891 - - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
60. TESK1 TESK1 109 0.89 0.890 - - - - - - - -
61. nsun3 ENSDARG00000013023 136 0.888 0.888 - - - - - - - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
62. tek ENSDARG00000028663 167 0.882 0.882 - - - - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
63. gfi1aa ENSDARG00000020746 30 0.879 0.879 - - - - - - - - growth factor independent 1A transcription repressor a [Source:ZFIN;Acc:ZDB-GENE-050522-534]
64. AL954137.2 ENSDARG00000114408 104506 0.876 - - - - - - 0.876 - -
65. adra1d ENSDARG00000024101 387 0.873 0.873 - - - - - - - - adrenoceptor alpha 1D [Source:ZFIN;Acc:ZDB-GENE-090312-203]
66. zbtb25 ENSDARG00000042383 94 0.871 0.871 - - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
67. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 0.871 0.871 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
68. ENSDARG00000029805 ENSDARG00000029805 4 0.871 0.871 - - - - - - - -
69. pias4b ENSDARG00000042215 12 0.871 0.871 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
70. si:dkey-16n15.6 ENSDARG00000095805 18 0.871 0.871 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
71. BX571880.1 ENSDARG00000097533 499 0.871 0.871 - - - - - - - -
72. MPZL2 MPZL2 31 0.871 0.871 - - - - - - - -
73. sema6e ENSDARG00000000189 35 0.871 0.871 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
74. znf142 ENSDARG00000061373 47 0.871 0.871 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
75. si:dkey-56m15.8 ENSDARG00000098426 2 0.871 0.871 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
76. lcn15 ENSDARG00000067851 140 0.871 0.871 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
77. APEX2 ENSDARG00000008472 7 0.871 0.871 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
78. shpk ENSDARG00000002355 84 0.871 0.871 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
79. si:dkey-284p5.3 ENSDARG00000095638 4 0.871 0.871 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
80. MUC5AC_1 MUC5AC_1 381 0.871 0.871 - - - - - - - -
81. FP085392.1 FP085392.1 12 0.871 0.871 - - - - - - - -
82. gpr39 ENSDARG00000102888 46 0.871 0.871 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
83. FP102192.1 ENSDARG00000101104 32 0.871 0.871 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
84. si:dkey-30j10.5 ENSDARG00000093186 13 0.871 0.871 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
85. arid5a ENSDARG00000077120 26 0.871 0.871 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
86. epm2a ENSDARG00000059044 10 0.871 0.871 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
87. SMCHD1 ENSDARG00000104374 2 0.871 0.871 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
88. ME1 ENSDARG00000053215 8 0.871 0.871 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
89. dnm3 dnm3 45 0.871 0.871 - - - - - - - -
90. rac1l ENSDARG00000054649, ENSDARG00000096549 2 0.871 0.871 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
91. nrros ENSDARG00000071491, ENSDARG00000112102 64 0.871 0.871 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
92. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 0.871 0.871 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
93. si:ch211-73m21.2 si:ch211-73m21.2 5 0.871 0.871 - - - - - - - -
94. rxrga ENSDARG00000005593 342 0.871 0.871 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
95. fermt3b ENSDARG00000030938 17 0.871 0.871 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
96. cdkn1bb_1 ENSDARG00000054271 5 0.871 0.871 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
97. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 0.871 0.871 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
98. CABZ01080224.1 CABZ01080224.1 1 0.871 0.871 - - - - - - - -
99. prf1.3 ENSDARG00000001572 1 0.871 0.871 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
100. si:ch211-155o21.4 ENSDARG00000096567 25 0.871 0.871 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]

There are 627 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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