Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hbbe2

Gene Name Gene ID Reads Annotation
hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]










Genes with expression patterns similar to hbbe2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
2. si:busm1-118j2.5 si:busm1-118j2.5 10462 5.276 - 0.885 0.910 0.896 - 0.941 - 0.863 0.781
3. AL935210.1 ENSDARG00000088330 24618 4.455 - - 0.851 0.867 - 0.987 - 0.858 0.892 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
4. hbbe1.1 ENSDARG00000113599 64815 4.396 - 0.839 - 0.810 - - 0.952 0.862 0.933 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
5. gata1a ENSDARG00000013477, ENSDARG00000117116 902 4.321 - 0.820 0.807 0.864 - 0.955 - - 0.875 GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
6. hbae3 ENSDARG00000079305 100050 4.273 - 0.752 - 0.865 - 0.981 - 0.762 0.913 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
7. slc4a1a ENSDARG00000012881 8972 4.19 - 0.875 0.849 0.902 - - - 0.702 0.862 solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
8. si:dkey-25o16.2 1990 4.178 - 0.829 0.760 - 0.878 - - 0.813 0.898 si:dkey-25o16.2, transcript variant X1
9. nt5c2l1 ENSDARG00000034852 1014 4.114 - 0.756 - 0.822 - 0.933 - 0.741 0.862 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
10. epb41b ENSDARG00000029019 1472 3.453 - 0.855 0.746 - - 0.958 - - 0.894 erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
11. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 3.44 - 0.871 0.918 0.855 - - - 0.796 - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
12. klfd klfd 625 3.398 0.856 - - 0.817 - 0.854 - - 0.871
13. hbz 327 3.218 - 0.866 0.777 0.815 - 0.760 - - - hemoglobin subunit zeta
14. hbbe1.1_1 ENSDARG00000113599 31704 3.125 - - 0.722 0.807 - - - 0.858 0.738 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
15. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 3.04 - 0.793 - 0.729 - 0.740 - 0.778 - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
16. hbae1 14666 2.748 - 0.910 0.876 - - 0.962 - - - hemoglobin, alpha embryonic 1
17. hbae1_1 37308 2.651 - 0.942 0.867 - - - - - 0.842 hemoglobin, alpha embryonic 1
18. cahz ENSDARG00000011166 5771 2.627 - 0.917 0.833 - - - - - 0.877 carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
19. epor_1 ENSDARG00000090834 366 2.532 - - - 0.757 - 0.927 - - 0.848 erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
20. hmbsb ENSDARG00000055991 3037 2.515 - 0.871 0.779 - - - - - 0.865 hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
21. urod ENSDARG00000006818 856 2.509 - 0.856 0.836 0.817 - - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
22. ppox ENSDARG00000102167 929 2.49 - 0.904 0.775 - - - - - 0.811 protoporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-051120-90]
23. rhd ENSDARG00000002194 269 2.331 - - 0.711 0.710 - 0.910 - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
24. klf4b klf4b 533 2.315 - 0.795 0.768 0.752 - - - - -
25. nmt1b ENSDARG00000057206 654 2.224 - 0.736 - 0.775 - - - - 0.713 N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
26. rfesd ENSDARG00000058725 339 2.19 - - 0.705 0.761 - - - - 0.724 Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
27. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.797 - 0.798 - - - - 0.999 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
28. ryr1a ENSDARG00000011422 2377 1.769 - 0.770 - - - - 0.999 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
29. vcl vcl 6667 1.762 - 0.766 - - - - 0.996 - -
30. ncl ENSDARG00000002710 16951 1.758 - 0.762 - - - - 0.996 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
31. rnd3a ENSDARG00000076799 4705 1.75 - 0.751 - - - - 0.999 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
32. atp5h 18018 1.697 - 0.709 - - - - 0.988 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
33. she ENSDARG00000087956 941 1.596 0.829 0.767 - - - - - - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
34. mrpl27 ENSDARG00000032985 2158 1.577 - 0.843 - - 0.734 - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
35. HBQ1 HBQ1 413 1.554 - 0.784 - - - - - - 0.770
36. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.527 - - - 0.780 - - - - 0.747 homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
37. blvrb ENSDARG00000096829 3296 1.52 - - 0.737 0.783 - - - - - biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
38. RFWD3 ENSDARG00000087752 167 1.516 - 0.753 - - - 0.763 - - - ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
39. brd7 ENSDARG00000008380 3654 1.513 - 0.785 - - 0.728 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
40. hmbsa ENSDARG00000008840 2601 1.511 - 0.755 0.756 - - - - - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
41. chrng ENSDARG00000086647 676 1.506 - 0.764 - - - 0.742 - - - cholinergic receptor, nicotinic, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-3805]
42. uros ENSDARG00000027491 1147 1.504 - 0.707 - - - - - - 0.797 uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
43. nfic ENSDARG00000043210 266 1.494 - 0.752 - - - 0.742 - - - nuclear factor I/C [Source:ZFIN;Acc:ZDB-GENE-080305-2]
44. aqp8b_1 ENSDARG00000089749 586 1.493 0.757 - - - - 0.736 - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
45. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 1.489 - - - 0.769 - - - - 0.720 homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
46. gp1bb ENSDARG00000074441 116 1.483 - - 0.779 0.704 - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
47. adrb3a ENSDARG00000053646 354 1.477 - - - 0.774 - - - - 0.703 adrenoceptor beta 3a [Source:ZFIN;Acc:ZDB-GENE-080917-21]
48. nfe2 ENSDARG00000020606 224 1.474 - 0.774 - 0.700 - - - - - nuclear factor, erythroid 2 [Source:ZFIN;Acc:ZDB-GENE-030124-1]
49. ddx49 ENSDARG00000012899 1604 1.471 - 0.749 - - 0.722 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
50. si:ch73-299h12.1 ENSDARG00000102321 233 1.462 - - - 0.738 - 0.724 - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
51. cdkn2aipnl ENSDARG00000053395 5107 1.452 - 0.733 - - 0.719 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
52. mrpl12 ENSDARG00000038768 5539 1.408 - 0.706 - - 0.702 - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
53. cenpf ENSDARG00000055133 5267 0.999 - - - - - - 0.999 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
54. ttll4 ENSDARG00000078935 1663 0.999 - - - - - - 0.999 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
55. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.999 - - - - - - 0.999 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
56. si:dkey-184p9.7 ENSDARG00000092726 2679 0.999 - - - - - - 0.999 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
57. CCNA2 ENSDARG00000011094 3996 0.999 - - - - - - 0.999 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
58. oafa ENSDARG00000075851 2015 0.999 - - - - - - 0.999 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
59. cx44.1 cx44.1 799 0.999 - - - - - - 0.999 - -
60. slc7a4 ENSDARG00000068286 1693 0.999 - - - - - - 0.999 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
61. PREX2 ENSDARG00000071692 827 0.999 - - - - - - 0.999 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
62. lepre1 lepre1 5346 0.999 - - - - - - 0.999 - -
63. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 0.999 - - - - - - 0.999 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
64. hoxc10a ENSDARG00000070348 2323 0.999 - - - - - - 0.999 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
65. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.999 - - - - - - 0.999 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
66. NDUFB2 ENSDARG00000045490 9141 0.999 - - - - - - 0.999 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
67. LMLN ENSDARG00000061265 1618 0.999 - - - - - - 0.999 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
68. pcif1 ENSDARG00000099084 2851 0.999 - - - - - - 0.999 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
69. fam160a1 fam160a1 1445 0.999 - - - - - - 0.999 - -
70. rtf1 ENSDARG00000008947 6596 0.999 - - - - - - 0.999 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
71. SNORD33 SNORD33 3284 0.999 - - - - - - 0.999 - -
72. CR847934.1 CR847934.1 2658 0.999 - - - - - - 0.999 - -
73. TSG101 TSG101 1686 0.999 - - - - - - 0.999 - -
74. pdlim5b ENSDARG00000027600 4252 0.999 - - - - - - 0.999 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
75. CR388095.3 CR388095.3 2548 0.999 - - - - - - 0.999 - -
76. rfxap ENSDARG00000076891 1299 0.999 - - - - - - 0.999 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
77. slc4a2b ENSDARG00000052330 1900 0.999 - - - - - - 0.999 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
78. plagl2 ENSDARG00000076657 2057 0.999 - - - - - - 0.999 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
79. gcn1l1 gcn1l1 6031 0.999 - - - - - - 0.999 - -
80. FAT1 FAT1 689 0.999 - - - - - - 0.999 - -
81. pinx1 ENSDARG00000023532 4452 0.999 - - - - - - 0.999 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
82. lhfpl2b_1 ENSDARG00000098153 1596 0.998 - - - - - - 0.998 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
83. aldh7a1 ENSDARG00000018426 4637 0.998 - - - - - - 0.998 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
84. dct ENSDARG00000006008 2466 0.998 - - - - - - 0.998 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
85. wwp2 ENSDARG00000061345 3459 0.998 - - - - - - 0.998 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
86. alcamb ENSDARG00000058538 5672 0.998 - - - - - - 0.998 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
87. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.997 - - - - - - 0.997 - -
88. atp6ap1b ENSDARG00000037153 3970 0.997 - - - - - - 0.997 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
89. ABHD12B ABHD12B 1877 0.997 - - - - - - 0.997 - -
90. si:ch211-51e12.7 ENSDARG00000045914 9598 0.996 - - - - - - 0.996 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
91. purbb ENSDARG00000103546 4983 0.996 - - - - - - 0.996 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
92. jagn1b ENSDARG00000014995 2063 0.996 - - - - - - 0.996 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
93. ptprfb ENSDARG00000005754 7178 0.995 - - - - - - 0.995 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
94. lfng ENSDARG00000037879 11783 0.995 - - - - - - 0.995 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
95. ist1 ENSDARG00000051888 4536 0.994 - - - - - - 0.994 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
96. ostc ENSDARG00000104901 16240 0.992 - - - - - - 0.992 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
97. si:ch211-160e1.5 5586 0.991 - - - - - - 0.991 - - si:ch211-160e1.5
98. SNORD72 SNORD72 4018 0.991 - - - - - - 0.991 - -
99. sgms1 ENSDARG00000029621 6376 0.989 - - - - - - 0.989 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
100. myh10 ENSDARG00000000103 7522 0.986 - - - - - - 0.986 - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]

There are 900 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA