Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hbbe1.1

Gene Name Gene ID Reads Annotation
hbbe1.1 ENSDARG00000113599 64815 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]










Genes with expression patterns similar to hbbe1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hbbe1.1 ENSDARG00000113599 64815 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
2. si:busm1-118j2.5 si:busm1-118j2.5 10462 5.4 0.959 0.907 - 0.905 0.919 - - 0.961 0.749
3. hbae3 ENSDARG00000079305 100050 5.279 0.832 - 0.751 0.939 0.924 - - 0.923 0.910 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
4. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 4.496 0.917 0.850 - 0.879 0.889 - - 0.961 - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
5. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 4.396 - 0.839 - 0.810 - - 0.952 0.862 0.933 hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
6. slc4a1a ENSDARG00000012881 8972 4.231 0.754 0.860 - 0.886 - - - 0.857 0.874 solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
7. hbae1 14666 3.966 0.833 0.794 - 0.704 0.837 - - 0.798 - hemoglobin, alpha embryonic 1
8. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 3.961 0.816 0.836 - 0.750 0.781 - - 0.778 - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
9. AL935210.1 ENSDARG00000088330 24618 3.454 - - - 0.851 0.839 - - 0.893 0.871 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
10. hbbe1.1_1 ENSDARG00000113599 31704 3.396 - - - 0.809 0.910 - - 0.960 0.717 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
11. nt5c2l1 ENSDARG00000034852 1014 3.318 - 0.780 - 0.815 - - - 0.840 0.883 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
12. gata1a ENSDARG00000013477, ENSDARG00000117116 902 3.196 - 0.732 - 0.832 0.787 - - - 0.845 GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
13. HBQ1 HBQ1 413 3.141 0.845 - - - 0.807 - - 0.751 0.738
14. klfd klfd 625 3.122 0.739 - - 0.818 0.756 - - - 0.809
15. hbae1_1 37308 2.722 - 0.893 - - 0.913 - - - 0.916 hemoglobin, alpha embryonic 1
16. epb41b ENSDARG00000029019 1472 2.513 - 0.846 - - 0.796 - - - 0.871 erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
17. si:dkey-25o16.2 1990 2.502 - 0.815 - - - - - 0.844 0.843 si:dkey-25o16.2, transcript variant X1
18. hmbsb ENSDARG00000055991 3037 2.458 - 0.825 - - 0.796 - - - 0.837 hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
19. cahz ENSDARG00000011166 5771 2.421 - 0.797 - - 0.777 - - - 0.847 carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
20. urod ENSDARG00000006818 856 2.344 - 0.822 - 0.774 0.748 - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
21. klf4b klf4b 533 2.298 - 0.821 - 0.702 0.775 - - - -
22. rhd ENSDARG00000002194 269 2.249 0.818 - - 0.727 0.704 - - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
23. nmt1b ENSDARG00000057206 654 2.131 - 0.712 - 0.709 - - - - 0.710 N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
24. vcl vcl 6667 1.713 - 0.765 - - - - 0.948 - -
25. ryr1a ENSDARG00000011422 2377 1.692 - 0.751 - - - - 0.941 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
26. ncl ENSDARG00000002710 16951 1.691 - 0.751 - - - - 0.940 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
27. atp5h 18018 1.658 - 0.710 - - - - 0.948 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
28. mir451a 131 1.641 0.908 - - 0.733 - - - - - microRNA 451a
29. CU914813.1 CU914813.1 29656 1.571 - - - - - 0.728 0.843 - -
30. hbz 327 1.571 - 0.754 - 0.817 - - - - - hemoglobin subunit zeta
31. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.536 - - - 0.792 - - - - 0.744 homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
32. epor_1 ENSDARG00000090834 366 1.534 - - - 0.723 - - - - 0.811 erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
33. pygma ENSDARG00000055518 15972 1.524 - 0.731 0.793 - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
34. grpel2 ENSDARG00000069421 5673 1.51 - 0.709 - - - 0.801 - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
35. smyd1b ENSDARG00000091253 4964 1.502 - 0.709 0.793 - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
36. rfesd ENSDARG00000058725 339 1.501 0.764 - - 0.737 - - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
37. ppox ENSDARG00000102167 929 1.489 - 0.715 - - - - - - 0.774 protoporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-051120-90]
38. blvrb ENSDARG00000096829 3296 1.474 - - - 0.754 - - - 0.720 - biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
39. cdc37l1 ENSDARG00000044265 360 1.466 0.738 0.728 - - - - - - - cell division cycle 37-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8865]
40. slc39a5 ENSDARG00000079525 2157 1.461 - - - - - - - 0.713 0.748 solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
41. foxc1b ENSDARG00000055398 1499 1.449 0.732 0.717 - - - - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
42. tie1 ENSDARG00000004105 400 1.441 0.721 0.720 - - - - - - - tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-990415-55]
43. uros ENSDARG00000027491 1147 1.427 - 0.712 - - - - - - 0.715 uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
44. aldh7a1 ENSDARG00000018426 4637 0.949 - - - - - - 0.949 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
45. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.945 - - - - - - 0.945 - -
46. tmod4 ENSDARG00000020890 17436 0.943 - - - - - - 0.943 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
47. NDUFB2 ENSDARG00000045490 9141 0.94 - - - - - - 0.940 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
48. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.94 - - - - - - 0.940 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
49. wwp2 ENSDARG00000061345 3459 0.94 - - - - - - 0.940 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
50. dct ENSDARG00000006008 2466 0.939 - - - - - - 0.939 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
51. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 0.939 - - - - - - 0.939 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
52. lepre1 lepre1 5346 0.939 - - - - - - 0.939 - -
53. oafa ENSDARG00000075851 2015 0.939 - - - - - - 0.939 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
54. CCNA2 ENSDARG00000011094 3996 0.939 - - - - - - 0.939 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
55. plagl2 ENSDARG00000076657 2057 0.939 - - - - - - 0.939 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
56. pdlim5b ENSDARG00000027600 4252 0.939 - - - - - - 0.939 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
57. rtf1 ENSDARG00000008947 6596 0.939 - - - - - - 0.939 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
58. SNORD33 SNORD33 3284 0.939 - - - - - - 0.939 - -
59. hoxc10a ENSDARG00000070348 2323 0.938 - - - - - - 0.938 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
60. fbxo15 ENSDARG00000016897 18 0.938 0.938 - - - - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
61. rnd3a ENSDARG00000076799 4705 0.938 - - - - - - 0.938 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
62. PREX2 ENSDARG00000071692 827 0.938 - - - - - - 0.938 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
63. hcrtr2 ENSDARG00000023722 70 0.938 0.938 - - - - - - - - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
64. si:dkey-184p9.7 ENSDARG00000092726 2679 0.938 - - - - - - 0.938 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
65. ttll4 ENSDARG00000078935 1663 0.938 - - - - - - 0.938 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
66. aqp7 ENSDARG00000026787 37 0.938 0.938 - - - - - - - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
67. pinx1 ENSDARG00000023532 4452 0.938 - - - - - - 0.938 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
68. ugt5e1 ENSDARG00000058048 25 0.938 0.938 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
69. npnt ENSDARG00000018721 19 0.938 0.938 - - - - - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
70. rfxap ENSDARG00000076891 1299 0.938 - - - - - - 0.938 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
71. gcn1l1 gcn1l1 6031 0.938 - - - - - - 0.938 - -
72. ZNF408 ENSDARG00000036043 232 0.938 0.938 - - - - - - - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
73. ddx46 ENSDARG00000099458 24 0.938 0.938 - - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
74. CR847934.1 CR847934.1 2658 0.938 - - - - - - 0.938 - -
75. fam160a1 fam160a1 1445 0.938 - - - - - - 0.938 - -
76. eng2b eng2b 865 0.938 0.938 - - - - - - - -
77. LMLN ENSDARG00000061265 1618 0.937 - - - - - - 0.937 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
78. pcif1 ENSDARG00000099084 2851 0.937 - - - - - - 0.937 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
79. slc7a4 ENSDARG00000068286 1693 0.937 - - - - - - 0.937 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
80. cx44.1 cx44.1 799 0.937 - - - - - - 0.937 - -
81. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.937 - - - - - - 0.937 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
82. FAT1 FAT1 689 0.937 - - - - - - 0.937 - -
83. slc4a2b ENSDARG00000052330 1900 0.937 - - - - - - 0.937 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
84. TSG101 TSG101 1686 0.937 - - - - - - 0.937 - -
85. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.937 - - - - - - 0.937 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
86. purbb ENSDARG00000103546 4983 0.936 - - - - - - 0.936 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
87. cenpf ENSDARG00000055133 5267 0.936 - - - - - - 0.936 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
88. CR388095.3 CR388095.3 2548 0.936 - - - - - - 0.936 - -
89. si:ch211-51e12.7 ENSDARG00000045914 9598 0.935 - - - - - - 0.935 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
90. lhfpl2b_1 ENSDARG00000098153 1596 0.935 - - - - - - 0.935 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
91. alcamb ENSDARG00000058538 5672 0.935 - - - - - - 0.935 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
92. atp6ap1b ENSDARG00000037153 3970 0.934 - - - - - - 0.934 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
93. SNORD72 SNORD72 4018 0.933 - - - - - - 0.933 - -
94. jagn1b ENSDARG00000014995 2063 0.933 - - - - - - 0.933 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
95. ABHD12B ABHD12B 1877 0.932 - - - - - - 0.932 - -
96. lfng ENSDARG00000037879 11783 0.932 - - - - - - 0.932 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
97. ostc ENSDARG00000104901 16240 0.932 - - - - - - 0.932 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
98. ist1 ENSDARG00000051888 4536 0.929 - - - - - - 0.929 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
99. ptprfb ENSDARG00000005754 7178 0.929 - - - - - - 0.929 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
100. si:ch211-160e1.5 5586 0.928 - - - - - - 0.928 - - si:ch211-160e1.5

There are 690 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA