Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for h3f3d

Gene Name Gene ID Reads Annotation
h3f3d ENSDARG00000045248 43757 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]










Genes with expression patterns similar to h3f3d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. h3f3d ENSDARG00000045248 43757 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
2. nono ENSDARG00000020482, ENSDARG00000115783 12482 3.316 - - 0.802 0.844 - 0.851 - 0.819 - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
3. zgc:112425 zgc:112425 293873 3.217 0.815 - - 0.709 - 0.804 - 0.889 -
4. sumo3a ENSDARG00000028119 13447 3.062 - 0.706 - 0.739 - 0.897 - 0.720 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
5. rbm4.3 ENSDARG00000022129 28571 2.618 - - - - - 0.815 0.963 0.840 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
6. hnrnpab hnrnpab 72354 2.576 - - - - - 0.892 0.860 0.824 -
7. fubp1 ENSDARG00000029248 15259 2.527 - - - 0.801 - - 0.988 0.738 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
8. hnrnpm ENSDARG00000061735 19428 2.504 - - - 0.784 - - 0.965 0.755 - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
9. pcdh1gc5 ENSDARG00000104826 10052 2.407 - - - 0.799 - 0.835 - 0.773 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
10. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.406 - - - 0.755 - 0.881 - 0.770 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
11. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.319 - - - 0.733 - 0.857 - 0.729 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
12. tma7 ENSDARG00000071670 13372 2.211 - - 0.790 - - 0.709 - 0.712 - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
13. hsp90ab1 ENSDARG00000029150 102372 2.178 0.707 - 0.747 - - - - 0.724 - heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
14. kif5aa ENSDARG00000098936 2428 1.834 - - - - - 0.853 0.981 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
15. seta ENSDARG00000031495 39977 1.833 0.887 - - - - 0.946 - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
16. zbtb18 ENSDARG00000028228 3653 1.82 - - - - - 0.839 0.981 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
17. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.8 - - - 0.815 - - 0.985 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
18. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.797 - - - - - - 0.990 0.807 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
19. dynll1 ENSDARG00000058454 33932 1.783 - 0.820 - - - - 0.963 - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
20. CAMK2G CAMK2G 3537 1.766 - - - - - 0.783 0.983 - -
21. igfbp1a ENSDARG00000099351 1717 1.76 - - - - - 0.780 0.980 - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
22. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.759 - - - - - - 0.985 - 0.774 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
23. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.747 - - - - - - 0.978 - 0.769 aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
24. si:dkey-126g1.9 ENSDARG00000093702 7832 1.744 - 0.791 - - - - 0.953 - - si:dkey-126g1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-9862]
25. vamp1 ENSDARG00000031283 3094 1.701 - - - - - 0.717 0.984 - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
26. mapre1b ENSDARG00000002659 9119 1.7 - - - - - - 0.986 0.714 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
27. hnrnpub ENSDARG00000004735 16496 1.687 - - - 0.763 - 0.924 - - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
28. SLC29A4 ENSDARG00000059690 470 1.681 - - - - - 0.702 0.979 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
29. hmgb3a ENSDARG00000056725 15668 1.673 - - 0.879 - - 0.794 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
30. cfl1 ENSDARG00000021124 78399 1.667 0.802 - - - - - - 0.865 - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
31. tle2 5014 1.662 - - - 0.793 - 0.869 - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
32. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.652 - - - 0.814 - 0.838 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
33. notch3 ENSDARG00000052139 15033 1.648 - - 0.844 - - 0.804 - - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
34. TUBA1A ENSDARG00000001889 25294 1.647 - - - 0.845 - 0.802 - - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
35. tuba1b ENSDARG00000045367 8485 1.64 - - - 0.815 - - - - 0.825 tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
36. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.636 0.753 - - - - 0.883 - - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
37. h2afvb ENSDARG00000116491 35692 1.635 - - - - - 0.762 - 0.873 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
38. mllt10 ENSDARG00000045401 7557 1.631 - - 0.773 - - 0.858 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
39. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.631 - - - - - 0.845 0.786 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
40. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 1.631 0.813 - - - - 0.818 - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
41. smarce1 ENSDARG00000016871 9628 1.621 - - - - - 0.792 - - 0.829 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
42. cd99l2 ENSDARG00000056722 5036 1.621 - - - 0.766 - 0.855 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
43. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.593 - - - 0.741 - 0.852 - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
44. myt1b ENSDARG00000102879 5411 1.591 - - - 0.789 - 0.802 - - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
45. si:ch211-202e12.3 401 1.584 - - - 0.779 - 0.805 - - - si:ch211-202e12.3, transcript variant X6
46. smarca5 ENSDARG00000052348 15433 1.582 0.709 - 0.873 - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
47. khsrp ENSDARG00000026489 15738 1.58 - 0.708 - - - 0.872 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
48. bcl11ab ENSDARG00000063153 3032 1.576 - - - 0.703 - 0.873 - - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
49. anp32a ENSDARG00000006487 28249 1.574 - - 0.765 - - 0.809 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
50. GANAB_2 GANAB_2 3210 1.557 - - - - - 0.822 - 0.735 -
51. hes6 ENSDARG00000019335 4754 1.553 - - - 0.765 - 0.788 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
52. relnl relnl 863 1.552 - - - 0.781 - 0.771 - - -
53. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.551 - - - 0.777 - - - 0.774 - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
54. ubc ENSDARG00000102632 36050 1.547 - - - 0.777 - 0.770 - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
55. vps35 ENSDARG00000008224 13245 1.546 - - - 0.726 - 0.820 - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
56. nucks1a ENSDARG00000078473 28285 1.546 - - - - - 0.720 - 0.826 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
57. snrpb ENSDARG00000011125 11729 1.539 0.733 - - - - - - - 0.806 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
58. pak2b ENSDARG00000018476 4331 1.535 - - 0.759 - - 0.776 - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
59. rcor2 ENSDARG00000008278 1678 1.53 - - - - - 0.829 - 0.701 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
60. fbxl16 ENSDARG00000060915 259 1.524 - - - 0.728 - 0.796 - - - F-box and leucine-rich repeat protein 16 [Source:ZFIN;Acc:ZDB-GENE-120215-180]
61. setdb1b ENSDARG00000099021 2937 1.524 - - - 0.754 - 0.770 - - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
62. tuba1c ENSDARG00000055216 8384 1.518 - - - - - 0.799 - 0.719 - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
63. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.517 - - - 0.739 - 0.778 - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
64. mllt11 ENSDARG00000071026 2518 1.516 - - - - - 0.809 - 0.707 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
65. blcap ENSDARG00000052073 8646 1.514 - - - - - 0.742 - - 0.772 bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
66. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 1.505 - 0.752 - - - - 0.753 - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
67. si:ch1073-429i10.3 75111 1.504 - - - 0.705 - - - 0.799 - si:ch1073-429i10.3, transcript variant X2
68. adnp2b ENSDARG00000028431 4683 1.494 - - - 0.703 - 0.791 - - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
69. sncb ENSDARG00000104945 8197 1.493 - - - - - 0.763 - 0.730 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
70. IM:7163548 IM:7163548 6540 1.491 - - - 0.705 - 0.786 - - -
71. slbp ENSDARG00000100558 3405 1.491 - - - 0.729 - - - 0.762 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
72. marcksb ENSDARG00000008803 42949 1.49 - - - - - 0.788 - 0.702 - myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
73. Sep-02 Sep-02 10074 1.487 - - - - - 0.726 - - 0.761
74. rnd1 rnd1 1086 1.486 - - - - - 0.716 - - 0.770
75. wu:fq41a10 wu:fq41a10 7009 1.482 - - 0.700 0.782 - - - - -
76. top1l ENSDARG00000070545 40529 1.482 - - - 0.775 - - - 0.707 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
77. NCBP1 585 1.481 - - - - - 0.767 - 0.714 - nuclear cap binding protein subunit 1
78. puf60b ENSDARG00000001241 13827 1.473 - - - 0.755 - 0.718 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
79. tuba8l3 ENSDARG00000070155 7525 1.472 - 0.702 - - - 0.770 - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
80. rpl15 ENSDARG00000009285 81944 1.469 - 0.729 - - - - 0.740 - - ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
81. aurkb ENSDARG00000037640 4874 1.468 - 0.700 - - - 0.768 - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
82. eif4a3 ENSDARG00000102978 16162 1.459 - - - 0.743 - 0.716 - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
83. tgif1 ENSDARG00000059337 4020 1.459 - - - 0.750 - 0.709 - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
84. FAM53C FAM53C 769 1.444 - - - - - 0.741 - 0.703 -
85. mad2l1 ENSDARG00000004713 3398 1.435 - - - 0.702 - 0.733 - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
86. tubb5 ENSDARG00000037997 18691 1.435 - 0.706 - 0.729 - - - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
87. sae1 ENSDARG00000010487 2028 1.434 - - - - - 0.705 - 0.729 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
88. myef2 ENSDARG00000059398 6050 1.431 - - - 0.720 - 0.711 - - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
89. nova2 ENSDARG00000017673 7685 1.426 - - - 0.716 - 0.710 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
90. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.42 - - - - - 0.706 - 0.714 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
91. edf1 ENSDARG00000009950 10518 0.993 - - - - - - 0.993 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
92. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 0.991 - - - - - - 0.991 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
93. lsm12b ENSDARG00000109510 14459 0.991 - - - - - - 0.991 - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
94. ctnnb1 ENSDARG00000014571 12004 0.989 - - - - - - 0.989 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
95. meis1 meis1 6937 0.988 - - - - - - 0.988 - -
96. sub1a ENSDARG00000053446 13383 0.988 - - - - - - 0.988 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
97. snrnp27 ENSDARG00000035625 9080 0.988 - - - - - - 0.988 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
98. TNRC6C_1 TNRC6C_1 6574 0.987 - - - - - - 0.987 - -
99. zranb2 ENSDARG00000044332 6723 0.987 - - - - - - 0.987 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
100. sept9a ENSDARG00000020235 6881 0.987 - - - - - - 0.987 - - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]

There are 1305 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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