Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for h2afx

Gene Name Gene ID Reads Annotation
h2afx ENSDARG00000029406 2116 H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]










Genes with expression patterns similar to h2afx

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. h2afx ENSDARG00000029406 2116 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
2. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 2.439 - - - - 0.938 0.724 - 0.777 - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
3. chaf1b ENSDARG00000056473 880 2.262 - - - - - - 0.718 0.829 0.715 chromatin assembly factor 1, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1947]
4. fen1 ENSDARG00000011404 3358 1.737 - - - - 0.914 - 0.823 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
5. lin54 ENSDARG00000063194 2583 1.734 - - - - 0.958 - - 0.776 - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
6. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.729 - - - - 0.945 - 0.784 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
7. hey2 ENSDARG00000013441 540 1.726 - - - - 0.929 - - 0.797 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
8. atp6v0cb ENSDARG00000036577 3472 1.708 - 0.801 - - 0.907 - - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
9. znf865 ENSDARG00000036698 15532 1.707 - - - - 0.882 - 0.825 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
10. sin3b ENSDARG00000062472 2025 1.699 - - - - 0.936 - 0.763 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
11. dhfr ENSDARG00000004251 1824 1.699 - - - - 0.944 - 0.755 - - dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
12. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.689 - - - - 0.939 - 0.750 - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
13. nuf2 ENSDARG00000034624 2252 1.68 - - - - 0.947 - 0.733 - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
14. tbl1x ENSDARG00000060438 1386 1.677 - - - - 0.934 0.743 - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
15. smn1 ENSDARG00000018494 1024 1.673 - - - 0.719 0.954 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
16. scube2 ENSDARG00000037362 2833 1.669 - - - - 0.930 - - 0.739 - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
17. FBXO33 ENSDARG00000075400 1164 1.664 - - - - 0.927 - - 0.737 - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
18. casc5 1487 1.662 - - - - 0.931 - 0.731 - - cancer susceptibility candidate 5, transcript variant X3
19. srpk1b ENSDARG00000031560 2079 1.657 - - - - 0.946 - - 0.711 - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
20. kdm1a ENSDARG00000060679 6152 1.639 - - - - 0.867 - 0.772 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
21. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.631 - - - - - - 0.852 - 0.779 nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
22. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.628 - - - - 0.926 0.702 - - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
23. brd3b ENSDARG00000100129 6387 1.623 - - - - 0.878 - 0.745 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
24. lsm14ab ENSDARG00000100553 3837 1.62 - - - - 0.918 0.702 - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
25. hsp90aa1.2 ENSDARG00000024746 5210 1.608 - - - - - - 0.846 - 0.762 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
26. si:dkey-57k17.1 ENSDARG00000104697 442 1.598 - - - - - - 0.796 0.802 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
27. runx1t1 ENSDARG00000003680 633 1.598 - - - - - 0.830 - 0.768 - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
28. vldlr ENSDARG00000006257 772 1.592 - - - - - 0.807 0.785 - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
29. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.588 - - - - 0.841 - - - 0.747 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
30. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.582 - - - - - - 0.787 - 0.795 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
31. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 1.579 - 0.749 - - - - - 0.830 - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
32. ndc1 ENSDARG00000021120 2417 1.578 - - - - - 0.725 - 0.853 - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
33. snrpd3l ENSDARG00000076283 7655 1.571 - - - - 0.797 - 0.774 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
34. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 1.563 - 0.806 - - - - 0.757 - - nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
35. snrpa ENSDARG00000018890 4593 1.558 0.721 0.837 - - - - - - - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
36. zgc:55733 ENSDARG00000103845 1550 1.558 - 0.838 - - - - 0.720 - - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
37. htt ENSDARG00000052866 844 1.555 - 0.836 - - - 0.719 - - - huntingtin [Source:ZFIN;Acc:ZDB-GENE-990415-131]
38. zgc:112980 ENSDARG00000037739, ENSDARG00000114118 552 1.554 - - - - - - 0.786 0.768 - zgc:112980 [Source:ZFIN;Acc:ZDB-GENE-050306-1]
39. dync1li2 ENSDARG00000035924, ENSDARG00000110202 1429 1.541 - - - - - - - 0.819 0.722 dynein, cytoplasmic 1, light intermediate chain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-156]
40. ylpm1 ENSDARG00000043680 7676 1.54 - - - - 0.743 - 0.797 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
41. lig3 ENSDARG00000052553 2665 1.54 - 0.804 - - - - 0.736 - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
42. wu:fb30e12 wu:fb30e12 1254 1.54 - - - 0.746 - - 0.794 - -
43. REXO4 ENSDARG00000088619 655 1.532 - - - - - - 0.727 0.805 - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
44. trabd ENSDARG00000010445 195 1.519 - - - - - - 0.747 0.772 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
45. proza ENSDARG00000037783, ENSDARG00000116864 500 1.513 - - 0.707 - - - - 0.806 - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
46. CDCA2 CDCA2 930 1.51 - - - - - 0.781 - - 0.729
47. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.507 - - - - - 0.751 0.756 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
48. tgif1 ENSDARG00000059337 4020 1.503 - - - - - - 0.789 - 0.714 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
49. mybl2 mybl2 1341 1.502 - - - - - - 0.737 0.765 -
50. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.485 - - - - - - 0.715 0.770 - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
51. ppp1r15a ENSDARG00000069135 871 1.482 - - - - - - 0.727 0.755 - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
52. hira ENSDARG00000013434 2204 1.481 - - - - - 0.744 - - 0.737 histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
53. prpf38a ENSDARG00000039213, ENSDARG00000116046 1537 1.476 - - - - - 0.764 0.712 - - pre-mRNA processing factor 38A [Source:ZFIN;Acc:ZDB-GENE-040801-225]
54. top2b ENSDARG00000034195 3715 1.475 - 0.736 - - - - 0.739 - - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
55. atl1 ENSDARG00000060481 251 1.474 - - - - - - 0.706 0.768 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
56. FRG1 ENSDARG00000056504 1196 1.463 - 0.710 - 0.753 - - - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
57. ptplb ptplb 6135 1.462 - 0.761 - - - - - 0.701 -
58. dopey2 1088 1.453 - 0.751 - - - - - 0.702 - dopey family member 2, transcript variant X2
59. mark2b ENSDARG00000032458 821 1.452 - - - - - - 0.746 0.706 - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
60. ssbp4 ENSDARG00000056483 10196 1.446 - - - - - 0.728 0.718 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
61. cenpw ENSDARG00000092136 1684 1.44 - - - 0.710 - - - - 0.730 centromere protein W [Source:ZFIN;Acc:ZDB-GENE-100922-200]
62. aspm ENSDARG00000103754 5708 1.435 - 0.713 - - - - 0.722 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
63. rybpa ENSDARG00000037773 904 1.433 - - - 0.718 - - 0.715 - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
64. AL844567.1 AL844567.1 1605 1.431 - - - - - 0.729 - - 0.702
65. apbb1 ENSDARG00000076560 1748 1.427 - - - - - 0.706 0.721 - - amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]
66. nop58 ENSDARG00000104353 8497 1.425 - - - - - - 0.702 - 0.723 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
67. eif4h ENSDARG00000042252 6742 1.419 - - - 0.701 - - 0.718 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
68. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 0.967 - - - - 0.967 - - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
69. nol9 ENSDARG00000077751 2471 0.966 - - - - 0.966 - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
70. gins2 ENSDARG00000002304 1187 0.965 - - - - 0.965 - - - - GINS complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050419-19]
71. rfc1 ENSDARG00000054799 1416 0.957 - - - - 0.957 - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
72. gatad2ab ENSDARG00000006192 2461 0.957 - - - - 0.957 - - - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
73. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 0.954 - - - - 0.954 - - - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
74. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 0.954 - - - - 0.954 - - - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
75. med14 ENSDARG00000009953 1383 0.954 - - - - 0.954 - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
76. rab10 ENSDARG00000046106 15618 0.953 - - - - 0.953 - - - - RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
77. smo ENSDARG00000002952 6411 0.953 - - - - 0.953 - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
78. SENP1 SENP1 1122 0.953 - - - - 0.953 - - - -
79. C9H2orf47 C9H2orf47 2036 0.952 - - - - 0.952 - - - -
80. UBE2QL1 ENSDARG00000079276 3474 0.951 - - - - 0.951 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
81. TUBB8P7_1 TUBB8P7_1 2722 0.949 - - - - 0.949 - - - -
82. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.948 - - - - 0.948 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
83. naa15a ENSDARG00000003213 5889 0.948 - - - - 0.948 - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
84. zgc:123105 ENSDARG00000003127 3061 0.946 - - - - 0.946 - - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
85. toporsb ENSDARG00000105028 1898 0.945 - - - - 0.945 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
86. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 0.945 - - - - 0.945 - - - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
87. lgi1a ENSDARG00000020493 1218 0.945 - - - - 0.945 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
88. psmb6 ENSDARG00000002240 8015 0.945 - - - - 0.945 - - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
89. cenpe ENSDARG00000063385 4428 0.945 - - - - 0.945 - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
90. txlna ENSDARG00000077037 2614 0.945 - - - - 0.945 - - - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
91. st8sia6 ENSDARG00000021195 2244 0.944 - - - - 0.944 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
92. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 0.944 - - - - 0.944 - - - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
93. atl3 ENSDARG00000004270 2806 0.944 - - - - 0.944 - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
94. si:dkeyp-120h9.1 ENSDARG00000020278 3120 0.943 - - - - 0.943 - - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
95. pip5k1bb ENSDARG00000006508 2812 0.943 - - - - 0.943 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
96. psmc5 ENSDARG00000015315 8458 0.943 - - - - 0.943 - - - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
97. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 0.942 - - - - 0.942 - - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
98. odz4 odz4 822 0.942 - - - - 0.942 - - - -
99. usp36 ENSDARG00000032327 1884 0.942 - - - - 0.942 - - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
100. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 0.941 - - - - 0.941 - - - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]

There are 1116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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