Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for h2afvb

Gene Name Gene ID Reads Annotation
h2afvb ENSDARG00000116491 35692 H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]










Genes with expression patterns similar to h2afvb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. h2afvb ENSDARG00000116491 35692 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
2. snrpe ENSDARG00000033175 7462 3.162 0.799 0.737 - - - 0.832 - 0.794 - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
3. seta ENSDARG00000031495 39977 3.127 0.702 - - 0.878 - 0.834 0.713 - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
4. lfng ENSDARG00000037879 11783 3.101 0.765 0.846 - - 0.774 0.716 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
5. ctnnb1 ENSDARG00000014571 12004 2.494 - 0.889 - - - 0.818 - 0.787 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
6. rbm4.3 ENSDARG00000022129 28571 2.484 0.740 - - - - 0.864 - 0.880 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
7. snrpf ENSDARG00000105037 10241 2.434 0.839 0.714 - - - 0.881 - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
8. zgc:112425 zgc:112425 293873 2.422 - - - 0.758 - 0.759 - 0.905 -
9. h3f3a 66671 2.404 0.761 - - 0.712 - - - 0.931 - H3 histone, family 3A, transcript variant X1
10. vdac1 ENSDARG00000045132 8051 2.396 0.889 - - 0.707 - 0.800 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
11. nucks1a ENSDARG00000078473 28285 2.396 - 0.725 - - - 0.858 - 0.813 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
12. khsrp ENSDARG00000026489 15738 2.378 0.766 - - - 0.720 0.892 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
13. prpf8 ENSDARG00000026180 7026 2.364 0.813 0.846 - - - 0.705 - - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
14. pcbp2 ENSDARG00000099039 4248 2.358 - 0.845 - - - 0.792 - 0.721 - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
15. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.339 0.711 0.891 - - - 0.737 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
16. srsf4 ENSDARG00000105293 9657 2.322 0.749 0.856 - - - 0.717 - - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
17. pbx4 ENSDARG00000052150 35676 2.31 0.849 0.746 - - - - - 0.715 - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
18. hmgb3a ENSDARG00000056725 15668 2.307 0.824 0.776 - - - 0.707 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
19. ssbp4 ENSDARG00000056483 10196 2.303 0.706 - - - - 0.738 - 0.859 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
20. ptmab ENSDARG00000101766 182812 2.302 0.702 - 0.719 - - - - 0.881 - prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
21. foxp4 ENSDARG00000076120 9458 2.299 0.762 0.818 - - - - - - 0.719 forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
22. sumo3a ENSDARG00000028119 13447 2.263 0.729 - - - - 0.821 - 0.713 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
23. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 2.26 0.737 0.814 - - - 0.709 - - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
24. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 2.25 0.721 0.742 - - - - - 0.787 - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
25. prmt1 ENSDARG00000010246 11311 2.23 0.787 0.704 - 0.739 - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
26. marcksb ENSDARG00000008803 42949 2.214 - - - 0.765 0.720 0.729 - - - myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
27. lmnb1 ENSDARG00000044299 9817 2.211 - - - - - 0.787 - 0.711 0.713 lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
28. anp32a ENSDARG00000006487 28249 2.202 0.757 - - 0.730 - 0.715 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
29. cx43.4 ENSDARG00000007099 16369 2.202 0.717 0.781 - - - 0.704 - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
30. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.148 0.706 0.721 - - - 0.721 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
31. tmem35 ENSDARG00000052567 5685 2.146 0.718 - 0.700 - - - - 0.728 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
32. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.72 - 0.825 - - - - 0.895 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
33. ube2e1 ENSDARG00000116649 10656 1.72 - 0.881 - - - 0.839 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
34. hdac1 ENSDARG00000015427 19804 1.7 0.787 - - - - 0.913 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
35. anp32b ENSDARG00000023330 25013 1.685 - - - - - 0.820 - - 0.865 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
36. znf865 ENSDARG00000036698 15532 1.685 - 0.863 - - - 0.822 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
37. ammecr1 ENSDARG00000012892 14475 1.678 - - 0.828 - - 0.850 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
38. foxp1a ENSDARG00000004843 3961 1.676 - 0.780 - - - - 0.896 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
39. si:ch211-51e12.7 ENSDARG00000045914 9598 1.671 0.791 - - - - 0.880 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
40. akirin2 ENSDARG00000058729 13245 1.671 - - - - - 0.850 - 0.821 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
41. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.667 - - - - - - 0.893 0.774 - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
42. syncrip ENSDARG00000040184 24690 1.662 - - 0.774 - - - 0.888 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
43. blcap ENSDARG00000052073 8646 1.661 - - 0.820 - - 0.841 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
44. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.638 - 0.800 - - - 0.838 - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
45. stmn1a ENSDARG00000004169 21169 1.638 0.797 0.841 - - - - - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
46. psma5 ENSDARG00000003526, ENSDARG00000116794 5106 1.637 0.818 - - - - 0.819 - - - proteasome subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]
47. h3f3d ENSDARG00000045248 43757 1.635 - - - - - 0.762 - 0.873 - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
48. ctnna1 ENSDARG00000102441 7984 1.635 - 0.834 - - - 0.801 - - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
49. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.612 - - - - - 0.802 - 0.810 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
50. clasp2 ENSDARG00000020345 3382 1.61 - - - - - 0.714 0.896 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
51. hoxa9b ENSDARG00000056819 3081 1.608 0.806 - - - - 0.802 - - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
52. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.608 - 0.857 - - - 0.751 - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
53. ilf2 ENSDARG00000014591 14543 1.607 0.798 - - - - - - 0.809 - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
54. hp1bp3 ENSDARG00000044669 23708 1.607 - - - - - 0.825 - - 0.782 heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
55. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1.607 - 0.712 - - - - 0.895 - -
56. TNRC6C_1 TNRC6C_1 6574 1.606 - 0.805 - - - 0.801 - - -
57. smarce1 ENSDARG00000016871 9628 1.605 - - - - - 0.844 - 0.761 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
58. si:ch211-196l7.4 ENSDARG00000095451 3766 1.604 - 0.829 - - - 0.775 - - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
59. zgc:123194 zgc:123194 69174 1.603 0.762 - - - - - - 0.841 -
60. cand1 ENSDARG00000017841 8164 1.6 - 0.762 - - - 0.838 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
61. hnrnpab hnrnpab 72354 1.595 - - - - - 0.857 - 0.738 -
62. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.593 - - - - - 0.805 - 0.788 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
63. PRTG PRTG 4714 1.593 0.890 - - - - 0.703 - - -
64. mapre1b ENSDARG00000002659 9119 1.592 - - - - - 0.792 - 0.800 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
65. ccnt2b ENSDARG00000036510 3353 1.591 - 0.815 - - - 0.776 - - - cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
66. puf60b ENSDARG00000001241 13827 1.588 - 0.744 - - - 0.844 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
67. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.588 0.813 - - - - - - 0.775 -
68. elof1 ENSDARG00000099453 6176 1.583 0.843 - - - - 0.740 - - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
69. smarcb1b ENSDARG00000011594 2413 1.583 - 0.826 - - - - - 0.757 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
70. MAP4K4 ENSDARG00000098670 4665 1.577 0.701 - - - - 0.876 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
71. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.576 - 0.747 - - - 0.829 - - - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
72. ANKRD11 ENSDARG00000051886 10024 1.576 - 0.759 - - - 0.817 - - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
73. TAF15 ENSDARG00000070019 5102 1.571 - - - - - 0.781 - 0.790 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
74. smc1al ENSDARG00000058203 8838 1.571 0.754 - - - - 0.817 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
75. chd4b ENSDARG00000025789 14299 1.569 0.706 0.863 - - - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
76. ube2nb ENSDARG00000045877 4583 1.562 - 0.812 - - - 0.750 - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
77. snrpd1 ENSDARG00000011648 8615 1.561 - 0.744 - - - - - 0.817 - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
78. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.56 - 0.800 - - - 0.760 - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
79. rrm1 ENSDARG00000014017 7296 1.559 0.724 0.835 - - - - - - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
80. alyref ENSDARG00000077732 25934 1.556 0.796 - - - - 0.760 - - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
81. cnn3b ENSDARG00000029856 4807 1.556 - - - - - 0.795 - 0.761 - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
82. tfdp2 ENSDARG00000042835 1985 1.556 - 0.782 - - - 0.774 - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
83. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.553 - 0.793 - - - 0.760 - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
84. supt16h ENSDARG00000079949 4755 1.552 - 0.833 0.719 - - - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
85. snrpc ENSDARG00000009871 9567 1.552 0.787 - - - - - - 0.765 - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
86. marcksa ENSDARG00000004049 2518 1.552 - - - - - 0.736 - 0.816 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
87. epha4b ENSDARG00000011600 3110 1.549 0.795 0.754 - - - - - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
88. khdrbs1a ENSDARG00000052856 53666 1.549 0.821 - - - - - - 0.728 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
89. si:ch1073-429i10.3 75111 1.548 - - - - - - - 0.779 0.769 si:ch1073-429i10.3, transcript variant X2
90. mbd3a ENSDARG00000061774 4047 1.547 - 0.792 - - - 0.755 - - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
91. kmt2a ENSDARG00000004537 2169 1.546 - 0.770 - - - 0.776 - - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
92. SERBP1 SERBP1 9276 1.546 - 0.711 - - - 0.835 - - -
93. pak2b ENSDARG00000018476 4331 1.545 - 0.803 - - - 0.742 - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
94. CREBZF ENSDARG00000089787 4261 1.544 - 0.811 - - - 0.733 - - - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
95. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.543 0.772 - - - - - - 0.771 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
96. caprin1b ENSDARG00000054272 7033 1.543 - - - - - 0.823 - 0.720 - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
97. mllt10 ENSDARG00000045401 7557 1.542 - - - - - 0.822 - - 0.720 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
98. kif15 ENSDARG00000012073 1936 1.541 - 0.796 - - - 0.745 - - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
99. pcna ENSDARG00000054155 89521 1.541 - - - - - 0.751 - 0.790 - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
100. BX511086.1 BX511086.1 8308 1.541 - 0.752 - - - 0.789 - - -

There are 1281 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA