Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for h2afva

Gene Name Gene ID Reads Annotation
h2afva ENSDARG00000068820 16427 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]










Genes with expression patterns similar to h2afva

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. h2afva ENSDARG00000068820 16427 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
2. MKI67 ENSDARG00000091150 11038 4.163 - - 0.906 0.822 - 0.810 0.833 - 0.792 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
3. hnrpl 6412 3.305 - - - - 0.925 0.839 0.805 - 0.736 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
4. srsf4 ENSDARG00000105293 9657 3.302 - - 0.812 0.815 - 0.851 0.824 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
5. HNRNPAB HNRNPAB 22267 3.281 - - 0.875 - - - 0.944 0.702 0.760
6. kifc1 ENSDARG00000001558 6658 3.27 - - 0.780 - 0.862 0.823 0.805 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
7. sumo3a ENSDARG00000028119 13447 3.223 - - - 0.845 - - 0.855 0.804 0.719 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
8. ssbp4 ENSDARG00000056483 10196 3.214 - - - 0.761 - 0.917 0.829 0.707 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
9. chd7 ENSDARG00000075211 12085 3.143 - 0.738 - 0.742 - 0.875 0.788 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
10. ccne2 ENSDARG00000098529 4695 3.139 - - - 0.749 0.859 0.705 0.826 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
11. carm1 ENSDARG00000018698 5599 3.09 - - - 0.720 - 0.770 0.853 - 0.747 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
12. srrm1 ENSDARG00000001244 4972 3.053 - - - 0.710 0.762 0.778 0.803 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
13. mta2 ENSDARG00000013031 2932 3.028 - - - 0.736 - - 0.810 0.716 0.766 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
14. rrm1 ENSDARG00000014017 7296 3.018 - - - 0.731 - - 0.805 0.717 0.765 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
15. nova2 ENSDARG00000017673 7685 2.98 - - 0.749 0.705 - 0.757 - - 0.769 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
16. anp32b ENSDARG00000023330 25013 2.555 0.973 - - - - 0.734 0.848 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
17. SNRPG ENSDARG00000099667 18697 2.542 0.929 - - 0.742 - - 0.871 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
18. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.537 - - 0.844 0.786 - - 0.907 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
19. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.533 - - - - 0.898 0.795 0.840 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
20. supt6h ENSDARG00000006524 3221 2.528 0.950 - - - - 0.715 0.863 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
21. nckap5l ENSDARG00000079148 4227 2.509 0.958 - - - - - 0.808 - 0.743 NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
22. FP016176.1 FP016176.1 7030 2.466 - - - - 0.846 0.830 0.790 - -
23. tmeff1b ENSDARG00000056740 11253 2.464 0.962 - - - 0.757 - 0.745 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
24. ppm1g ENSDARG00000075559 6516 2.463 - - - 0.791 0.932 0.740 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
25. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.459 - - - - 0.848 0.851 0.760 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
26. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.432 - - - - 0.957 0.766 - - 0.709 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
27. ANKRD11 ENSDARG00000051886 10024 2.404 - - - - - 0.832 0.758 - 0.814 ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
28. smarca5 ENSDARG00000052348 15433 2.403 - - - - - 0.831 0.830 - 0.742 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
29. pl10 pl10 10795 2.401 - - 0.778 - - 0.753 0.870 - -
30. akirin2 ENSDARG00000058729 13245 2.396 - - 0.823 - - - 0.853 - 0.720 akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
31. plcg1 ENSDARG00000038442 5324 2.388 - - - - 0.939 - 0.739 - 0.710 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
32. tmem35 ENSDARG00000052567 5685 2.385 - - - 0.857 - 0.812 0.716 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
33. rbb4 rbb4 15541 2.384 - - - - - 0.776 0.883 - 0.725
34. txnrd1 11401 2.375 - - - 0.840 0.812 - 0.723 - - thioredoxin reductase 1
35. hmgb3a ENSDARG00000056725 15668 2.371 - - - - - 0.758 0.902 - 0.711 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
36. eif3f ENSDARG00000077533 24387 2.359 0.758 0.879 - - - - 0.722 - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
37. meaf6 ENSDARG00000101216 6865 2.358 - - - 0.730 - - 0.861 0.767 - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
38. pou2f1b ENSDARG00000007996 2172 2.357 - - - - 0.848 0.794 0.715 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
39. smarce1 ENSDARG00000016871 9628 2.357 - - 0.782 - - 0.727 0.848 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
40. api5 ENSDARG00000033597 6655 2.356 - - - 0.770 0.833 0.753 - - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
41. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.353 - - 0.790 - 0.802 - 0.761 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
42. h2afy2_1 ENSDARG00000087897 9887 2.342 - 0.743 - - 0.755 - 0.844 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
43. cdk6 ENSDARG00000070228 1778 2.337 - - - 0.734 0.852 - 0.751 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
44. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.332 - - - - - 0.727 0.869 0.736 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
45. ywhaqb ENSDARG00000023323 28138 2.329 0.878 - - 0.717 - - - - 0.734 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
46. arnt2 ENSDARG00000103697 5731 2.328 - - - - - 0.803 0.813 - 0.712 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
47. sumo3b ENSDARG00000035993 3414 2.327 - - - 0.769 - 0.746 0.812 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
48. vdac1 ENSDARG00000045132 8051 2.323 - - 0.774 - - 0.818 0.731 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
49. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 2.306 - - - 0.754 - 0.742 0.810 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
50. ss18 ENSDARG00000002970 2618 2.3 - - - 0.748 - 0.843 0.709 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
51. ylpm1 ENSDARG00000043680 7676 2.297 - - - 0.712 - 0.759 0.826 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
52. syncripl ENSDARG00000026723 3889 2.296 - - - - - 0.737 0.811 - 0.748 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
53. rnps1 ENSDARG00000116743 9994 2.295 - - - - - 0.779 0.715 - 0.801 RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
54. snrpc ENSDARG00000009871 9567 2.268 - - - 0.726 - - 0.824 0.718 - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
55. CR936437.1 CR936437.1 6465 2.263 - - - 0.794 - - 0.736 - 0.733
56. u2af2b ENSDARG00000011740 6946 2.262 - - - 0.734 - 0.727 0.801 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
57. ddx19 ENSDARG00000005699 4602 2.257 - - - 0.704 0.831 0.722 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
58. tuba1c ENSDARG00000055216 8384 2.248 - - 0.769 - - - - 0.746 0.733 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
59. plp1a ENSDARG00000103732 3544 2.246 - - - - 0.821 - 0.702 - 0.723 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
60. npm1b ENSDARG00000037675 5448 2.242 - - 0.752 0.731 - - 0.759 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
61. marcksa ENSDARG00000004049 2518 2.213 - - - - - 0.708 0.776 0.729 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
62. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.208 - - - - - - 0.759 0.732 0.717 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
63. cspg5a ENSDARG00000069981 1699 2.206 - - - - - 0.737 0.721 - 0.748 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
64. PPIL3 ENSDARG00000033370 714 2.201 0.778 - - - - 0.714 0.709 - - peptidylprolyl isomerase (cyclophilin)-like 3 [Source:ZFIN;Acc:ZDB-GENE-040625-159]
65. pcna ENSDARG00000054155 89521 2.188 - - - - - 0.768 - 0.716 0.704 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
66. CABZ01111990.1 CABZ01111990.1 4374 2.186 - - - - - 0.750 0.707 - 0.729
67. snrpd1 ENSDARG00000011648 8615 2.182 - - - 0.713 - 0.754 - 0.715 - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
68. wu:fc51f04 wu:fc51f04 7074 2.179 - - - 0.723 - - - 0.746 0.710
69. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 2.176 - 0.711 - - 0.711 - - 0.754 - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
70. wu:fq41a10 wu:fq41a10 7009 2.176 - - - 0.709 - - 0.753 0.714 -
71. ilf2 ENSDARG00000014591 14543 2.157 - - - - 0.703 - - 0.737 0.717 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
72. dpysl3 ENSDARG00000002587 4381 2.138 - - - - - 0.730 0.701 - 0.707 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
73. cox6c ENSDARG00000038577 16845 1.839 0.931 - - - 0.908 - - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
74. brd3b ENSDARG00000100129 6387 1.825 0.961 - - - - - 0.864 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
75. ppm1la ENSDARG00000063218 2142 1.795 0.946 - - - 0.849 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
76. rad50 ENSDARG00000038917 1105 1.786 0.940 - - - 0.846 - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
77. ptenb ENSDARG00000056623 5783 1.762 - - - - 0.941 - 0.821 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
78. fkbp3 ENSDARG00000098059 5428 1.761 0.941 - - - - - 0.820 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
79. whsc1l1 8544 1.755 - - - - - 0.886 0.869 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
80. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.747 0.965 - - 0.782 - - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
81. nr2f6b ENSDARG00000003165 5855 1.742 - - - - 0.934 - 0.808 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
82. clstn1 ENSDARG00000031720 5286 1.739 - - - - 0.941 0.798 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
83. si:ch73-46j18.5 ENSDARG00000092467 6002 1.737 - - - - 0.935 - 0.802 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
84. Sep-02 Sep-02 10074 1.727 0.927 - - - - - 0.800 - -
85. ube2i ube2i 13024 1.725 - - - 0.807 - - 0.918 - -
86. h3f3a 66671 1.72 - - - - - - 0.934 0.786 - H3 histone, family 3A, transcript variant X1
87. marcksb ENSDARG00000008803 42949 1.719 0.940 - - - - 0.779 - - - myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
88. mycla ENSDARG00000006003 1866 1.716 0.942 - - - - - 0.774 - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
89. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.716 - - - - - 0.853 0.863 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
90. sin3b ENSDARG00000062472 2025 1.711 - - - - - 0.856 0.855 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
91. ubc ENSDARG00000102632 36050 1.707 0.924 - - - - - - - 0.783 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
92. uba1 ENSDARG00000037559 11579 1.702 - - - - - 0.824 0.878 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
93. rab14 ENSDARG00000074246 4084 1.701 0.947 - - - - - 0.754 - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
94. metap2b_1 ENSDARG00000102571 5507 1.693 0.744 - - - 0.949 - - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
95. srsf6a ENSDARG00000013729 8576 1.691 0.932 - - - - - 0.759 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
96. myef2 ENSDARG00000059398 6050 1.69 0.939 - - - - - 0.751 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
97. nxf1 ENSDARG00000055076 3251 1.686 0.945 - - - - - 0.741 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
98. hmgb2b ENSDARG00000053990 11519 1.679 - - - - - - 0.924 0.755 - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
99. st13 ENSDARG00000021973 7787 1.679 0.941 - - - - - 0.738 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
100. anapc10 ENSDARG00000090152 1406 1.678 - - - - 0.844 - 0.834 - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]

There are 1733 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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