Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gtf3ab

Gene Name Gene ID Reads Annotation
gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]










Genes with expression patterns similar to gtf3ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
2. guca1c ENSDARG00000030758 9 1.922 1.000 - - - - - 0.922 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
3. dusp12 ENSDARG00000076330 173 1.85 - - - 0.945 - 0.905 - - - dual specificity phosphatase 12 [Source:ZFIN;Acc:ZDB-GENE-050626-91]
4. zgc:172075 ENSDARG00000076146 93 1.846 - - - 0.990 - - 0.856 - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
5. FNIP2 FNIP2 593 1.832 - - - 0.972 - 0.860 - - -
6. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 1.823 - - - 0.979 - - 0.844 - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
7. si:ch211-219f7.3 si:ch211-219f7.3 48 1.814 0.895 - - - - - 0.919 - -
8. si:dkey-233h12.4 si:dkey-233h12.4 2 1.81 1.000 - - - - - - - 0.810
9. si:ch211-113p18.3 ENSDARG00000087835 377 1.798 - - - - - 0.946 0.852 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
10. ncbp2 ENSDARG00000014898 232 1.796 - - - 0.922 - - 0.874 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
11. tmem110 497 1.791 - - - - - 0.938 0.853 - - transmembrane protein 110
12. CABZ01044023.1 ENSDARG00000117734 240 1.784 - - - - - 0.896 0.888 - -
13. zgc:171779 ENSDARG00000016908 26 1.783 - - 0.807 - - 0.976 - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
14. bty bty 752 1.77 - - - - - 1.000 0.770 - -
15. GTF3A GTF3A 6 1.769 1.000 - - - - - - 0.769 -
16. hsd3b1 ENSDARG00000069926 35 1.763 1.000 - - - - - - 0.763 - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
17. itga4 ENSDARG00000103056 223 1.761 - - - 0.906 - 0.855 - - - integrin alpha 4 [Source:ZFIN;Acc:ZDB-GENE-110411-108]
18. CIT_1 CIT_1 6 1.751 1.000 - - - - - - - 0.751
19. si:ch211-200p22.4 ENSDARG00000029170, ENSDARG00000110266 175 1.737 - - - 0.960 - 0.777 - - - si:ch211-200p22.4 [Source:ZFIN;Acc:ZDB-GENE-081104-61]
20. CABZ01024770.1 CABZ01024770.1 150 1.723 - - - - - 0.894 0.829 - -
21. CU928217.1 CU928217.1 12 1.718 1.000 - - - - - - 0.718 -
22. esrrga ENSDARG00000004861 805 1.712 - - - 0.826 - - 0.886 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
23. mnat1 ENSDARG00000002077 287 1.711 0.830 - - - - - 0.881 - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
24. si:ch211-87m7.2 ENSDARG00000030129 223 1.705 - - - - - 0.858 0.847 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
25. mtfr2 ENSDARG00000060394 482 1.698 - - - 0.814 - - 0.884 - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
26. si:ch211-259i2.2 si:ch211-259i2.2 45 1.69 - - - - - 0.790 0.900 - -
27. 5S_rRNA_18 5S_rRNA_18 270 1.675 - - - 0.971 - - 0.704 - -
28. si:ch211-130m23.2 ENSDARG00000095136 121 1.67 - - - - - 0.817 0.853 - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
29. impad1 ENSDARG00000058114 667 1.659 - - - 0.767 - 0.892 - - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
30. U3 U3 287 1.65 - - - - - 0.742 0.908 - -
31. si:dkey-8k3.2 ENSDARG00000038424 285 1.65 - - - - - 0.949 0.701 - - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
32. efcab4a efcab4a 110 1.647 - - - - - 0.754 0.893 - -
33. agtr2 ENSDARG00000035552 286 1.639 0.874 - - 0.765 - - - - - angiotensin II receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050306-56]
34. fam5b fam5b 45 1.637 - - 0.735 - - - 0.902 - -
35. rbm5 ENSDARG00000098280 396 1.629 - - - 0.706 - - 0.923 - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
36. phyh ENSDARG00000086740 88 1.622 0.720 - - - - 0.902 - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
37. fam193b ENSDARG00000102831 442 1.621 0.702 - - - - - 0.919 - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
38. si:ch73-91k6.2 ENSDARG00000091598 727 1.618 - - - - - 0.721 0.897 - - si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
39. zgc:175214 ENSDARG00000022891 1013 1.617 - - - 0.848 - - 0.769 - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
40. ZNF337_16 ZNF337_16 22 1.613 0.865 - - - - - - - 0.748
41. AIFM2 ENSDARG00000077549 1419 1.61 - - - 0.749 - - 0.861 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
42. dhrs11a ENSDARG00000046090, ENSDARG00000112531 411 1.608 - - - 0.813 - 0.795 - - - dehydrogenase/reductase (SDR family) member 11a [Source:ZFIN;Acc:ZDB-GENE-060929-324]
43. tfec ENSDARG00000098745 1399 1.583 0.781 - - - - - 0.802 - - transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
44. ssh2b ENSDARG00000098955 614 1.575 - - - 0.782 - - 0.793 - - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
45. LGALS3BP LGALS3BP 51 1.569 - - - - - 0.711 0.858 - -
46. acy3.1 ENSDARG00000093003 54 1.561 - - 0.764 - - 0.797 - - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
47. chsy1 ENSDARG00000079027 455 1.557 - - - 0.704 - - 0.853 - - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
48. rfc5 ENSDARG00000035634 974 1.551 - - - - - 0.764 0.787 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
49. pdxkb ENSDARG00000036546 721 1.539 - - - - - 0.810 0.729 - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
50. COX19 ENSDARG00000063882 419 1.536 - - - 0.830 - - 0.706 - - cytochrome c oxidase assembly factor COX19 [Source:ZFIN;Acc:ZDB-GENE-070410-29]
51. CABZ01073405.1 CABZ01073405.1 275 1.53 - - - - - 0.724 0.806 - -
52. cryzl1 ENSDARG00000026902 401 1.53 - - - 0.784 - - 0.746 - - crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
53. TMEM116 TMEM116 96 1.515 - - 0.789 - - 0.726 - - -
54. zgc:91985 zgc:91985 1517 1.489 - - - 0.778 - - 0.711 - -
55. prkacab ENSDARG00000016809 1441 1.476 - - - - - 0.772 0.704 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
56. prkchb ENSDARG00000043243 126 1.463 - - - - - 0.750 0.713 - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
57. six4a ENSDARG00000004695 413 1.457 - - - 0.712 - - 0.745 - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
58. si:dkey-254e13.6 ENSDARG00000088301 191 1 1.000 - - - - - - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
59. ankdd1b ENSDARG00000025866 51 1 1.000 - - - - - - - - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
60. fbxw10 ENSDARG00000086484 11 1 1.000 - - - - - - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
61. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 1 1.000 - - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
62. f9a ENSDARG00000010097, ENSDARG00000113853 5 1 1.000 - - - - - - - - coagulation factor IXa [Source:ZFIN;Acc:ZDB-GENE-030714-2]
63. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 1.000 - - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
64. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1 1.000 - - - - - - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
65. FAM124B ENSDARG00000087489 16 1 1.000 - - - - - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
66. C6H22orf23 C6H22orf23 15 1 1.000 - - - - - - - -
67. nisch ENSDARG00000043077 11 1 1.000 - - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
68. lcp1 ENSDARG00000023188 298 1 1.000 - - - - - - - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
69. si:ch211-106h4.9 ENSDARG00000075706 36 1 1.000 - - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
70. TRIM35_12 TRIM35_12 2 1 1.000 - - - - - - - -
71. si:dkeyp-79c2.1 42 1 1.000 - - - - - - - - si:dkeyp-79c2.1, transcript variant X2
72. FBXL21 FBXL21 6 1 1.000 - - - - - - - -
73. shox ENSDARG00000025891 338 1 1.000 - - - - - - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
74. si:dkey-69c19.1 si:dkey-69c19.1 37 1 1.000 - - - - - - - -
75. CABZ01062083.1 CABZ01062083.1 40 1 1.000 - - - - - - - -
76. BX005294.4 BX005294.4 8 1 1.000 - - - - - - - -
77. si:dkey-27i16.2 ENSDARG00000098293 48 1 1.000 - - - - - - - - si:dkey-27i16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9667]
78. ENSDARG00000037617 ENSDARG00000037617 1 1 1.000 - - - - - - - -
79. RPS6KA2 ENSDARG00000028469 8 1 1.000 - - - - - - - - ribosomal protein S6 kinase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-090827-1]
80. alpi.2 ENSDARG00000053774 21 1 1.000 - - - - - - - - alkaline phosphatase, intestinal, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-142]
81. si:ch211-218o21.4 ENSDARG00000079869 4 1 1.000 - - - - - - - - si:ch211-218o21.4 [Source:ZFIN;Acc:ZDB-GENE-081104-178]
82. ift81 ENSDARG00000007444 97 1 1.000 - - - - - - - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]
83. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1 1.000 - - - - - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
84. hamp2 hamp2 67 1 1.000 - - - - - - - -
85. PKHD1L1 ENSDARG00000091116 39 1 1.000 - - - - - - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
86. cyp2p6 ENSDARG00000042978 46 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
87. ENSDARG00000089062 ENSDARG00000089062 7 1 1.000 - - - - - - - -
88. si:ch211-241e1.5 ENSDARG00000008906 70 1 1.000 - - - - - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
89. si:dkey-258f14.3 ENSDARG00000075974 9 1 1.000 - - - - - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
90. CR318653.1 ENSDARG00000104557 29 1 1.000 - - - - - - - -
91. xrra1 ENSDARG00000089578 18 1 1.000 - - - - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
92. CAMKV CAMKV 11 1 1.000 - - - - - - - -
93. CR388002.2 CR388002.2 3 1 1.000 - - - - - - - -
94. adrb3b ENSDARG00000052919 16 1 1.000 - - - - - - - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
95. CABZ01057633.1 CABZ01057633.1 39 1 1.000 - - - - - - - -
96. SH2D4A ENSDARG00000041378 6 1 1.000 - - - - - - - - SH2 domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-040426-932]
97. bcl11ba ENSDARG00000062510 169 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
98. slc5a9 ENSDARG00000005518 16 1 1.000 - - - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
99. ncaldb ENSDARG00000011334 123 1 1.000 - - - - - - - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
100. ccdc37 ccdc37 36 1 1.000 - - - - - - - -

There are 1545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA