Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gsx2

Gene Name Gene ID Reads Annotation
gsx2 ENSDARG00000043322, ENSDARG00000116417 329 GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]










Genes with expression patterns similar to gsx2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
2. sox2 ENSDARG00000070913 2763 2.92 - - 0.721 - 0.704 0.703 0.792 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
3. camk1da ENSDARG00000074905, ENSDARG00000111604 479 2.598 - - - - - 0.870 0.795 0.933 - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
4. ptf1a ENSDARG00000014479 349 2.572 1.000 - - - - 0.793 0.779 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
5. FGFBP3 FGFBP3 993 2.572 1.000 - 0.827 - 0.745 - - - -
6. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.429 - - 0.740 - - 0.890 0.799 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
7. AKT3 AKT3 1729 2.404 - - 0.757 - - 0.910 - 0.737 -
8. cldn19 ENSDARG00000044569 281 2.38 0.857 - - - - 0.820 0.703 - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
9. npas3b npas3b 1446 2.377 - - 0.830 - - 0.806 0.741 - -
10. hmp19 2554 2.346 - - - - - 0.868 0.724 - 0.754 HMP19 protein
11. relnl relnl 863 2.323 - - 0.727 - - 0.875 0.721 - -
12. msi1 ENSDARG00000010710 2634 2.27 - - 0.749 - - 0.760 - 0.761 - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
13. CYTH2 ENSDARG00000028800 2349 2.268 - - 0.714 - - 0.785 0.769 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
14. CNTNAP3 ENSDARG00000067824 25 2.246 0.713 - - - - 0.754 0.779 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
15. ptprna ENSDARG00000058646 1327 2.235 - - 0.758 - - 0.728 0.749 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
16. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 2.231 - - 0.712 - - 0.775 - 0.744 - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
17. phox2a ENSDARG00000007406 470 2.133 - - - 0.709 0.701 - - - 0.723 paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
18. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.944 1.000 - - - - 0.944 - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
19. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.896 0.911 - - - - 0.985 - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
20. si:ch211-132b12.7 ENSDARG00000068374 30 1.886 1.000 - - - - - - - 0.886 si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
21. calb1 ENSDARG00000031598 252 1.883 - - - - - 0.950 - 0.933 - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
22. si:ch1073-296i8.2 ENSDARG00000093773 36 1.871 1.000 - - - - - 0.871 - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
23. ROBO3_1 ROBO3_1 468 1.847 - - - - - 0.906 - 0.941 -
24. gdap1l1 ENSDARG00000028628 233 1.83 - - - - - - 0.871 0.959 - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
25. si:ch211-233h19.2 ENSDARG00000042213 47 1.819 0.871 - - - - - - 0.948 - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
26. BX470254.1_1 ENSDARG00000097402 50 1.786 1.000 - - - 0.786 - - - -
27. MCTP1 MCTP1 219 1.785 - - - - - 0.927 0.858 - -
28. rgs11 ENSDARG00000037646 24 1.784 1.000 - - - - 0.784 - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
29. ciz1a ENSDARG00000089781 20 1.779 1.000 - - - - - 0.779 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
30. sez6l ENSDARG00000100594 35 1.779 1.000 - - - - - 0.779 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
31. nmu ENSDARG00000043299 67 1.776 0.823 - - - - - - 0.953 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
32. atp2b3b ENSDARG00000023445 1424 1.764 - - - - - 0.959 0.805 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
33. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.764 - - - - - 0.985 0.779 - -
34. megf8_1 ENSDARG00000079751, ENSDARG00000103934 722 1.761 - - - - - - 0.790 0.971 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
35. pou4f1 ENSDARG00000005559 821 1.76 - - - - - 0.930 - 0.830 - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
36. gabrb2 ENSDARG00000079586 33 1.754 1.000 - - - - 0.754 - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
37. TTBK1_1 TTBK1_1 132 1.746 - - - - - 0.834 0.912 - -
38. adam23a ENSDARG00000062323 580 1.74 - - - - - 0.961 0.779 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
39. rgs20 ENSDARG00000038859 331 1.736 - - - - - 0.792 - 0.944 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
40. tagln3a ENSDARG00000079805 123 1.729 0.772 - - - - - 0.957 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
41. sult4a1 ENSDARG00000101967 205 1.726 1.000 - - - - - 0.726 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
42. her4.1 ENSDARG00000056732 1264 1.722 - - - - - 0.953 0.769 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
43. atp1b4 ENSDARG00000053262 1337 1.711 - - - - - 0.876 0.835 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
44. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.711 1.000 - - - 0.711 - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
45. vamp1 ENSDARG00000031283 3094 1.711 - - - - - 0.892 - 0.819 - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
46. GRM8_1 GRM8_1 85 1.707 1.000 - - - - 0.707 - - -
47. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.695 - - - - - 0.858 0.837 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
48. slc1a3a ENSDARG00000104431 9888 1.693 - - - - - 0.937 0.756 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
49. hoxc4a ENSDARG00000070338 1382 1.692 - - - - - 0.965 - - 0.727 homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
50. npb ENSDARG00000078828 230 1.689 0.740 - - - - - - 0.949 - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
51. kif19 ENSDARG00000053026 124 1.687 - - - - - - 0.819 0.868 - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
52. C7H4orf48 C7H4orf48 1455 1.683 - - - - - 0.929 0.754 - -
53. lgi1a ENSDARG00000020493 1218 1.678 - - - - - 0.793 0.885 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
54. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.676 - - - - - 0.893 0.783 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
55. foxn4 ENSDARG00000010591 2332 1.675 - - 0.780 - - - 0.895 - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
56. nrn1a ENSDARG00000071860 1311 1.674 - - - - - 0.909 0.765 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
57. nptx1l ENSDARG00000074671 569 1.673 - - - - - 0.937 0.736 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
58. ptprnb ENSDARG00000077047 2743 1.672 - - - - - - 0.841 0.831 - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
59. CDK5R1 CDK5R1 562 1.668 - - - - - 0.774 0.894 - -
60. adcyap1b ENSDARG00000027740 1539 1.667 - - - - - 0.961 0.706 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
61. sncb ENSDARG00000104945 8197 1.666 - - 0.727 - - 0.939 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
62. MAP4 MAP4 315 1.661 - - - - - 0.939 0.722 - -
63. shisa7 shisa7 181 1.655 - - - - - 0.818 0.837 - -
64. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.654 - - - - - 0.830 0.824 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
65. necap1 ENSDARG00000020798 612 1.648 - - - - - 0.945 - 0.703 - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
66. nmnat2 ENSDARG00000004580 370 1.647 - - - - - 0.879 0.768 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
67. lhx1a ENSDARG00000014018 958 1.646 - - 0.761 - - 0.885 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
68. scrt1a ENSDARG00000100821 2687 1.645 - - 0.706 - - 0.939 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
69. nrxn3b ENSDARG00000062693 192 1.644 - - - - - 0.893 0.751 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
70. otpa ENSDARG00000014201 2290 1.64 - - 0.713 - - 0.927 - - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
71. CR936200.1 CR936200.1 327 1.638 0.876 - - - - 0.762 - - -
72. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.632 - - - - - 0.880 0.752 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
73. zic1 ENSDARG00000015567 2520 1.63 - - - - - 0.875 0.755 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
74. st18 663 1.63 - - - - - 0.887 0.743 - - suppression of tumorigenicity 18, zinc finger
75. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.623 0.718 - - - - 0.905 - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
76. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.621 - - 0.787 - - 0.834 - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
77. entpd3 ENSDARG00000035309 263 1.617 0.875 - - - - 0.742 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
78. eno2 ENSDARG00000014287 2162 1.609 - - - - - 0.851 0.758 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
79. CU856359.2 CU856359.2 182 1.609 - - - - - 0.720 0.889 - -
80. slc6a1b ENSDARG00000039647 1301 1.609 - - - - - 0.774 0.835 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
81. rap2ip rap2ip 681 1.607 - - - - - 0.870 0.737 - -
82. skilb ENSDARG00000022904 300 1.605 - - - - - 0.701 - 0.904 - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
83. tmtc2 tmtc2 798 1.601 - - - - - 0.730 0.871 - -
84. syt11a ENSDARG00000057913 1145 1.598 - - - - - 0.880 0.718 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
85. epb41a ENSDARG00000099283 860 1.598 - - 0.778 - - - 0.820 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
86. ANO8 ANO8 380 1.597 - - 0.743 - - - 0.854 - -
87. si:ch211-202e12.3 401 1.596 - - - - - 0.724 0.872 - - si:ch211-202e12.3, transcript variant X6
88. pax6a ENSDARG00000103379 3061 1.593 - - - - 0.719 0.874 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
89. sulf2l sulf2l 4980 1.593 - - 0.781 - - - 0.812 - -
90. myt1b ENSDARG00000102879 5411 1.593 - - 0.752 - - 0.841 - - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
91. TMEM100_1 TMEM100_1 44 1.592 - - 0.701 - - - 0.891 - -
92. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.592 - - 0.785 - - 0.807 - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
93. vim ENSDARG00000010008 3551 1.59 - - - - - 0.777 0.813 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
94. SHC3 ENSDARG00000098909 332 1.586 - - - - - 0.752 0.834 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
95. KCNAB2 KCNAB2 129 1.584 - - - - - 0.814 0.770 - -
96. fads2 ENSDARG00000019532 152 1.582 - - - - 0.716 - - 0.866 - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
97. phactr3a ENSDARG00000058243 150 1.581 0.871 - - - - 0.710 - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
98. CASS4 ENSDARG00000006775 760 1.575 - - - - - 0.768 0.807 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
99. ZFHX3 ENSDARG00000103057 7759 1.572 - - 0.783 - - 0.789 - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
100. CR388231.1 ENSDARG00000098710 153 1.572 - - - - - 0.860 0.712 - -

There are 1834 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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