Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for grwd1

Gene Name Gene ID Reads Annotation
grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]










Genes with expression patterns similar to grwd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]
2. mrpl48 ENSDARG00000035167 1008 1.617 - 0.834 - - - - - 0.783 - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
3. csrp2bp 2642 1.609 - - - - - - 0.777 0.832 - csrp2 binding protein
4. klhl40a ENSDARG00000039052 2537 1.572 0.703 0.869 - - - - - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
5. RPTOR ENSDARG00000098726, ENSDARG00000116019 420 1.562 - 0.838 - - - 0.724 - - - regulatory associated protein of MTOR, complex 1 [Source:ZFIN;Acc:ZDB-GENE-130530-685]
6. prmt1 ENSDARG00000010246 11311 1.561 - 0.760 - - - - 0.801 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
7. nfe2 ENSDARG00000020606 224 1.56 - 0.749 - - - - - 0.811 - nuclear factor, erythroid 2 [Source:ZFIN;Acc:ZDB-GENE-030124-1]
8. sim1a ENSDARG00000023316 190 1.555 - 0.757 - - - - - 0.798 - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
9. CR855307.1 ENSDARG00000099628 338 1.552 - - - - - - - 0.838 0.714
10. srebf1 ENSDARG00000067607 1537 1.549 - - - - - - 0.788 0.761 - sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
11. skiv2l2 760 1.542 - 0.754 - - - - - 0.788 - superkiller viralicidic activity 2-like 2
12. tmem70 ENSDARG00000078773 1290 1.54 - 0.805 - - - - 0.735 - - transmembrane protein 70 [Source:ZFIN;Acc:ZDB-GENE-070912-593]
13. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.534 - 0.708 - - - - 0.826 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
14. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.524 - - - - - - - 0.784 0.740 tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
15. Sep-06 Sep-06 5465 1.514 - 0.786 - - - - 0.728 - -
16. rars ENSDARG00000054530 1495 1.506 0.757 0.749 - - - - - - - arginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9014]
17. pygma ENSDARG00000055518 15972 1.502 0.714 0.788 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
18. CR384059.2 CR384059.2 139 1.5 - - - - - 0.741 - 0.759 -
19. vcl vcl 6667 1.497 0.702 0.795 - - - - - - -
20. xpnpep3 ENSDARG00000007916 166 1.493 - 0.721 - - - - - 0.772 - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
21. stip1 ENSDARG00000004906 7742 1.481 0.766 - - - - - 0.715 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
22. cct5 ENSDARG00000045399 11572 1.478 0.729 0.749 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
23. zgc:158564 ENSDARG00000052244 954 1.477 - 0.759 - - - 0.718 - - - zgc:158564 [Source:ZFIN;Acc:ZDB-GENE-070112-1662]
24. asap1a ENSDARG00000029463 1566 1.475 0.725 0.750 - - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
25. pik3c2b ENSDARG00000086927 864 1.47 - 0.754 - - - - 0.716 - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
26. larp1b ENSDARG00000061169 9939 1.469 0.708 0.761 - - - - - - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
27. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.467 - 0.710 - - - - 0.757 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
28. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.466 0.732 0.734 - - - - - - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
29. si:ch211-229l10.12 si:ch211-229l10.12 95 1.465 - - - - - 0.710 - 0.755 -
30. foxc1a ENSDARG00000091481 1059 1.452 - 0.726 - - - 0.726 - - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
31. CCDC86 CCDC86 2023 1.445 - 0.743 - 0.702 - - - - -
32. serbp1a ENSDARG00000074242 10818 1.442 0.732 - - - - 0.710 - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
33. sema6a ENSDARG00000102165 1401 1.438 - 0.727 - - - - - 0.711 - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
34. xpo1a ENSDARG00000078041 3544 1.435 - 0.706 - - - - 0.729 - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
35. SLC12A6 SLC12A6 883 1.43 - - - - - - 0.702 0.728 -
36. CUTA CUTA 1149 1.424 - - - - 0.709 - 0.715 - -
37. HYAL2 HYAL2 936 1.423 - 0.707 - - - - 0.716 - -
38. EIF2B5 ENSDARG00000074995 1277 1.42 - 0.716 - - - - - 0.704 - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
39. hfe2 4113 1.41 0.703 0.707 - - - - - - - hemochromatosis type 2
40. hsd17b10 ENSDARG00000017781 1793 0.905 - 0.905 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
41. pdlim7 ENSDARG00000103854 465 0.894 - 0.894 - - - - - - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
42. PHB2 PHB2 3755 0.892 - 0.892 - - - - - - -
43. ATP5J_2 ATP5J_2 2381 0.885 - 0.885 - - - - - - -
44. sp5 sp5 622 0.882 - - - - - - - 0.882 -
45. mrpl46 ENSDARG00000016307 613 0.881 - 0.881 - - - - - - - mitochondrial ribosomal protein L46 [Source:ZFIN;Acc:ZDB-GENE-040718-224]
46. ITGB1BP2 ENSDARG00000030176 2472 0.879 - 0.879 - - - - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
47. CBFA2T3 ENSDARG00000079012 6799 0.877 - 0.877 - - - - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
48. hbae1_1 37308 0.87 - 0.870 - - - - - - - hemoglobin, alpha embryonic 1
49. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 0.868 - 0.868 - - - - - - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
50. GPR89A ENSDARG00000077983 463 0.866 - 0.866 - - - - - - - G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
51. bdnf ENSDARG00000018817 193 0.865 - - - - - - - 0.865 - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
52. SNORD27 SNORD27 181 0.865 - - - - - - - 0.865 -
53. ddx54 ENSDARG00000105286 183 0.864 - 0.864 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]
54. ZFHX2 2463 0.862 - 0.862 - - - - - - - zinc finger homeobox 2, transcript variant X2
55. epb41b ENSDARG00000029019 1472 0.861 - 0.861 - - - - - - - erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
56. GPR156 ENSDARG00000086215 126 0.861 - - - - - - - 0.861 - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
57. fgf4 ENSDARG00000105230 407 0.86 - 0.860 - - - - - - - fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]
58. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 0.859 - 0.859 - - - - - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
59. alpk3a ENSDARG00000078989 1992 0.858 - 0.858 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
60. igdcc4 ENSDARG00000076919 1303 0.858 - 0.858 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
61. nup133 ENSDARG00000010078 2373 0.858 - - - - - - - 0.858 - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
62. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 0.856 - 0.856 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
63. tmem194a tmem194a 745 0.855 - - - - - - - 0.855 -
64. limch1a ENSDARG00000074275 2981 0.855 - 0.855 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
65. has2 ENSDARG00000036987 349 0.854 - 0.854 - - - - - - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
66. acot9.1 ENSDARG00000058352, ENSDARG00000114328 489 0.853 - - - - - - - 0.853 - acyl-CoA thioesterase 9, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-139]
67. ppig ENSDARG00000044431 3427 0.852 - - - - - - 0.852 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
68. fzd7b ENSDARG00000027589 2562 0.852 - 0.852 - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
69. C25H12orf4 C25H12orf4 317 0.85 - - - - - - - 0.850 -
70. CLDND1 CLDND1 155 0.849 - - - - - - - 0.849 -
71. si:dkey-25o16.2 1990 0.848 - 0.848 - - - - - - - si:dkey-25o16.2, transcript variant X1
72. si:dkey-239h2.3 ENSDARG00000092033 398 0.848 - - - - - - - 0.848 - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
73. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.848 - 0.848 - - - - - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
74. cog8 ENSDARG00000002798 229 0.847 - - - - - - - 0.847 - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
75. VPRBP VPRBP 727 0.845 - - - - - - - 0.845 -
76. si:ch211-242b18.1 ENSDARG00000054723 2929 0.843 - 0.843 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
77. WDR53 ENSDARG00000079659 485 0.843 - - - - - - - 0.843 - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
78. TMPO TMPO 3264 0.843 - 0.843 - - - - - - -
79. alad ENSDARG00000100372 1711 0.842 - 0.842 - - - - - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
80. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.842 - 0.842 - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
81. dpp9 ENSDARG00000052606 2279 0.841 - 0.841 - - - - - - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
82. mrpl27 ENSDARG00000032985 2158 0.84 - 0.840 - - - - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
83. nsl1 ENSDARG00000024471 1269 0.84 - - - - - - - 0.840 - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
84. apobec2a ENSDARG00000018881 4790 0.839 - 0.839 - - - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
85. srpk3 ENSDARG00000005916 1546 0.838 - 0.838 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
86. twistnb ENSDARG00000024416 1077 0.837 - 0.837 - - - - - - - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
87. tamm41 ENSDARG00000100157 1116 0.837 - 0.837 - - - - - - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
88. CU929240.1 ENSDARG00000101648 1866 0.837 - 0.837 - - - - - - -
89. FP236812.4 FP236812.4 1244 0.836 - 0.836 - - - - - - -
90. ube2d4 ENSDARG00000015057 1089 0.836 - 0.836 - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
91. vwde ENSDARG00000103443 5758 0.835 - 0.835 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
92. PMFBP1 ENSDARG00000101917 292 0.834 - - - - - - - 0.834 - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
93. pes ENSDARG00000018902 3286 0.834 - 0.834 - - - - - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
94. psmc3 ENSDARG00000007141 5592 0.834 - - - - - - 0.834 - - proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
95. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 0.834 - - - - - - 0.834 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
96. fitm1 ENSDARG00000056464 1759 0.833 - 0.833 - - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
97. aurkb ENSDARG00000037640 4874 0.833 - - - - - - 0.833 - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
98. zgc:101130 ENSDARG00000101926 924 0.832 - - - - - - - 0.832 - zgc:101130 [Source:ZFIN;Acc:ZDB-GENE-040801-72]
99. rin2 ENSDARG00000074589 445 0.832 - 0.832 - - - - - - - Ras and Rab interactor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-194]
100. nsrp1 ENSDARG00000015221 1598 0.832 - - - - - - - 0.832 - nuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]

There are 1102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA