Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for grsf1

Gene Name Gene ID Reads Annotation
grsf1 ENSDARG00000053021 2752 G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]










Genes with expression patterns similar to grsf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. grsf1 ENSDARG00000053021 2752 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
2. ndufab1b ENSDARG00000014915 12796 2.566 - 0.856 - - - - 0.788 - 0.922 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
3. pdcd4a ENSDARG00000021702 7293 2.495 - 0.748 - - - - 0.810 - 0.937 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
4. EEF1E1 ENSDARG00000071774 3806 2.478 - 0.711 - - - - 0.799 - 0.968 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
5. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 2.435 0.751 - - - - 0.809 0.875 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
6. si:ch211-85n16.3 ENSDARG00000096346 1095 2.4 - 0.709 - - - - 0.868 - 0.823 si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
7. ccdc58 ENSDARG00000045351 972 2.364 - 0.806 - - - 0.767 0.791 - - coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
8. rp42-pen rp42-pen 3395 2.359 0.796 0.716 - - - - 0.847 - -
9. CR847973.1 ENSDARG00000115516 8754 2.307 - 0.769 - - - 0.773 0.765 - -
10. slc25a11 ENSDARG00000035741 3377 2.3 - - 0.701 - - 0.739 0.860 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
11. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 2.283 0.742 - - - - 0.704 0.837 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
12. ITGB1BP2 ENSDARG00000030176 2472 2.27 - 0.706 - - - 0.769 0.795 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
13. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 2.239 0.712 0.707 - - - - 0.820 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
14. ehd3 ENSDARG00000007869 3238 2.238 0.751 - - - - 0.721 0.766 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
15. ddx49 ENSDARG00000012899 1604 2.228 0.701 0.706 - - - - 0.821 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
16. SENP7 SENP7 1097 1.806 - - - - - 0.819 - - 0.987
17. hsbp1b ENSDARG00000041921 6170 1.797 - 0.866 - - - - - - 0.931 heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
18. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.791 - - - - - - 0.904 - 0.887 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
19. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.755 - - - - - - 0.794 - 0.961 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
20. cdkal1 ENSDARG00000104848 2102 1.755 - 0.778 - - - - - - 0.977 CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
21. cmip ENSDARG00000062933 4521 1.753 - 0.815 - - - - - - 0.938 c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
22. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.751 - - - - - - 0.788 - 0.963 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
23. cpla2 cpla2 1031 1.746 - - 0.771 - - - - - 0.975
24. LRRC14B ENSDARG00000060788 363 1.739 - - - - - - 0.754 - 0.985 leucine rich repeat containing 14B [Source:ZFIN;Acc:ZDB-GENE-060503-910]
25. eprs ENSDARG00000060494 4729 1.73 - - - - - - 0.777 - 0.953 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
26. PPP1R21 ENSDARG00000103144 385 1.723 - - - - - - 0.739 - 0.984 protein phosphatase 1, regulatory subunit 21 [Source:ZFIN;Acc:ZDB-GENE-041114-8]
27. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.722 - - - - - 0.738 - - 0.984 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
28. asphd2 ENSDARG00000059629 1005 1.718 - - - - - - 0.736 - 0.982 aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
29. ppig ENSDARG00000044431 3427 1.712 - 0.742 - - - - - - 0.970 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
30. mef2cb ENSDARG00000009418 1124 1.706 - - - - - - 0.722 - 0.984 myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
31. ncl1 2835 1.706 - 0.731 - - - - - - 0.975 nicalin, transcript variant X3
32. ARAP2 ARAP2 428 1.697 - - - - - - 0.714 - 0.983
33. mrto4 ENSDARG00000007130 1086 1.696 - 0.847 - - - 0.849 - - - MRT4 homolog, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-050417-142]
34. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.694 0.777 - - - - - 0.917 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
35. TMPO TMPO 3264 1.692 - - - - - - 0.793 - 0.899
36. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.691 - - - - - - 0.834 - 0.857 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
37. wwtr1 ENSDARG00000067719 3484 1.69 - 0.726 - - - - - - 0.964 WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
38. drg2 ENSDARG00000006642 1167 1.688 - 0.805 - - - - 0.883 - - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
39. uhmk1 ENSDARG00000059575 1486 1.682 - - - - - 0.705 - - 0.977 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
40. mrps2 ENSDARG00000103198 2410 1.68 - 0.825 - - - - 0.855 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
41. setd3 ENSDARG00000016513 1507 1.672 - - - - - 0.836 0.836 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
42. mrps9 ENSDARG00000061505 1636 1.672 - - - - - 0.832 0.840 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
43. timm8b ENSDARG00000055708 7291 1.67 - 0.826 - - - - 0.844 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
44. kpna3 ENSDARG00000052641 5347 1.669 - 0.768 - - - - - - 0.901 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
45. rwdd1 ENSDARG00000015930 2380 1.66 - 0.799 - - - - 0.861 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
46. lepre1 lepre1 5346 1.66 - 0.770 - - - - - - 0.890
47. gars ENSDARG00000059070 17015 1.659 - - - - - 0.774 0.885 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
48. ppp1r3cb ENSDARG00000014554 2507 1.65 - 0.793 - - - - 0.857 - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
49. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.638 - 0.830 - - - - 0.808 - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
50. ndufs6 ENSDARG00000056583 7220 1.634 - - - - - 0.764 0.870 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
51. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.633 0.802 - - - - - 0.831 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
52. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.63 0.835 - - - - - 0.795 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
53. hibadhb ENSDARG00000007959 4858 1.628 - - - - - 0.776 0.852 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
54. C19H6orf136 C19H6orf136 1387 1.628 - - - - - 0.806 0.822 - -
55. cluh cluh 3851 1.627 0.817 - - - - - 0.810 - -
56. fermt2 ENSDARG00000020242 9351 1.626 - - - - - - 0.816 - 0.810 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
57. celf1 ENSDARG00000005315 5598 1.624 - 0.912 - - - - 0.712 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
58. C22H19orf70 C22H19orf70 4393 1.618 - - - - - 0.728 0.890 - -
59. tomm34 ENSDARG00000001557 1874 1.617 - - - - - 0.779 0.838 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
60. cyc1 ENSDARG00000038075 16699 1.616 - - - - - 0.819 0.797 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
61. SERP1 ENSDARG00000076223 2528 1.612 - - - - - 0.825 0.787 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
62. THOP1 ENSDARG00000013776 2717 1.611 0.744 - - - - - 0.867 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
63. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.61 - 0.789 - - - - - - 0.821 hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
64. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.606 - 0.769 - - - - 0.837 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
65. qars ENSDARG00000010316 2715 1.602 - 0.844 - - - - 0.758 - - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
66. myom1a ENSDARG00000061249 10230 1.602 - - - - - 0.781 0.821 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
67. mccc2 ENSDARG00000017571 5635 1.601 - - - - - - 0.740 - 0.861 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
68. esd ENSDARG00000019496 3192 1.596 - 0.751 - - - - 0.845 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
69. arhgef2 ENSDARG00000075819 2173 1.594 - 0.773 - - - 0.821 - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
70. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.589 - - - - - 0.753 0.836 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
71. rab5if ENSDARG00000074790 8807 1.589 - 0.810 - - - - 0.779 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
72. rbmx ENSDARG00000014244 3445 1.588 0.713 0.875 - - - - - - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
73. chrna1 ENSDARG00000009021 2931 1.587 - 0.756 - - - - 0.831 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
74. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.581 0.781 - - - - - 0.800 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
75. nploc4 ENSDARG00000100487 1262 1.578 - 0.773 - - - 0.805 - - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
76. znf106a ENSDARG00000016651 6049 1.577 - 0.810 - - - - 0.767 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
77. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 1.577 - - - - - 0.811 0.766 - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
78. ndufb11 ENSDARG00000043467 7495 1.576 - - - - - 0.703 0.873 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
79. vbp1 ENSDARG00000030241 10619 1.575 0.751 - - - - 0.824 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
80. acadm ENSDARG00000038900 2319 1.574 - - - - - 0.775 0.799 - - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
81. ntmt1 ENSDARG00000022399 5779 1.574 - 0.714 - - - - 0.860 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
82. nid1a ENSDARG00000068710 3948 1.573 - - - - - 0.728 0.845 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
83. tcf7l1b ENSDARG00000007369 2785 1.573 - - - - - 0.791 0.782 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
84. dnajc15 ENSDARG00000038309 1274 1.572 - 0.745 - - - - 0.827 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
85. acsl1 acsl1 4216 1.568 - - - - - 0.746 0.822 - -
86. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.564 - - - - - - 0.706 - 0.858 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
87. atp5j 4272 1.563 - 0.802 - - - - 0.761 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
88. flot2a ENSDARG00000004830 5276 1.561 0.746 - - - - 0.815 - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
89. ppp5c ENSDARG00000034313 8794 1.56 0.726 - - - - 0.834 - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
90. nmrk2 ENSDARG00000067848 10293 1.559 - 0.713 - - - - 0.846 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
91. chrnd ENSDARG00000019342 2728 1.555 - 0.764 - - - - 0.791 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
92. eif3ha ENSDARG00000102452 9238 1.554 0.769 - - - - - 0.785 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
93. pbxip1a ENSDARG00000071015 4960 1.554 - 0.736 - - - - 0.818 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
94. eif4h ENSDARG00000042252 6742 1.551 - 0.791 - - - - 0.760 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
95. yars ENSDARG00000035913, ENSDARG00000113430 2043 1.551 - 0.747 - - - 0.804 - - - tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
96. zgc:158296 ENSDARG00000070923 3935 1.546 - 0.713 - - - - 0.833 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
97. mdh1b ENSDARG00000018008 3196 1.542 0.736 - - - - - 0.806 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
98. kcnma1a ENSDARG00000079840 2584 1.541 - 0.780 - - - - 0.761 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
99. fam13a ENSDARG00000075564 1905 1.537 - 0.704 - - - - 0.833 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
100. srl ENSDARG00000104587 11126 1.535 0.714 - - - - - 0.821 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]

There are 1362 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA