Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for grn1

Gene Name Gene ID Reads Annotation
grn1 ENSDARG00000089362 20 granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]










Genes with expression patterns similar to grn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. grn1 ENSDARG00000089362 20 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
2. si:dkey-176g4.5 si:dkey-176g4.5 4 2.728 - - - 0.888 - - 1.000 0.840 -
3. BX323876.2 ENSDARG00000104577 62 2.616 - - 0.955 0.899 - 0.762 - - -
4. sst2 ENSDARG00000014190 617 2.556 - - 0.892 - - - 0.755 0.909 - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
5. BX571880.1 ENSDARG00000097533 499 2.458 - - 0.833 0.796 - - - 0.829 -
6. cdc25d ENSDARG00000075599 7 2 - 1.000 - - - - 1.000 - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
7. bckdhb ENSDARG00000014676 17 2 - 1.000 - - - - 1.000 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
8. CU652893.1 ENSDARG00000104131 3 1.979 - - - - 0.979 - 1.000 - -
9. si:ch211-274p24.2 ENSDARG00000095185 92 1.979 - - - - 0.979 - 1.000 - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
10. slc7a9 ENSDARG00000005894 29 1.957 - - - - 0.957 - 1.000 - - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
11. flt3 ENSDARG00000058503 32 1.955 - - 0.955 - - - 1.000 - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
12. si:dkey-58f10.13 ENSDARG00000095532 11 1.955 - - 0.955 - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
13. zgc:92249 14 1.952 - - - - - - 1.000 0.952 - zgc:92249
14. si:ch211-191a16.3 si:ch211-191a16.3 31 1.91 - - - 0.910 - - 1.000 - -
15. CABZ01054405.2 CABZ01054405.2 46 1.906 0.906 - - - - - 1.000 - -
16. il34 ENSDARG00000091003 14 1.906 0.906 - - - - - 1.000 - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
17. purg ENSDARG00000099187, ENSDARG00000114450 33 1.888 0.888 1.000 - - - - - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
18. themis ENSDARG00000010619 5 1.865 - - - - 0.865 - 1.000 - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
19. CABZ01085054.1 CABZ01085054.1 20 1.864 - 0.864 - - - - 1.000 - -
20. si:dkey-28d5.13 ENSDARG00000077260 3 1.852 - - - 0.910 0.942 - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
21. lim2.2 ENSDARG00000059015 11 1.826 - - 0.826 - - - 1.000 - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
22. star ENSDARG00000006137 149 1.825 - - - - - - 1.000 0.825 - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
23. si:ch73-44m9.2 ENSDARG00000094821 101 1.82 0.820 - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
24. amn ENSDARG00000062947 36 1.815 - - - - 0.815 - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
25. FAM83F FAM83F 8 1.799 - - 0.929 0.870 - - - - -
26. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 1.786 - 0.786 - - - - 1.000 - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
27. zgc:162184 ENSDARG00000077217 47 1.778 - 1.000 - - - - 0.778 - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
28. CABZ01072557.1 CABZ01072557.1 9 1.771 - 1.000 - - 0.771 - - - -
29. lsm14b ENSDARG00000025386 23 1.763 - - - 0.763 - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
30. TRIM35_1 TRIM35_1 11 1.762 - - - - - 0.762 1.000 - -
31. CABZ01088134.1 ENSDARG00000033587 4 1.762 - - - - - 0.762 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
32. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1.762 - - - - - 0.762 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
33. nceh1a ENSDARG00000020427 35 1.762 - - - - - 0.762 1.000 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
34. GMNC ENSDARG00000068719 28 1.762 - - - - - 0.762 1.000 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
35. syne3 ENSDARG00000023237 23 1.762 - - - - - 0.762 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
36. tpbgl ENSDARG00000114338 5 1.762 - - - - - 0.762 1.000 - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
37. zgc:165453 ENSDARG00000078183 3 1.75 - - - 0.910 - - - 0.840 - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
38. VDAC3 ENSDARG00000003695 34 1.739 - - 0.739 - - - 1.000 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
39. ptger4a ENSDARG00000059236 13 1.729 - 0.729 - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
40. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1.729 - 0.729 - - - - 1.000 - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
41. MSH4 ENSDARG00000075826 37 1.729 - 0.729 - - - - 1.000 - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
42. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1.729 - 0.729 - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
43. DLK1 60 1.729 - 0.729 - - - - 1.000 - - delta like non-canonical Notch ligand 1
44. CU459094.1 ENSDARG00000110517 17 1.729 - 0.729 - - - 1.000 - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
45. tchp ENSDARG00000035605 1695 1.727 - 0.918 - - - - 0.809 - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
46. BX572619.7 BX572619.7 31 1.727 - - - - - - 0.915 0.812 -
47. cttnbp2nl cttnbp2nl 166 1.706 - 0.706 - - - - 1.000 - -
48. SLC26A3 SLC26A3 8 1.698 - - 0.955 - 0.743 - - - -
49. FP245525.1 FP245525.1 3 1.692 0.906 - - - 0.786 - - - -
50. HEATR2 HEATR2 6 1.689 - - 0.792 0.897 - - - - -
51. oard1 ENSDARG00000057426, ENSDARG00000110693 42 1.682 - - 0.904 - - - 0.778 - - O-acyl-ADP-ribose deacylase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-480]
52. CLNK 8 1.681 - - - 0.910 - - - - 0.771 cytokine dependent hematopoietic cell linker
53. klc1a ENSDARG00000009796 10 1.672 0.906 - 0.766 - - - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
54. rgs13 ENSDARG00000017653 8 1.669 - - - 0.910 - - 0.759 - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
55. dnase1l3l dnase1l3l 16 1.658 - - 0.826 0.832 - - - - -
56. adh8a ENSDARG00000091211, ENSDARG00000113750 19 1.631 0.828 0.803 - - - - - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
57. CABZ01087025.1 ENSDARG00000117232 10 1.622 - 0.729 - 0.893 - - - - -
58. ARHGEF40 ENSDARG00000078979 25 1.599 - 0.853 - - - - - 0.746 - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
59. si:ch73-60p2.1 si:ch73-60p2.1 21 1.59 0.706 0.884 - - - - - - -
60. si:dkey-220o21.5 si:dkey-220o21.5 24 1.58 - - - 0.818 - 0.762 - - -
61. CR936975.1 ENSDARG00000096862 22 1.576 - 0.729 - - 0.847 - - - -
62. si:dkey-188k17.2 7 1.569 - 0.729 - - - - - 0.840 - si:dkey-188k17.2
63. tnni3k ENSDARG00000086933 37 1.565 - 0.729 - 0.836 - - - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
64. zgc:193690 34 1.547 - 0.729 - - - - 0.818 - - zgc:193690
65. si:ch211-244b2.4 ENSDARG00000045530 32 1.542 - 0.830 - - 0.712 - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
66. msgn1 ENSDARG00000070546 188 1.507 - - - - - 0.762 0.745 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
67. cyp2p7 ENSDARG00000042980 29 1.506 - 0.792 - - 0.714 - - - - cytochrome P450, family 2, subfamily P, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-041001-155]
68. BX950188.1 ENSDARG00000044326 47 1.501 - 0.703 - 0.798 - - - - -
69. hist2h3c_1 ENSDARG00000094154 45 1.496 - - - 0.734 - 0.762 - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
70. itln1 ENSDARG00000007534 8 1.491 - 0.729 - - - 0.762 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
71. gata2b ENSDARG00000009094 16 1.491 - 0.729 - - - 0.762 - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
72. jam3a ENSDARG00000114589 630 1.491 - 0.729 - - - 0.762 - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
73. wu:fb37b09 wu:fb37b09 10685 1.491 - 0.729 - - - 0.762 - - -
74. si:dkey-220k22.3 ENSDARG00000094693 166 1.474 - 0.729 - - - - 0.745 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
75. CR388047.3 ENSDARG00000117023 89 1.469 - - - 0.762 0.707 - - - -
76. mpz ENSDARG00000038609 1740 1.438 - 0.729 - - - 0.709 - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
77. si:ch211-268b13.3 si:ch211-268b13.3 28 1.431 - 0.729 - 0.702 - - - - -
78. si:dkey-6o1.2 si:dkey-6o1.2 12 1 - - - - - - 1.000 - -
79. cep68 ENSDARG00000039411 30 1 - - - - - - 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
80. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
81. BX664625.1 ENSDARG00000043131 8 1 - - - - - - 1.000 - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
82. def8 ENSDARG00000068208 50 1 - - - - - - 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
83. TNFSF14 ENSDARG00000111357 2 1 - - - - - - 1.000 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
84. mocs1 ENSDARG00000078479 1 1 - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]
85. CR354540.1 ENSDARG00000004051 10 1 - - - - - - 1.000 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
86. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - 1.000 - -
87. si:ch211-139g16.8 ENSDARG00000093074 13 1 - - - - - - 1.000 - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
88. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 1 - 1.000 - - - - - - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
89. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - - 1.000 - -
90. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
91. SLC2A4RG SLC2A4RG 47 1 - - - - - - 1.000 - -
92. BX537350.1 BX537350.1 8 1 - - - - - - 1.000 - -
93. si:ch73-388k15.1 si:ch73-388k15.1 0 1 - - - - - - 1.000 - -
94. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
95. sycp1 ENSDARG00000003904 8 1 - - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
96. tuba7l ENSDARG00000104643 33 1 - - - - - - 1.000 - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
97. CU633991.1 CU633991.1 16 1 - - - - - - 1.000 - -
98. CABZ01076234.1 CABZ01076234.1 49 1 - - - - - - 1.000 - -
99. VWDE ENSDARG00000103443 10 1 - - - - - - 1.000 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
100. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]

There are 1337 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA