Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for grid2ipb

Gene Name Gene ID Reads Annotation
grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]










Genes with expression patterns similar to grid2ipb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
2. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1.929 - 0.960 - 0.969 - - - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
3. BX640537.1 ENSDARG00000099408 192 1.875 - - - 0.941 - - 0.934 - -
4. foxl1 ENSDARG00000008133, ENSDARG00000111418 64 1.866 - - - - - 1.000 0.866 - - forkhead box L1 [Source:ZFIN;Acc:ZDB-GENE-040426-1181]
5. sik2a ENSDARG00000079618, ENSDARG00000115529 65 1.857 - - - 0.964 0.893 - - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
6. kcnf1a ENSDARG00000027940 155 1.843 - - - 0.960 0.883 - - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
7. lmx1a ENSDARG00000020354 111 1.829 - - - 0.958 - - - 0.871 - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
8. pdzd3b ENSDARG00000055656 3 1.824 - - - - - - 0.953 - 0.871 PDZ domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-081022-151]
9. CU570987.1 CU570987.1 7 1.816 - - - - - 0.883 - 0.933 -
10. ppapdc2 ppapdc2 67 1.812 - - - - - - 0.923 0.889 -
11. CCDC96 ENSDARG00000035963 5 1.812 - - - - - 1.000 - - 0.812 coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
12. cryba2a ENSDARG00000030349 1342 1.803 0.814 - - - - - 0.989 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
13. gal3st1 gal3st1 108 1.797 0.845 - - 0.952 - - - - -
14. etaa1 ENSDARG00000074915 123 1.794 - - - 0.934 0.860 - - - - ETAA1, ATR kinase activator [Source:ZFIN;Acc:ZDB-GENE-080204-12]
15. tcf23 ENSDARG00000087381 6 1.791 0.908 - - - - 0.883 - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
16. CABZ01049058.1 CABZ01049058.1 7 1.791 0.908 - - - - 0.883 - - -
17. kcnh6 kcnh6 59 1.782 - - - 0.960 - - - 0.822 -
18. si:ch211-281p14.2 22 1.781 - - 0.859 - - - - 0.922 - si:ch211-281p14.2, transcript variant X2
19. zgc:110191 zgc:110191 359 1.777 - - - 0.892 - - 0.885 - -
20. fastkd1 ENSDARG00000056128 141 1.759 - 0.847 - 0.912 - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
21. SNORA54 SNORA54 232 1.751 - - - 0.868 - - - 0.883 -
22. slc15a1a ENSDARG00000100315 23 1.75 - - - - - 0.883 - 0.867 - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
23. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.737 0.854 - - - - 0.883 - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
24. CR354382.1 CR354382.1 42 1.736 - - - - - 0.883 - - 0.853
25. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.734 0.908 - - - - - - 0.826 - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
26. 5S_rRNA_16 5S_rRNA_16 10 1.71 - 0.766 - - - 0.944 - - -
27. si:ch211-137i24.12 ENSDARG00000094537 35 1.704 - - - - 0.821 0.883 - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
28. LARP4 LARP4 48 1.702 - - - - - 0.883 - 0.819 -
29. zp2.1 ENSDARG00000086352 41 1.702 0.908 - - - - - 0.794 - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
30. gsdf ENSDARG00000075301 6 1.699 - 0.766 - - - - - 0.933 - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
31. slc44a1a ENSDARG00000015946 10 1.699 - 0.766 - - - - - 0.933 - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
32. VSIG10L ENSDARG00000089237 12 1.697 0.814 - - - - 0.883 - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
33. CR847906.1 ENSDARG00000099493 88 1.697 - - - - - - 0.923 0.774 - protein NLRC3-like [Source:NCBI gene;Acc:571651]
34. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 1.696 0.866 - - - - 0.830 - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
35. TTC18 TTC18 58 1.69 - 0.864 - - - 0.826 - - -
36. 5S_rRNA_20 5S_rRNA_20 79 1.686 - - 0.768 - - - 0.918 - -
37. nipa1 ENSDARG00000055917 132 1.685 0.908 0.777 - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
38. PLB1 PLB1 20 1.683 0.908 - - - - - - 0.775 -
39. METTL12 METTL12 415 1.666 - - - 0.924 - - 0.742 - -
40. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1.666 0.908 - - - - - 0.758 - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
41. CENPA 63 1.661 0.778 - - - - - 0.883 - - histone H3-like centromeric protein A
42. deptor ENSDARG00000040930 191 1.657 - - 0.749 0.908 - - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
43. si:dkeyp-35e5.9 ENSDARG00000103527 24 1.655 0.772 - - - - 0.883 - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
44. MYO1C MYO1C 140 1.652 - - - 0.919 0.733 - - - -
45. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.649 - 0.766 - - - 0.883 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
46. FAM149A ENSDARG00000073709 7 1.649 - 0.766 - - - 0.883 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
47. stxbp4 ENSDARG00000076997 20 1.649 - 0.766 - - - 0.883 - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
48. dpyda dpyda 12 1.649 - 0.766 - - - 0.883 - - -
49. akt3a ENSDARG00000104810 21 1.648 - - - - 0.765 0.883 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
50. hoxd13a ENSDARG00000059256 1190 1.642 0.713 - - - - - 0.929 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
51. nrd1 nrd1 324 1.634 - - - 0.845 - - 0.789 - -
52. rasal3 ENSDARG00000089933 17 1.628 0.908 - - - - 0.720 - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
53. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1.628 0.908 - - - - 0.720 - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
54. mtrf1l ENSDARG00000060005 177 1.626 - 0.703 - 0.923 - - - - - mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
55. si:ch211-198c19.2 si:ch211-198c19.2 165 1.625 0.734 - - - - - - 0.891 -
56. nrxn2b ENSDARG00000063150 343 1.622 - - - 0.821 - - 0.801 - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
57. pax3a ENSDARG00000010192 626 1.621 - 0.852 - 0.769 - - - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
58. ugt2b3 46 1.617 0.908 0.709 - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
59. dzip1l ENSDARG00000074265 61 1.616 - - - - 0.809 0.807 - - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
60. ttll9 ENSDARG00000062806 89 1.616 - - - - - - 0.871 0.745 - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
61. sema6d ENSDARG00000002748 133 1.615 0.908 - - - - - 0.707 - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
62. H2AFX_1 H2AFX_1 28 1.613 - - 0.730 - - 0.883 - - -
63. si:dkey-209n16.2 ENSDARG00000095914 27 1.606 - - - - - - 0.869 0.737 - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
64. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.598 - 0.766 - - - 0.832 - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
65. ggt1b ENSDARG00000018342 49 1.595 0.800 - - - 0.795 - - - - gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
66. psme1 ENSDARG00000002165, ENSDARG00000115834 72 1.593 - 0.766 - - - - 0.827 - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
67. SEC14L1 ENSDARG00000101792 4 1.585 - 0.766 - - - - - - 0.819 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
68. efhc2 ENSDARG00000004204 59 1.584 0.817 - - - 0.767 - - - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
69. pdss2 ENSDARG00000012563 984 1.581 - 0.810 - - - - - 0.771 - prenyl (decaprenyl) diphosphate synthase, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040718-43]
70. dvl1b ENSDARG00000055552 146 1.579 - - - - - 0.771 0.808 - - dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
71. hamp2 hamp2 67 1.577 - 0.766 - - - - 0.811 - -
72. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.573 - 0.766 - - - - - 0.807 - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
73. sc:d0413 sc:d0413 121 1.573 - 0.709 - - - - 0.864 - -
74. ptpdc1 ptpdc1 281 1.563 0.815 - - - 0.748 - - - -
75. si:ch211-245h7.2 si:ch211-245h7.2 317 1.562 0.827 0.735 - - - - - - -
76. ODF3L2 40 1.558 0.702 - - - 0.856 - - - - outer dense fiber of sperm tails 3-like 2
77. ccbl1 702 1.555 0.853 - - 0.702 - - - - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
78. CABZ01112358.1 CABZ01112358.1 667 1.55 - - - 0.820 0.730 - - - -
79. crmp1 ENSDARG00000056742 332 1.541 0.839 0.702 - - - - - - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
80. KLB ENSDARG00000076294 595 1.539 - - 0.839 - 0.700 - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
81. AL954146.5 AL954146.5 202 1.537 0.816 - - - 0.721 - - - -
82. BX470211.1 ENSDARG00000105629 111 1.526 - - - - - 0.724 0.802 - -
83. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1.517 - - - - - - - 0.808 0.709 toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
84. cdc16 ENSDARG00000055470, ENSDARG00000111307 347 1.514 - 0.705 - 0.809 - - - - - cell division cycle 16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051113-132]
85. npsn ENSDARG00000010423 768 1.51 - - - 0.710 - 0.800 - - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
86. STYK1_1 STYK1_1 34 1.507 0.783 - - - - 0.724 - - -
87. cacng6b ENSDARG00000046079 258 1.502 - 0.798 - 0.704 - - - - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
88. SNORD36_1 SNORD36_1 44 1.501 - 0.772 0.729 - - - - - -
89. abca2 ENSDARG00000013500 91 1.501 - - - - - 0.710 0.791 - - ATP-binding cassette, sub-family A (ABC1), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-1]
90. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.497 - - - 0.771 0.726 - - - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
91. si:dkeyp-59c12.1 ENSDARG00000038112 186 1.485 - 0.741 - - - - 0.744 - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
92. tp53i11b ENSDARG00000006025 569 1.483 0.722 - - 0.761 - - - - - tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
93. tk2 ENSDARG00000046127, ENSDARG00000111531 204 1.482 - - - - - - 0.738 0.744 - thymidine kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-243]
94. pde10a ENSDARG00000003449 60 1.477 - 0.757 - - - 0.720 - - - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
95. mamdc1 mamdc1 156 1.471 - 0.702 - 0.769 - - - - -
96. amt ENSDARG00000010862, ENSDARG00000113280 367 1.471 - - - - 0.749 - 0.722 - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
97. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 1.469 - 0.706 - - - 0.763 - - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
98. ITGAE ITGAE 53 1.437 0.713 - - - - 0.724 - - -
99. BX005085.3 ENSDARG00000103450 45 1 1.000 - - - - - - - -
100. cyp2p6 ENSDARG00000042978 46 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]

There are 1663 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA