Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gria1b

Gene Name Gene ID Reads Annotation
gria1b ENSDARG00000032714, ENSDARG00000111658 12 glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]










Genes with expression patterns similar to gria1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gria1b ENSDARG00000032714, ENSDARG00000111658 12 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
2. si:ch211-232m10.6 ENSDARG00000070931 2 2 1.000 - - 1.000 - - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
3. si:dkey-179o14.4 si:dkey-179o14.4 2 2 1.000 - - 1.000 - - - - -
4. SLC35A3_1 SLC35A3_1 35 1.982 1.000 - - - - - - 0.982 -
5. CU633857.1 ENSDARG00000115315 21 1.963 - - - 1.000 - - - 0.963 - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
6. RBBP6 ENSDARG00000037919 3 1.897 - - - 1.000 0.897 - - - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
7. arhgap15 ENSDARG00000062349 28 1.87 1.000 - - - - - - 0.870 - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
8. zgc:158654 19 1.818 - - - - 1.000 - - - 0.818 zgc:158654, transcript variant X1
9. PFKL PFKL 9 1.803 - - - - 0.803 - - - 1.000
10. si:ch211-259i2.2 si:ch211-259i2.2 45 1.796 0.796 - - - 1.000 - - - -
11. C25H19orf40 C25H19orf40 17 1.757 1.000 - 0.757 - - - - - -
12. RBM20 74 1.749 0.773 - - - - - - 0.976 - RNA binding motif protein 20, transcript variant X1
13. KCNK7 ENSDARG00000057331 5 1.733 1.000 - - - - - - - 0.733 potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
14. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1.733 - - - - 1.000 - - - 0.733 tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
15. C1S_1 C1S_1 11 1.733 1.000 - - - - - - - 0.733
16. CU062632.1 ENSDARG00000117236 0 1.733 - - - 1.000 - - - - 0.733 ubiquitin-conjugating enzyme E2O [Source:NCBI gene;Acc:101883975]
17. si:dkey-218i12.3 si:dkey-218i12.3 4 1.733 - - - - 1.000 - - - 0.733
18. si:ch211-168h21.3 10 1.733 1.000 - - - - - - - 0.733 si:ch211-168h21.3
19. apnl ENSDARG00000090900 21 1.711 - - - - - - - 0.978 0.733 actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
20. hgd ENSDARG00000058005 437 1.61 - - 0.840 - - - - 0.770 - homogentisate 1,2-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-020802-5]
21. GRINA GRINA 12 1.594 - - 0.876 - 0.718 - - - -
22. zgc:174224 ENSDARG00000093875 4 1.484 0.751 - - - - - - - 0.733 zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
23. dyx1c1 dyx1c1 36 1.481 - - 0.748 - - - - - 0.733
24. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.477 - - - 0.761 - - - - 0.716 gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
25. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
26. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
27. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
28. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
29. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
30. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
31. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 - - - - - - - - 1.000 NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
32. ompa ENSDARG00000105218 3 1 - - - 1.000 - - - - - olfactory marker protein a [Source:ZFIN;Acc:ZDB-GENE-050626-118]
33. CR339051.1 CR339051.1 9 1 - - - 1.000 - - - - -
34. glsa ENSDARG00000062812 1 1 - - - 1.000 - - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
35. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 1.000 - - - - - - - -
36. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
37. spg20a 8 1 - - - 1.000 - - - - - spastic paraplegia 20a (Troyer syndrome), transcript variant X1
38. prph2a ENSDARG00000038018 2 1 - - - 1.000 - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
39. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
40. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
41. ANO7 ANO7 54 1 1.000 - - - - - - - -
42. or135-1 ENSDARG00000053648 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 135, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-32]
43. ETS1 ENSDARG00000024431 6 1 - - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
44. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
45. tcnl ENSDARG00000068088 0 1 - - - 1.000 - - - - - transcobalamin like [Source:ZFIN;Acc:ZDB-GENE-060531-123]
46. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
47. iqcd ENSDARG00000035551 7 1 - - - 1.000 - - - - - IQ motif containing D [Source:ZFIN;Acc:ZDB-GENE-060526-200]
48. zgc:153441 ENSDARG00000054797 9 1 1.000 - - - - - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
49. C5AR1 1 1 - - - - 1.000 - - - - C5a anaphylatoxin chemotactic receptor
50. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - 1.000 - - - -
51. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
52. TACR3 TACR3 1 1 - - - - 1.000 - - - -
53. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
54. hcrt ENSDARG00000070932 4 1 - - - - 1.000 - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
55. sult3st2 ENSDARG00000093619, ENSDARG00000110806 1 1 - - - - 1.000 - - - - sulfotransferase family 3, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1135]
56. hs3st2 ENSDARG00000059616 2 1 - - - 1.000 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
57. CU459095.1 CU459095.1 7 1 - - - 1.000 - - - - -
58. FRMD7 ENSDARG00000068958 17 1 - - - 1.000 - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
59. ADAM12 ENSDARG00000116062 35 1 1.000 - - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
60. CT027682.2 CT027682.2 0 1 - - - - 1.000 - - - -
61. lrp6 ENSDARG00000100143 1 1 - - - 1.000 - - - - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
62. plscr3a ENSDARG00000093078 7 1 - - - 1.000 - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
63. FOXL2 239 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
64. KIF9 ENSDARG00000031693 11 1 - - - 1.000 - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
65. AC024175.11 AC024175.11 12 1 - - - 1.000 - - - - -
66. FP103005.1 ENSDARG00000099852 4 1 - - - 1.000 - - - - -
67. SNORA3 SNORA3 0 1 - - - 1.000 - - - - -
68. LRFN4 LRFN4 59 1 1.000 - - - - - - - -
69. KRT18_1 KRT18_1 17 1 1.000 - - - - - - - -
70. ZBED1_2 ZBED1_2 0 1 - - - - 1.000 - - - -
71. fam129ab ENSDARG00000023053 1 1 1.000 - - - - - - - - family with sequence similarity 129, member Ab [Source:ZFIN;Acc:ZDB-GENE-070912-688]
72. DUSP19 DUSP19 10 1 - - - - 1.000 - - - -
73. si:ch73-127m5.3 si:ch73-127m5.3 1 1 1.000 - - - - - - - -
74. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
75. si:dkeyp-8h3.9 si:dkeyp-8h3.9 3 1 - - - 1.000 - - - - -
76. VPS13B VPS13B 1 1 1.000 - - - - - - - -
77. phc2b ENSDARG00000013224 3 1 - - - - 1.000 - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
78. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
79. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab
80. plekhs1 ENSDARG00000079227 4 1 - - - - 1.000 - - - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
81. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 1.000 - - - - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
82. si:ch211-209n20.58 si:ch211-209n20.58 1 1 - - - 1.000 - - - - -
83. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - - 1.000 - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
84. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
85. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
86. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
87. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - - - - 1.000
88. PSMB11 PSMB11 3 1 - - - 1.000 - - - - -
89. CABZ01067072.1 CABZ01067072.1 17 1 - - - 1.000 - - - - -
90. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
91. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - - - 1.000
92. SLC16A7 ENSDARG00000098258 4 1 - - - - 1.000 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
93. lpar5b ENSDARG00000068638 2 1 1.000 - - - - - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
94. mir18a 0 1 - - - - 1.000 - - - - microRNA 18a
95. ptprub_1 ENSDARG00000101081 0 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
96. zgc:173552 ENSDARG00000105345, ENSDARG00000110909, ENSDARG00000112175 0 1 - - - 1.000 - - - - - zgc:173552 [Source:ZFIN;Acc:ZDB-GENE-080220-24]
97. nkiras2_1 ENSDARG00000052594 31 1 1.000 - - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
98. asf1ba_1 ENSDARG00000101037 3 1 - - - - 1.000 - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
99. zgc:195633_2 34 1 1.000 - - - - - - - - zgc:195633
100. WIPF1 WIPF1 32 1 - - - - - - - - 1.000

There are 845 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA