Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gria1a

Gene Name Gene ID Reads Annotation
gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]










Genes with expression patterns similar to gria1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
2. her4.3 ENSDARG00000070770 613 2.993 - - - 0.787 - 0.701 - 0.765 0.740 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
3. cdkn2d ENSDARG00000094176 190 2.429 - 0.808 - - - 0.746 0.875 - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
4. evx2 ENSDARG00000059255 317 2.299 - 0.728 - - - 0.805 0.766 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
5. slc17a6a ENSDARG00000001127 337 2.297 - - - - - - 0.770 0.763 0.764 solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
6. dtnbp1b ENSDARG00000055206 64 2.292 - 0.795 - - - 0.719 0.778 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
7. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.276 - - - - - 0.783 0.757 0.736 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
8. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 2.27 - 0.793 - 0.727 - - - 0.750 - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
9. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.19 - - - - - 0.735 0.754 - 0.701 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
10. dpysl3 ENSDARG00000002587 4381 2.188 - - - - - 0.725 0.735 - 0.728 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
11. elavl4 ENSDARG00000045639 998 2.134 - - - - - 0.721 0.711 - 0.702 ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
12. gabrg2 ENSDARG00000053665 434 2.131 - - - - - 0.713 0.713 - 0.705 gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
13. BX890577.2 BX890577.2 94 1.763 - 0.928 - 0.835 - - - - -
14. PPP2R5B ENSDARG00000054931 213 1.754 - - - 0.910 - 0.844 - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
15. polr3c ENSDARG00000057562 123 1.747 - - - 0.872 - 0.875 - - - polymerase (RNA) III (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-040426-992]
16. dnaaf1 ENSDARG00000012030 58 1.725 - 0.813 - 0.912 - - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
17. camk4 ENSDARG00000005372 118 1.718 - - - 0.916 - - 0.802 - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
18. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.714 - - - - - 0.917 0.797 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
19. kcnip1a 101 1.71 - - - - - 0.801 0.909 - - Kv channel interacting protein 1 a
20. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.677 - - - - - 0.818 0.859 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
21. golt1ba ENSDARG00000022795 121 1.643 - - - 0.801 - 0.842 - - - golgi transport 1Ba [Source:ZFIN;Acc:ZDB-GENE-041210-157]
22. pcdh8 ENSDARG00000006467 317 1.636 - - - 0.861 - 0.775 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
23. cdk5r1a ENSDARG00000037916 46 1.628 - - - - - 0.866 0.762 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
24. ankk1 ENSDARG00000056921 119 1.624 - - - 0.876 - 0.748 - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
25. gbx1 ENSDARG00000071418 871 1.62 - - - 0.815 - - 0.805 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
26. odz4 odz4 822 1.618 - - - - - 0.811 - 0.807 -
27. FP102892.2 FP102892.2 809 1.618 - - - - - 0.865 0.753 - -
28. dlgap1b ENSDARG00000037415 658 1.614 - 0.747 - 0.867 - - - - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
29. hoxc13b ENSDARG00000113877 549 1.613 0.731 - - 0.882 - - - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
30. glcea ENSDARG00000005095 33 1.605 - - - - - 0.843 0.762 - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
31. tspan13b ENSDARG00000070479 542 1.604 - - - 0.874 - 0.730 - - - tetraspanin 13b [Source:ZFIN;Acc:ZDB-GENE-041010-45]
32. map1aa ENSDARG00000059601 599 1.602 - - - - - 0.788 0.814 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
33. scn1bb ENSDARG00000105003 239 1.593 - - - - - 0.842 0.751 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
34. jarid2a ENSDARG00000060925 172 1.591 - - - 0.817 - - 0.774 - - jumonji, AT rich interactive domain 2a [Source:ZFIN;Acc:ZDB-GENE-061218-1]
35. znf804a ENSDARG00000027079 121 1.585 - 0.768 - - - 0.817 - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
36. NPTXR NPTXR 241 1.58 - - - - - 0.845 0.735 - -
37. grin1a ENSDARG00000027828 1327 1.579 - 0.832 - - - 0.747 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
38. syt12 ENSDARG00000101776 215 1.575 - - - - - 0.815 0.760 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
39. ndrg1b ENSDARG00000010420 116 1.575 - 0.813 - - - - 0.762 - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
40. ankrd55 ENSDARG00000099182 50 1.574 - - - - - 0.816 0.758 - - ankyrin repeat domain 55 [Source:ZFIN;Acc:ZDB-GENE-080104-7]
41. azi1 azi1 507 1.562 - 0.747 - 0.815 - - - - -
42. si:dkey-154b15.1 ENSDARG00000057010 85 1.558 0.796 - - - - - 0.762 - - si:dkey-154b15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-52]
43. myt1la ENSDARG00000008209 120 1.557 - - - - - - - 0.836 0.721 myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
44. nrg2b ENSDARG00000086585 100 1.555 - - - - - 0.793 0.762 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
45. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.554 - - - - - 0.803 0.751 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
46. rbfox3 rbfox3 1443 1.552 - - - - - 0.778 0.774 - -
47. chm ENSDARG00000003845 498 1.55 - 0.752 - - - 0.798 - - - choroideremia (Rab escort protein 1) [Source:ZFIN;Acc:ZDB-GENE-030318-2]
48. MPPED1 ENSDARG00000088181 117 1.549 - - - 0.789 - - - 0.760 - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
49. sf3b3 ENSDARG00000103553 57 1.548 - - - - - 0.786 0.762 - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
50. rab39b rab39b 449 1.547 - - - - - 0.738 0.809 - -
51. SAMD14 145 1.546 - - - - - 0.766 0.780 - - sterile alpha motif domain containing 14, transcript variant X3
52. dbx2 2971 1.546 - - - - - 0.809 0.737 - - developing brain homeobox 2
53. RLTPR 1158 1.546 - - - - - - 0.842 - 0.704 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
54. mir124-6 64 1.53 - - - - - - 0.762 0.768 - microRNA 124-6
55. scrn2 ENSDARG00000043497 204 1.529 - - - 0.725 - - 0.804 - - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
56. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.527 - - - - - 0.765 0.762 - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
57. GRIN3A ENSDARG00000075802 27 1.525 - - - - - 0.781 0.744 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
58. lbx1a ENSDARG00000018321 634 1.522 - - - - - 0.813 0.709 - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
59. CRIP2 ENSDARG00000070670 323 1.522 - - - - - 0.817 - 0.705 - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
60. ppp2r2c ppp2r2c 441 1.521 - - - - - 0.780 0.741 - -
61. pax6a ENSDARG00000103379 3061 1.518 - - - - - 0.743 0.775 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
62. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 1.516 - - - 0.747 - - 0.769 - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
63. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.516 - - - - - 0.766 0.750 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
64. vamp2 ENSDARG00000056877 2158 1.514 - - - - - 0.790 - - 0.724 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
65. EPB41L1 EPB41L1 1896 1.51 - - - - - 0.761 0.749 - -
66. pou3f2a ENSDARG00000070220 817 1.509 - - - - - - - 0.789 0.720 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
67. dpysl5a ENSDARG00000011141 1827 1.509 - - - - - - 0.757 - 0.752 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
68. adam11 ENSDARG00000079204 298 1.508 - - - - - 0.786 0.722 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
69. tbc1d2b ENSDARG00000061986 247 1.508 - 0.721 - 0.787 - - - - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
70. IGLON5 ENSDARG00000022176 1353 1.506 - - - - - 0.757 0.749 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
71. zgc:112977 ENSDARG00000071741 109 1.505 - 0.778 - - - - - 0.727 - zgc:112977 [Source:ZFIN;Acc:ZDB-GENE-050327-98]
72. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.504 - - - - - 0.748 - 0.756 - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
73. slc8a2b ENSDARG00000100592 598 1.503 - - - - - 0.760 0.743 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
74. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 1.5 - 0.762 - 0.738 - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
75. pcdh18a ENSDARG00000089805 1096 1.499 - - - - - 0.736 0.763 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
76. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.498 - - - - - 0.710 0.788 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
77. pou3f3a ENSDARG00000042032 2835 1.495 - - - - - 0.727 0.768 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
78. kcnd1 ENSDARG00000074746 153 1.495 - - - - - 0.725 0.770 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
79. srek1 ENSDARG00000009764, ENSDARG00000114600 319 1.495 - 0.742 - - - 0.753 - - - splicing regulatory glutamine/lysine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-132]
80. tuba1c ENSDARG00000055216 8384 1.493 - - - - - - 0.734 - 0.759 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
81. gng3 ENSDARG00000009553 2530 1.49 - - - - - 0.787 0.703 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
82. pgap1 ENSDARG00000062465 30 1.49 - 0.728 - - - - 0.762 - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
83. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.489 - - - - - - 0.733 0.756 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
84. nell2b ENSDARG00000062797 854 1.484 - - - - - 0.747 0.737 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
85. C5H4orf22 C5H4orf22 117 1.48 0.726 - - 0.754 - - - - -
86. erbb4a ENSDARG00000063207 55 1.479 - - - - - 0.717 0.762 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
87. FGFBP3 FGFBP3 993 1.473 - - - - - 0.710 0.763 - -
88. LMTK3 LMTK3 222 1.473 - - - - - 0.730 0.743 - -
89. lhx5 ENSDARG00000057936 785 1.472 - - - - - - 0.726 0.746 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
90. rac3a ENSDARG00000090062 394 1.472 - - - - - 0.730 0.742 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
91. PIAS1 PIAS1 13 1.472 - 0.710 - - - - 0.762 - -
92. ERCC6L2 ENSDARG00000012403 236 1.471 - 0.769 - 0.702 - - - - - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
93. marcksa ENSDARG00000004049 2518 1.471 - - - - - 0.731 - - 0.740 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
94. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 1.47 - - - 0.765 - 0.705 - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
95. nbeaa ENSDARG00000070080 862 1.468 - - - - - - 0.721 - 0.747 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
96. tmeff1b ENSDARG00000056740 11253 1.466 - - - - - 0.748 0.718 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
97. fsd1 ENSDARG00000062017 207 1.466 - - - - - 0.735 0.731 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
98. sypb ENSDARG00000002230 262 1.466 - - - - - 0.716 0.750 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
99. TMEM151A ENSDARG00000077986 78 1.465 - - - - - 0.701 0.764 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
100. fez1 ENSDARG00000023174 701 1.461 - - - - - - 0.751 - 0.710 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]

There are 1491 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA