Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for grhl3

Gene Name Gene ID Reads Annotation
grhl3 ENSDARG00000078552 897 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]










Genes with expression patterns similar to grhl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. grhl3 ENSDARG00000078552 897 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
2. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 2.51 - - - 0.725 - - 0.845 - 0.940 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
3. trpm4 trpm4 501 2.436 - 0.741 - - - - 0.707 0.988 -
4. timp2b ENSDARG00000075261 867 2.376 - - - - - 0.797 0.716 - 0.863 TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]
5. rac2 ENSDARG00000038010 5837 2.328 - - - - - - 0.741 0.822 0.765 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
6. ralgps2 ENSDARG00000026519 1610 2.307 - - - - - 0.777 0.714 - 0.816 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
7. ZBTB11 ENSDARG00000017886 817 1.901 - - - - - - 0.916 0.985 - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
8. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.895 - - - - - - - 0.966 0.929 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
9. FUZ ENSDARG00000079730 821 1.885 - - - - - - 0.954 - 0.931 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
10. mov10a ENSDARG00000015829 566 1.874 - 0.946 - - - - - - 0.928 Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
11. mmp2 ENSDARG00000017676 2347 1.865 - - - - - - - 0.963 0.902 matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
12. smox ENSDARG00000036967 3816 1.853 - - - - - - - 0.965 0.888 spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
13. atrip ENSDARG00000063076 385 1.848 - - - - - - 0.930 - 0.918 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
14. si:ch73-91k6.2 ENSDARG00000091598 727 1.842 - - - - - - 0.935 - 0.907 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
15. soul3 ENSDARG00000102257 939 1.822 - 0.923 - - - - 0.899 - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
16. TPMT TPMT 138 1.81 - - - - - - 0.876 - 0.934
17. SLC38A9 ENSDARG00000032769 35 1.805 - 0.864 - - - - 0.941 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
18. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 1.802 - 0.848 - - - - 0.954 - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
19. CR388047.3 ENSDARG00000117023 89 1.8 - 0.858 - - - - - - 0.942
20. casp2 ENSDARG00000062052 559 1.794 - 0.857 - - - - - - 0.937 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
21. AKAP2 AKAP2 4178 1.79 - - - - - - - 0.972 0.818
22. ezrb ENSDARG00000025091 2861 1.782 - - - - - - 0.822 0.960 - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
23. si:ch211-89o5.1 si:ch211-89o5.1 91 1.775 - 0.830 - - - - - - 0.945
24. timm23 timm23 2712 1.772 - 0.929 - - - - - - 0.843
25. galnt12 ENSDARG00000055490 1653 1.772 - - - - - - 0.789 0.983 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
26. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.771 - 0.960 - - - - 0.811 - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
27. imp4 ENSDARG00000054540 1396 1.771 - - - - - - 0.852 - 0.919 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
28. si:rp71-3c13.3 si:rp71-3c13.3 128 1.763 - - - - - 0.827 0.936 - -
29. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.753 - - - - - - 0.902 - 0.851 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
30. AIFM2 ENSDARG00000077549 1419 1.751 - 0.870 - - - - 0.881 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
31. srp68 ENSDARG00000020820 1719 1.745 - - - - - - - 0.900 0.845 signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
32. gltpd1 gltpd1 377 1.744 - 0.808 - - - - 0.936 - -
33. BX569781.3 BX569781.3 576 1.729 - - - - - - 0.799 - 0.930
34. piezo1 ENSDARG00000076870 4704 1.721 - - - - - - - 0.891 0.830 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
35. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.72 - - - - - - - 0.978 0.742 OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
36. gk5 ENSDARG00000062864 738 1.719 - - - - - - 0.815 - 0.904 glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
37. bambib ENSDARG00000099677 4267 1.716 - - - - - 0.746 - 0.970 - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
38. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.713 - - - - - - 0.727 0.986 - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
39. cmasb 499 1.709 - 0.840 - - - - 0.869 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
40. ppp2r1b ppp2r1b 3469 1.709 - - - - - - - 0.966 0.743
41. arl2bp ENSDARG00000025383, ENSDARG00000114401 576 1.707 - - 0.735 - - - - 0.972 - ADP-ribosylation factor-like 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1604]
42. rcor1 ENSDARG00000031434 2733 1.704 - - - - - - 0.820 0.884 - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
43. thbs4b ENSDARG00000020072 2500 1.697 - - - - - - - 0.945 0.752 thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
44. RPRD1A ENSDARG00000104861 2560 1.693 - - - - - - 0.713 0.980 - regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
45. nfu1 ENSDARG00000068125 1743 1.692 - 0.756 - - - - - - 0.936 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
46. kremen1 ENSDARG00000062579 190 1.689 - 0.773 - - - - 0.916 - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
47. fam83b ENSDARG00000078309 318 1.687 - - - - - 0.778 0.909 - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
48. atp11c ENSDARG00000036442, ENSDARG00000116165 336 1.686 - 0.837 - - - - 0.849 - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
49. si:ch211-215d8.2 ENSDARG00000093233 784 1.684 - 0.877 - - - - 0.807 - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
50. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.68 - 0.880 - - - - 0.800 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
51. aebp1 ENSDARG00000091726 906 1.679 - - - - - - 0.767 - 0.912 AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
52. tmem8a ENSDARG00000032795 677 1.678 - 0.773 - - - - 0.905 - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
53. chordc1 chordc1 548 1.678 - 0.945 - - - 0.733 - - -
54. s100u ENSDARG00000071014 4754 1.674 - - - - - - 0.712 0.962 - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
55. lonp1 ENSDARG00000102765 507 1.673 - 0.802 - - - - 0.871 - - lon peptidase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4006]
56. stxbp3 ENSDARG00000008142 2604 1.673 - - - 0.742 - - - - 0.931 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
57. FAM83H FAM83H 190 1.672 - - - - - 0.731 - - 0.941
58. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.667 - - - - - - 0.731 - 0.936 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
59. cnstb ENSDARG00000042759 105 1.664 - - - - - 0.731 0.933 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
60. bag1 ENSDARG00000020895 1660 1.661 - 0.815 - - - - 0.846 - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
61. zgc:136474 zgc:136474 658 1.651 - 0.796 - 0.855 - - - - -
62. prmt10 prmt10 312 1.651 - - - - - - 0.713 - 0.938
63. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 1.647 - - - - - 0.738 0.909 - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
64. gpx7 ENSDARG00000091511 3045 1.645 - - - - - - 0.747 0.898 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
65. gsk3aa ENSDARG00000029501 957 1.641 - - - - - 0.713 0.928 - - glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
66. IKZF2 ENSDARG00000069111 1366 1.64 - - - - - - 0.773 - 0.867 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
67. HOOK3 ENSDARG00000114329 1980 1.639 - 0.830 - - - - - - 0.809 hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
68. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.637 - - - 0.726 - - 0.911 - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
69. si:ch211-174j14.2 ENSDARG00000093015 111 1.634 - - - 0.710 - - 0.924 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
70. CABZ01092303.1 CABZ01092303.1 8825 1.634 - - - - - - - 0.831 0.803
71. dennd2da ENSDARG00000058666 1780 1.634 - 0.838 - - - - 0.796 - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
72. yaf2 ENSDARG00000015966 1905 1.629 - 0.821 - - - - 0.808 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
73. tmem168a ENSDARG00000068705 498 1.629 - - - - - 0.737 0.892 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
74. Mar-02 Mar-02 1812 1.628 - - - - - - 0.709 - 0.919
75. TM2D2 ENSDARG00000035515 561 1.623 - 0.857 - - - - 0.766 - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
76. cx44.2 ENSDARG00000034207, ENSDARG00000113651 431 1.616 - - - - - 0.732 0.884 - - connexin 44.2 [Source:ZFIN;Acc:ZDB-GENE-010619-1]
77. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.613 - - - - - - 0.778 - 0.835 phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
78. C21H5orf15 C21H5orf15 2318 1.609 - - - - - - 0.898 - 0.711
79. lsr ENSDARG00000099291 881 1.606 - 0.722 - - - - - - 0.884 lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
80. rangap1a ENSDARG00000041317 1456 1.603 - 0.781 - - - - - - 0.822 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
81. pelo ENSDARG00000055477 1927 1.597 - - - 0.702 - - - - 0.895 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
82. prpf6 ENSDARG00000091367 1868 1.593 - - - - - - 0.737 - 0.856 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
83. GEMIN7 ENSDARG00000041011 529 1.589 - 0.762 - - - - 0.827 - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
84. casp3b ENSDARG00000055045 54 1.586 - 0.850 - - - 0.736 - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
85. eppk1 ENSDARG00000096359 4315 1.586 - 0.829 - - - - 0.757 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
86. HDAC5 ENSDARG00000075139 1287 1.583 - 0.705 - - - - 0.878 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
87. IER2 IER2 604 1.57 - - - 0.845 - - 0.725 - -
88. stk11 ENSDARG00000046074 506 1.568 - 0.822 - - - 0.746 - - - serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
89. pdxdc1 ENSDARG00000101886 1958 1.56 - - - - - - 0.792 - 0.768 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
90. man1b1 man1b1 3294 1.557 - 0.792 - - - - - - 0.765
91. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.555 - 0.841 - - - - 0.714 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
92. EPT1 EPT1 1912 1.555 - - - - - - 0.731 - 0.824
93. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 1.553 - 0.776 - - - 0.777 - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
94. zgc:91985 zgc:91985 1517 1.549 - - - - - 0.789 0.760 - -
95. prkcsh ENSDARG00000004470 1424 1.549 - - - - - 0.750 - - 0.799 protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
96. dnph1 ENSDARG00000075730 403 1.543 - - - 0.710 - - 0.833 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
97. sult6b1 ENSDARG00000086826 2070 1.539 - - - - - - 0.722 - 0.817 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
98. sall4 ENSDARG00000044485 1694 1.537 - - - - - - 0.745 - 0.792 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
99. DAPK2 DAPK2 283 1.533 - - - - - 0.771 0.762 - -
100. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 1.53 0.708 0.822 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]

There are 1772 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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