Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gphnb

Gene Name Gene ID Reads Annotation
gphnb ENSDARG00000100851 118 gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]










Genes with expression patterns similar to gphnb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gphnb ENSDARG00000100851 118 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
2. nell2b ENSDARG00000062797 854 3.365 0.731 0.950 - - - 0.743 0.941 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
3. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 2.844 - 1.000 - - - 0.859 0.985 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
4. KCNIP4 ENSDARG00000088100 86 2.799 0.901 1.000 - - - - 0.898 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
5. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 2.794 - 1.000 - - - 0.868 0.926 - -
6. ogfrl1 ENSDARG00000061223 64 2.727 0.926 - - - 0.963 0.838 - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
7. slc12a5b ENSDARG00000078187 329 2.719 - 1.000 - - 0.806 - 0.913 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
8. Mar-09 Mar-09 126 2.702 - 1.000 - - 0.870 - 0.832 - -
9. bsk146 ENSDARG00000099069 274 2.702 0.765 1.000 - - - - 0.937 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
10. GADD45G GADD45G 382 2.667 - 1.000 - - - 0.834 0.833 - -
11. MPP3_1 MPP3_1 88 2.646 - - - - 0.911 0.814 0.921 - -
12. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 2.627 - 1.000 - - - 0.847 0.780 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
13. fbxo41 ENSDARG00000078908 95 2.61 0.741 1.000 - - - - 0.869 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
14. TENM2 ENSDARG00000037122 48 2.576 - 1.000 - - - 0.868 0.708 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
15. DNER ENSDARG00000061031 123 2.55 0.901 - - - - 0.836 0.813 - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
16. nrcam nrcam 397 2.521 - 1.000 - - 0.768 - 0.753 - -
17. syngr3a ENSDARG00000014871 405 2.474 - - - - 0.788 0.749 0.937 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
18. fstl5 ENSDARG00000040198 213 2.469 - 1.000 - - - 0.705 0.764 - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
19. scn1lab ENSDARG00000062744 155 2.463 0.887 0.731 - - - - 0.845 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
20. SLC35F4 ENSDARG00000103124 55 2.456 0.790 - - - - 0.903 0.763 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
21. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.45 0.731 - - - - 0.773 0.946 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
22. tor3a ENSDARG00000079308 142 2.437 - 0.813 - - 0.904 - 0.720 - - torsin family 3, member A [Source:ZFIN;Acc:ZDB-GENE-081104-165]
23. lrrc4.1 ENSDARG00000069402 323 2.436 0.853 0.704 - - - - 0.879 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
24. syt12 ENSDARG00000101776 215 2.436 0.751 0.713 - - - - 0.972 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
25. fam43b ENSDARG00000070222 92 2.399 0.763 - - - - 0.780 0.856 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
26. zgc:100906 ENSDARG00000033599 344 2.399 0.843 - - - - 0.723 0.833 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
27. sv2bb ENSDARG00000060711 196 2.395 - - - - 0.746 0.711 0.938 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
28. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.393 0.826 - - - - 0.788 0.779 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
29. gdf11 ENSDARG00000044924 534 2.381 - 0.713 - - 0.838 - 0.830 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
30. CABZ01028287.1 CABZ01028287.1 626 2.359 0.792 - - - - 0.816 0.751 - -
31. dbx1a ENSDARG00000086393 3161 2.356 0.742 - - - - 0.768 0.846 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
32. cers6 ENSDARG00000053583 247 2.355 - 0.754 - 0.708 - - 0.893 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
33. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.314 0.721 - - - - 0.741 0.852 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
34. ric8a ENSDARG00000007247 229 2.29 0.759 - - - 0.755 - 0.776 - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
35. cntnap5b ENSDARG00000075189 16 2.259 - 0.713 - - - 0.838 0.708 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
36. PPFIA3 ENSDARG00000077053 310 1.957 - 1.000 - - - - 0.957 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
37. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.937 - 1.000 - - - - 0.937 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
38. nefla ENSDARG00000057568 62 1.923 - - - - - 0.949 0.974 - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
39. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.923 - 1.000 - - - - 0.923 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
40. CABZ01065506.1 CABZ01065506.1 204 1.912 - 1.000 - - - - 0.912 - -
41. EPM2AIP1 EPM2AIP1 4 1.901 0.901 1.000 - - - - - - -
42. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.886 - 1.000 - - - 0.886 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
43. syt9a ENSDARG00000003994 298 1.884 - 1.000 - - - - 0.884 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
44. si:ch211-237c9.3 si:ch211-237c9.3 17 1.883 - 1.000 - - - - 0.883 - -
45. gria2b ENSDARG00000052765 188 1.882 - 0.950 - - - - 0.932 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
46. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.868 - 0.921 - - - - 0.947 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
47. akt3a_1 ENSDARG00000104810 12 1.868 - 1.000 - - - 0.868 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
48. si:ch211-232k18.2 si:ch211-232k18.2 2 1.868 - 1.000 - - - 0.868 - - -
49. mstnb ENSDARG00000069133 3 1.868 - 1.000 - - - 0.868 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
50. gdf10a ENSDARG00000095378 12 1.839 - 1.000 - - - 0.839 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
51. nitr3a_1 ENSDARG00000110676 44 1.838 0.838 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
52. gpr22 gpr22 115 1.837 - 1.000 - - - - 0.837 - -
53. map6 map6 70 1.835 0.931 - - - - - 0.904 - -
54. si:rp71-1f1.4 ENSDARG00000092476 11 1.832 - 1.000 - - - 0.832 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
55. si:ch73-91k6.8 si:ch73-91k6.8 37 1.831 0.831 1.000 - - - - - - -
56. sall3b ENSDARG00000057586 982 1.823 - 0.920 - - - - 0.903 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
57. SGSM1 SGSM1 254 1.821 - 1.000 - - - - 0.821 - -
58. lrrc4.2 ENSDARG00000003020 235 1.818 - 0.908 - - 0.910 - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
59. pax6b ENSDARG00000045936 349 1.815 - - - - - 0.904 0.911 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
60. ASAP1 ASAP1 47 1.81 - - - - 0.942 0.868 - - -
61. cadpsb ENSDARG00000070567 458 1.807 - 0.896 - - - - 0.911 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
62. GRM8_1 GRM8_1 85 1.805 - - - - - 0.820 0.985 - -
63. PARP6 PARP6 119 1.803 - 1.000 - - - 0.803 - - -
64. sox19b ENSDARG00000040266 532 1.8 - - - - - 0.866 0.934 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
65. prph ENSDARG00000028306 242 1.8 0.910 - - - - - 0.890 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
66. cacng8b ENSDARG00000070626 176 1.794 0.898 - - - - - 0.896 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
67. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.794 - 0.900 - - 0.894 - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
68. btbd3b ENSDARG00000087517 107 1.793 - 1.000 - - - - 0.793 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
69. ntrk2a ENSDARG00000059897 185 1.789 - - - - - 0.815 0.974 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
70. mir124-2 196 1.787 - - - - - 0.854 0.933 - - microRNA 124-2
71. zgc:158254 ENSDARG00000071233 265 1.786 0.922 - - - 0.864 - - - - zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
72. CABZ01038313.1 CABZ01038313.1 79 1.777 - 1.000 - - - - 0.777 - -
73. CU694368.1 CU694368.1 56 1.775 0.838 - - - 0.937 - - - -
74. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.771 - - - - - 0.830 0.941 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
75. efr3ba ENSDARG00000033516 19 1.769 0.901 - - - - 0.868 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
76. KCNAB3 KCNAB3 134 1.765 - - - 0.856 - - 0.909 - -
77. si:dkey-156m18.1 si:dkey-156m18.1 13 1.764 - 0.896 - - - 0.868 - - -
78. mfsd4a mfsd4a 179 1.758 - - - 0.890 - 0.868 - - -
79. evlb ENSDARG00000099720 245 1.758 - 1.000 - - - - 0.758 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
80. gabrr2a ENSDARG00000052982 21 1.755 0.901 - - 0.854 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
81. LRFN5_1 LRFN5_1 96 1.753 0.950 - - - - - 0.803 - -
82. dpysl5a ENSDARG00000011141 1827 1.753 - 0.797 - - - - 0.956 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
83. nmnat2 ENSDARG00000004580 370 1.752 - 0.948 - - - - 0.804 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
84. si:ch211-39a7.1 ENSDARG00000037427 31 1.751 - - - - - 0.868 0.883 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
85. KCNA2 KCNA2 66 1.748 - 1.000 - - - - 0.748 - -
86. CR407704.1 CR407704.1 188 1.748 - - - - - 0.940 0.808 - -
87. fam5ca fam5ca 76 1.746 - - - - 0.918 0.828 - - -
88. KCNJ6 ENSDARG00000058985 71 1.746 - 1.000 - - - - 0.746 - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
89. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1.743 - 1.000 - - - - 0.743 - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
90. nupl2 ENSDARG00000029043 105 1.743 - - - - - 0.868 0.875 - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
91. DKK3 DKK3 12 1.74 0.872 - - - - 0.868 - - -
92. CABZ01029738.1 CABZ01029738.1 327 1.739 0.836 - - - - - 0.903 - -
93. fam219ab ENSDARG00000013813 591 1.736 - - - - - 0.813 0.923 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
94. PEX5L PEX5L 179 1.735 - 0.795 - - - - 0.940 - -
95. si:dkey-238f9.1 ENSDARG00000079446 51 1.735 - - - - - 0.852 0.883 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
96. BSN_1 BSN_1 21 1.732 0.901 - - - - - 0.831 - -
97. WNK2 ENSDARG00000104989 429 1.731 0.900 - - - - - 0.831 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
98. phactr3a ENSDARG00000058243 150 1.728 - - - - - 0.739 0.989 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
99. BX000430.1 ENSDARG00000112057 135 1.726 - 1.000 - - - 0.726 - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
100. cdk5r2b ENSDARG00000078671 20 1.724 - - - - - 0.868 0.856 - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]

There are 2201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA