Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gpc4

Gene Name Gene ID Reads Annotation
gpc4 ENSDARG00000015472 2529 glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]










Genes with expression patterns similar to gpc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gpc4 ENSDARG00000015472 2529 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
2. CU019646.2 CU019646.2 519 1.971 - 1.000 - - - - 0.971 - -
3. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 1.966 - 0.995 - - - - 0.971 - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
4. akr1b1 ENSDARG00000006215 2511 1.948 - 0.999 - - - - 0.949 - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
5. skp1 ENSDARG00000003151 8172 1.911 - 0.988 - - - - 0.923 - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
6. eif3s10 ENSDARG00000076815 10822 1.818 - 0.858 - - - - 0.960 - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
7. dlst ENSDARG00000014230, ENSDARG00000113407 6282 1.786 - 0.973 - - - - 0.813 - - dihydrolipoamide S-succinyltransferase [Source:ZFIN;Acc:ZDB-GENE-030326-1]
8. WDR1 ENSDARG00000114022 7532 1.783 - 0.907 - - - - 0.876 - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
9. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.757 - - - - - 0.793 0.964 - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
10. C2H6orf52 C2H6orf52 2847 1.747 - - - - - 0.769 0.978 - -
11. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.743 - - - - - 0.765 0.978 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
12. SCARF2 1117 1.724 - 0.999 - - - 0.725 - - - scavenger receptor class F, member 2
13. hiat1a ENSDARG00000013117 607 1.709 - - - - - 0.734 0.975 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
14. ptp4a3 ENSDARG00000039997 1964 1.695 - - - - - 0.735 0.960 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
15. bc2 5213 1.674 - - - - - 0.738 0.936 - - putative breast adenocarcinoma marker
16. rpa1 ENSDARG00000003938 4403 1.656 - 0.865 - - - - 0.791 - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
17. pleca ENSDARG00000062590 16794 1.63 - 0.928 - - - - 0.702 - - plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
18. tmem63ba ENSDARG00000104559 11859 1.625 - 0.870 - - - - 0.755 - - transmembrane protein 63Ba [Source:ZFIN;Acc:ZDB-GENE-030131-4320]
19. actn1 ENSDARG00000007219 2919 1.621 - - - - - 0.750 0.871 - - actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
20. ccnb1 ENSDARG00000051923 3226 1.583 - - - - - 0.773 0.810 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
21. efna1a ENSDARG00000030326 1692 1.577 - - - - - 0.834 - 0.743 - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
22. EIF4G1 EIF4G1 19676 1.517 - 0.763 - - - - 0.754 - -
23. dbnla ENSDARG00000008170 2129 1.505 - - - - - 0.706 0.799 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
24. klf2a ENSDARG00000042667, ENSDARG00000113441 588 1.465 - - - - - 0.743 - 0.722 - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
25. mcl1a ENSDARG00000009779 2058 1.455 - - - - - 0.734 - - 0.721 MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
26. C4H12orf45 C4H12orf45 483 1 - 1.000 - - - - - - -
27. mboat7 ENSDARG00000033436 848 1 - 1.000 - - - - - - - membrane bound O-acyltransferase domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1516]
28. cdk16_1 ENSDARG00000032072 2031 1 - 1.000 - - - - - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
29. pard6b ENSDARG00000003865 990 1 - 1.000 - - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
30. frem1a ENSDARG00000069473 1847 1 - 1.000 - - - - - - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
31. CR352249.1 ENSDARG00000114701 857 1 - 1.000 - - - - - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
32. TSPY2 TSPY2 1371 1 - 1.000 - - - - - - -
33. uba5 ENSDARG00000063588 1260 1 - 1.000 - - - - - - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
34. gprc5c ENSDARG00000100862 457 1 - 1.000 - - - - - - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
35. malt1a malt1a 903 1 - 1.000 - - - - - - -
36. zic2a ENSDARG00000015554 2860 1 - 1.000 - - - - - - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
37. taf5 ENSDARG00000018325 1363 1 - 1.000 - - - - - - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
38. mettl16 ENSDARG00000055838 818 1 - 1.000 - - - - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
39. tbl1x ENSDARG00000060438 1386 1 - 1.000 - - - - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
40. PLEKHG1 2100 1 - 1.000 - - - - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
41. wdr75 ENSDARG00000040730 1247 0.999 - 0.999 - - - - - - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
42. gpatch1 ENSDARG00000033418 1349 0.999 - 0.999 - - - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
43. C1H7orf55 C1H7orf55 2552 0.999 - 0.999 - - - - - - -
44. wasf3 wasf3 3287 0.999 - 0.999 - - - - - - -
45. vash2 ENSDARG00000007774 2537 0.999 - 0.999 - - - - - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
46. ZDHHC5 ZDHHC5 836 0.999 - 0.999 - - - - - - -
47. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.999 - 0.999 - - - - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
48. slc38a5a ENSDARG00000009901 2527 0.999 - 0.999 - - - - - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
49. and3 ENSDARG00000056873 22650 0.999 - 0.999 - - - - - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
50. sipa1l2 ENSDARG00000061640 4545 0.999 - 0.999 - - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
51. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 0.999 - 0.999 - - - - - - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
52. CR847934.1 CR847934.1 2658 0.999 - 0.999 - - - - - - -
53. agla ENSDARG00000103811 2856 0.999 - 0.999 - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
54. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.999 - 0.999 - - - - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
55. PRODH_1 PRODH_1 3400 0.999 - 0.999 - - - - - - -
56. dnajc18 ENSDARG00000056005 8084 0.999 - 0.999 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
57. atraid ENSDARG00000043388 648 0.999 - 0.999 - - - - - - - all-trans retinoic acid-induced differentiation factor [Source:ZFIN;Acc:ZDB-GENE-040724-177]
58. PEAK1 ENSDARG00000079756 1330 0.999 - 0.999 - - - - - - - pseudopodium-enriched atypical kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100422-1]
59. wu:fc47e11 539 0.999 - 0.999 - - - - - - - wu:fc47e11
60. cxxc5a ENSDARG00000078865 3447 0.999 - 0.999 - - - - - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
61. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 0.998 - 0.998 - - - - - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
62. polr2d ENSDARG00000076509 3386 0.998 - 0.998 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
63. nxn ENSDARG00000033978, ENSDARG00000115888 1683 0.998 - 0.998 - - - - - - - nucleoredoxin [Source:ZFIN;Acc:ZDB-GENE-050522-75]
64. ccne2 ENSDARG00000098529 4695 0.998 - 0.998 - - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
65. lima1 lima1 4760 0.998 - 0.998 - - - - - - -
66. smo ENSDARG00000002952 6411 0.998 - 0.998 - - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
67. ENSDARG00000092971 ENSDARG00000092971 563 0.998 - 0.998 - - - - - - -
68. ezra ENSDARG00000020944 3105 0.997 - 0.997 - - - - - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
69. ACVR1B ACVR1B 4824 0.997 - 0.997 - - - - - - -
70. rrp1 ENSDARG00000103337 2366 0.997 - 0.997 - - - - - - - ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]
71. dnajb12b ENSDARG00000087473 3811 0.997 - 0.997 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
72. acsl3b ENSDARG00000014674 3748 0.996 - 0.996 - - - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
73. arfgef2 ENSDARG00000074702 1593 0.996 - 0.996 - - - - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
74. dnajc5aa ENSDARG00000042948 2885 0.995 - 0.995 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
75. and1 ENSDARG00000088514 37603 0.995 - 0.995 - - - - - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
76. arhgap1 ENSDARG00000024324 6904 0.994 - 0.994 - - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
77. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.994 - 0.994 - - - - - - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
78. anxa11b ENSDARG00000002632 5132 0.993 - 0.993 - - - - - - - annexin A11b [Source:ZFIN;Acc:ZDB-GENE-030707-5]
79. ebna1bp2 ENSDARG00000054980 4621 0.993 - 0.993 - - - - - - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
80. trappc1 ENSDARG00000039005 6990 0.993 - 0.993 - - - - - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
81. snrnp27 ENSDARG00000035625 9080 0.992 - 0.992 - - - - - - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
82. jph2 ENSDARG00000028625 6706 0.992 - 0.992 - - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
83. lonrf1l ENSDARG00000078567 1049 0.992 - 0.992 - - - - - - - LON peptidase N-terminal domain and ring finger 1, like [Source:ZFIN;Acc:ZDB-GENE-081104-397]
84. hoxb8a ENSDARG00000056027 6340 0.991 - 0.991 - - - - - - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
85. txnrd1 11401 0.991 - 0.991 - - - - - - - thioredoxin reductase 1
86. klf6a ENSDARG00000029072 3758 0.989 - - - - - - 0.989 - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
87. ndufa9 ndufa9 8846 0.986 - 0.986 - - - - - - -
88. csnk1db ENSDARG00000006125 2581 0.986 - - - - - - 0.986 - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
89. srsf2a ENSDARG00000057484 25721 0.985 - 0.985 - - - - - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
90. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 0.985 - - - - - - 0.985 - - integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
91. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 0.984 - - - - - - 0.984 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
92. KDM6B KDM6B 10265 0.984 - 0.984 - - - - - - -
93. strap ENSDARG00000007405 6426 0.984 - - - - - - 0.984 - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
94. nhsl1b ENSDARG00000042627 3697 0.982 - - - - - - 0.982 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
95. selt2 12741 0.982 - 0.982 - - - - - - - selenoprotein T, 2
96. rtn2a ENSDARG00000016088 12184 0.982 - 0.982 - - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
97. nup98 ENSDARG00000074955 3998 0.981 - - - - - - 0.981 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
98. CHST5 CHST5 1293 0.981 - - - - - - 0.981 - -
99. pcyt2 ENSDARG00000043003 3506 0.981 - - - - - - 0.981 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
100. si:ch211-13c6.2 ENSDARG00000027738 1521 0.98 - - - - - - 0.980 - - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]

There are 819 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA