Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gmcl1

Gene Name Gene ID Reads Annotation
gmcl1 ENSDARG00000020948 261 germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]










Genes with expression patterns similar to gmcl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gmcl1 ENSDARG00000020948 261 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
2. itprip ENSDARG00000015576 62 1.83 - - - 0.968 - - 0.862 - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
3. pum2 ENSDARG00000061040 207 1.754 0.810 - - 0.944 - - - - - pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
4. parp6a ENSDARG00000042703 112 1.722 - 0.784 - 0.938 - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
5. si:dkey-17e16.17 615 1.708 - 0.805 - 0.903 - - - - - si:dkey-17e16.17
6. ctssa ctssa 24 1.67 0.788 - - - - - 0.882 - -
7. vipr1b ENSDARG00000059058 62 1.662 - 0.935 - - - - 0.727 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
8. efnb3a ENSDARG00000112993 399 1.653 - - - 0.895 - - 0.758 - - ephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]
9. srd5a1 ENSDARG00000020509 242 1.63 - - - 0.922 - - 0.708 - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
10. txndc11 ENSDARG00000101291 589 1.628 - 0.799 - 0.829 - - - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
11. fam46a fam46a 92 1.604 0.812 - - - - 0.792 - - -
12. C9H2orf76 C9H2orf76 559 1.596 - - - 0.883 - - 0.713 - -
13. ILKAP ENSDARG00000040615 817 1.59 - - - 0.865 - - 0.725 - - integrin-linked kinase-associated serine/threonine phosphatase [Source:ZFIN;Acc:ZDB-GENE-070410-122]
14. si:ch1073-185p12.2 ENSDARG00000100199 7 1.571 0.730 - - - - - 0.841 - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
15. zgc:112083 ENSDARG00000037405 306 1.569 - 0.726 - 0.843 - - - - - zgc:112083 [Source:ZFIN;Acc:ZDB-GENE-050417-284]
16. trmu ENSDARG00000043734 291 1.561 - 0.804 - - - - 0.757 - - tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-540]
17. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1.551 - - - 0.809 - - 0.742 - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
18. zgc:174708 zgc:174708 11 1.541 0.788 0.753 - - - - - - -
19. TMEM150A TMEM150A 975 1.534 0.715 - - 0.819 - - - - -
20. ppan ENSDARG00000022232 983 1.529 - - - 0.724 - - 0.805 - - peter pan homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030114-4]
21. nr1d4b ENSDARG00000059370 243 1.521 - 0.729 - - - - 0.792 - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
22. psmf1 ENSDARG00000022652 527 1.518 - 0.814 - - - - 0.704 - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
23. C6H1orf74 C6H1orf74 53 1.505 - 0.751 - - - - 0.754 - -
24. si:ch211-134c9.2 ENSDARG00000095593 86 1.504 - 0.753 - - - - 0.751 - - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
25. si:ch73-389k6.1 ENSDARG00000103186 296 1.492 - 0.769 - 0.723 - - - - - si:ch73-389k6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-408]
26. arap3 ENSDARG00000076801 725 1.485 0.731 - - 0.754 - - - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
27. bmp8a ENSDARG00000035677 40 1.485 - 0.712 - - - - 0.773 - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
28. zgc:194469 ENSDARG00000104367 93 1.484 - 0.709 - - - 0.775 - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
29. mych ENSDARG00000077473 911 1.478 - 0.763 - 0.715 - - - - - myelocytomatosis oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030219-51]
30. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.478 - 0.770 - - 0.708 - - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
31. wbp2 ENSDARG00000056605 101 1.462 - 0.703 - - - 0.759 - - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
32. mfng ENSDARG00000042925 104 1.452 0.730 - - - - 0.722 - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
33. efna3b ENSDARG00000098295 319 1.418 - 0.708 - - - - 0.710 - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
34. si:dkey-93l1.9 13 0.977 - - - 0.977 - - - - - si:dkey-93l1.9
35. ubox5 ENSDARG00000058563 161 0.977 - - - 0.977 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
36. NAPB_1 NAPB_1 33 0.976 - - - 0.976 - - - - -
37. pcdh1gb9 ENSDARG00000088475 71 0.975 - - - 0.975 - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
38. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.972 - - - 0.972 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
39. C24H16orf11 C24H16orf11 32 0.972 - - - 0.972 - - - - -
40. trpa1b ENSDARG00000031875 39 0.972 - - - 0.972 - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
41. grm2a ENSDARG00000004150 64 0.971 - - - 0.971 - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
42. tmem187 ENSDARG00000051989 136 0.971 - - - 0.971 - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
43. BX324003.4 BX324003.4 24 0.97 - - - 0.970 - - - - -
44. olfm1a ENSDARG00000018270 107 0.968 - - - 0.968 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
45. NRSN2 NRSN2 57 0.968 - - - 0.968 - - - - -
46. zgc:111991 zgc:111991 159 0.966 - - - 0.966 - - - - -
47. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 0.965 - - - 0.965 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
48. lrrcc1 ENSDARG00000078535 118 0.964 - - - 0.964 - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
49. dnah9l ENSDARG00000062630 268 0.962 - - - 0.962 - - - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
50. nos1apb ENSDARG00000058701 148 0.961 - - - 0.961 - - - - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
51. ARX ARX 71 0.96 - - - 0.960 - - - - -
52. map3k3 ENSDARG00000060348 1482 0.96 - - - 0.960 - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
53. phyh ENSDARG00000086740 88 0.96 - - - 0.960 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
54. klc3 ENSDARG00000055965 116 0.959 - - - 0.959 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
55. xkr8.2 ENSDARG00000076820 51 0.959 - - - 0.959 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
56. minal minal 383 0.957 - - - 0.957 - - - - -
57. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 0.956 - - - 0.956 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
58. fam43b ENSDARG00000070222 92 0.955 - - - 0.955 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
59. tmem222b ENSDARG00000104097 132 0.955 - - - 0.955 - - - - - transmembrane protein 222b [Source:ZFIN;Acc:ZDB-GENE-090303-4]
60. psme3 ENSDARG00000012234, ENSDARG00000111284 113 0.953 - - - 0.953 - - - - - proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]
61. si:dkey-261e22.5 si:dkey-261e22.5 68 0.953 - - - 0.953 - - - - -
62. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 0.949 - - - 0.949 - - - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
63. ftsjd1 ftsjd1 137 0.947 - - - 0.947 - - - - -
64. SPA17 ENSDARG00000069361 141 0.947 - - - 0.947 - - - - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
65. C12H17orf62_1 C12H17orf62_1 83 0.945 - - - 0.945 - - - - -
66. VSTM2B VSTM2B 149 0.944 - - - 0.944 - - - - -
67. si:dkey-192g7.3 ENSDARG00000094012 105 0.943 - - - 0.943 - - - - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
68. zgc:162780 ENSDARG00000069548 340 0.943 - - - 0.943 - - - - - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
69. rft1 ENSDARG00000060398 146 0.941 - - - 0.941 - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
70. klhl22 ENSDARG00000088807 324 0.941 - - - 0.941 - - - - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
71. TKT TKT 298 0.941 - - - 0.941 - - - - -
72. fam110b ENSDARG00000088073 420 0.94 - - - 0.940 - - - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
73. usp46 ENSDARG00000045343 65 0.94 - - - - - - 0.940 - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
74. RSPH10B ENSDARG00000051891, ENSDARG00000115907 4 0.94 - - - - - - 0.940 - - radial spoke head 10 homolog B [Source:ZFIN;Acc:ZDB-GENE-060929-300]
75. tnfaip3 ENSDARG00000027777 1066 0.94 - - - 0.940 - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
76. GPR64 GPR64 58 0.94 - - - - - - 0.940 - -
77. FAM183B FAM183B 25 0.94 - - - - - - 0.940 - -
78. ids ENSDARG00000071699 265 0.937 - - - 0.937 - - - - - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
79. adhfe1 ENSDARG00000053518 499 0.936 - - - 0.936 - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
80. hsp70l_1 ENSDARG00000055723 72 0.933 - - - 0.933 - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
81. zgc:173726 ENSDARG00000077078 250 0.931 - - - 0.931 - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
82. ptpn5 ENSDARG00000074866 548 0.931 - - - 0.931 - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
83. C7H11orf68 C7H11orf68 446 0.931 - - - 0.931 - - - - -
84. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.929 - - - 0.929 - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
85. si:ch211-193k19.2 ENSDARG00000077572 35 0.929 - - - 0.929 - - - - - si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]
86. vgf ENSDARG00000105529 247 0.929 - - - 0.929 - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
87. myo6b ENSDARG00000042141 349 0.928 - - - 0.928 - - - - - myosin VIb [Source:ZFIN;Acc:ZDB-GENE-030318-3]
88. rhbdd2 ENSDARG00000092463 937 0.922 - - - 0.922 - - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
89. zbtb8os ENSDARG00000016368 284 0.922 - - - 0.922 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
90. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 0.921 - - - 0.921 - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
91. atxn7l2b ENSDARG00000056268 226 0.92 - - - 0.920 - - - - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
92. CT573468.1 CT573468.1 283 0.919 - - - 0.919 - - - - -
93. ddx20 ENSDARG00000061204 477 0.918 - - - 0.918 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-030131-202]
94. C8H9orf172 C8H9orf172 113 0.918 - - - 0.918 - - - - -
95. SLC27A3 SLC27A3 240 0.917 - - - 0.917 - - - - -
96. si:ch211-139k8.2 143 0.916 - - - 0.916 - - - - - si:ch211-139k8.2, transcript variant X4
97. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 0.916 - - - 0.916 - - - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
98. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.914 - 0.914 - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
99. lypd6 ENSDARG00000004307 233 0.914 - - - 0.914 - - - - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
100. MAPK8IP1_1 MAPK8IP1_1 186 0.912 - - - 0.912 - - - - -

There are 945 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA