Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for glra1

Gene Name Gene ID Reads Annotation
glra1 ENSDARG00000012019 315 glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]










Genes with expression patterns similar to glra1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. glra1 ENSDARG00000012019 315 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
2. nkx1.2lb ENSDARG00000099427 220 3.28 0.799 - - - 0.915 0.824 0.742 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
3. eno2 ENSDARG00000014287 2162 2.723 - - - - 0.842 0.904 0.977 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
4. scg2b ENSDARG00000038574 345 2.649 - - - - 0.878 0.935 0.836 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
5. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.6 - - - - 0.778 0.953 0.869 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
6. gng2_1 ENSDARG00000056831 113 2.56 0.873 - - - - 0.866 0.821 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
7. lrrn3 lrrn3 137 2.497 - - - - 0.780 0.780 0.937 - -
8. grm4 ENSDARG00000040156 342 2.482 0.768 - - - - 0.913 0.801 - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
9. trim2b ENSDARG00000076174 250 2.481 - - - - 0.775 0.909 0.797 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
10. layna ENSDARG00000035169 515 2.447 - - - - 0.744 0.801 0.902 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
11. tmem91 ENSDARG00000068456 81 2.402 0.724 - - - - 0.950 0.728 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
12. CABZ01051991.1 CABZ01051991.1 346 2.394 0.709 - - - - 0.741 0.944 - -
13. si:ch211-163b2.4 ENSDARG00000094890 140 2.386 0.873 - - - 0.708 0.805 - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
14. ADAM22 ENSDARG00000060532 2259 1.921 - - - - - 0.956 0.965 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
15. hmp19 2554 1.911 - - - - - 0.946 0.965 - - HMP19 protein
16. sox2 ENSDARG00000070913 2763 1.909 - - - - - 0.938 0.971 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
17. si:ch73-21g5.7 ENSDARG00000093156 9412 1.908 - - - - - 0.947 0.961 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
18. plp1a ENSDARG00000103732 3544 1.907 - - - - - 0.940 0.967 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
19. stmn1b ENSDARG00000033655 9491 1.896 - - - - - 0.945 0.951 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
20. st6gal1 ENSDARG00000044514 142 1.896 - - - - - 0.944 0.952 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
21. mapk12b ENSDARG00000006409 2246 1.893 - - - - - 0.928 0.965 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
22. pcsk1nl ENSDARG00000076170 1232 1.883 - - - - - 0.953 0.930 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
23. syt11a ENSDARG00000057913 1145 1.881 - - - - - 0.931 0.950 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
24. her15.2 her15.2 1701 1.88 - - - - - 0.926 0.954 - -
25. cnrip1a ENSDARG00000091683 1491 1.877 - - - - - 0.920 0.957 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
26. spock2 ENSDARG00000075393 791 1.876 - - - - - 0.924 0.952 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
27. st18 663 1.872 - - - - - 0.919 0.953 - - suppression of tumorigenicity 18, zinc finger
28. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.872 - - - - - 0.966 0.906 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
29. CU856359.2 CU856359.2 182 1.869 - - - - - 0.914 0.955 - -
30. dnajc6 ENSDARG00000079891 438 1.868 - - - - - 0.940 0.928 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
31. atp2b3b ENSDARG00000023445 1424 1.868 - - - - - 0.915 0.953 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
32. cacng8a ENSDARG00000020450 32 1.866 - - - - - 0.913 0.953 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
33. nrn1a ENSDARG00000071860 1311 1.861 - - - - - 0.890 0.971 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
34. st8sia2 ENSDARG00000018788 2183 1.861 - - - - - 0.914 0.947 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
35. atp1b4 ENSDARG00000053262 1337 1.859 - - - - - 0.933 0.926 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
36. slc17a6b ENSDARG00000041150 823 1.858 - - - - - 0.962 0.896 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
37. DTX4 ENSDARG00000076302 2642 1.856 - - - - - 0.900 0.956 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
38. adarb1a ENSDARG00000041609 476 1.854 - - - - - 0.951 0.903 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
39. pcdh1gc5 ENSDARG00000104826 10052 1.853 - - - - - 0.899 0.954 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
40. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.851 - - - - - 0.906 0.945 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
41. slc6a1b ENSDARG00000039647 1301 1.85 - - - - - 0.926 0.924 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
42. bsk146 ENSDARG00000099069 274 1.848 - - - - - 0.928 0.920 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
43. rap2ip rap2ip 681 1.845 - - - - - 0.892 0.953 - -
44. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.845 - - - - - 0.885 0.960 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
45. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.843 - - - - - 0.912 0.931 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
46. nptx1l ENSDARG00000074671 569 1.84 - - - - - 0.897 0.943 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
47. atpv0e2 ENSDARG00000059057 585 1.837 - - - - - 0.891 0.946 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
48. PPFIA3 ENSDARG00000077053 310 1.835 - - - - - 0.871 0.964 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
49. ROBO3_1 ROBO3_1 468 1.833 - - - - - 0.940 0.893 - -
50. PROCA1 ENSDARG00000069823 343 1.831 - - - - - 0.900 0.931 - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
51. ptbp2b ENSDARG00000015901 2458 1.831 - - - - - 0.935 0.896 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
52. st8sia5 ENSDARG00000036584 529 1.828 - - - - - 0.923 0.905 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
53. gria2b ENSDARG00000052765 188 1.828 0.873 - - - - - 0.955 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
54. dpysl5a ENSDARG00000011141 1827 1.827 - - - - - 0.910 0.917 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
55. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.826 - - - - - 0.887 0.939 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
56. sez6l2 ENSDARG00000076052 360 1.826 - - - - - 0.915 0.911 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
57. notch1b ENSDARG00000052094 7874 1.824 - - - - - 0.910 0.914 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
58. atp6v0cb ENSDARG00000036577 3472 1.824 - - - - - 0.869 0.955 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
59. syn2a ENSDARG00000045945 434 1.822 - - - - - 0.926 0.896 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
60. ek1 ENSDARG00000020080 742 1.822 - - - - - 0.906 0.916 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
61. ksr2 ENSDARG00000094526 134 1.819 - - - - - 0.910 0.909 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
62. dpysl4 ENSDARG00000103490 534 1.817 - - - - - 0.885 0.932 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
63. nrarpb ENSDARG00000018958 6225 1.816 - - - - - 0.848 0.968 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
64. ppp3ca ENSDARG00000004988 615 1.816 - - - - - 0.961 0.855 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
65. C7H4orf48 C7H4orf48 1455 1.815 - - - - - 0.886 0.929 - -
66. KCNIP4 ENSDARG00000088100 86 1.815 - - - - - 0.881 0.934 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
67. stmn2a ENSDARG00000033234 2272 1.815 - - - - - 0.941 0.874 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
68. stxbp1a ENSDARG00000001994 5154 1.814 - - - - - 0.898 0.916 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
69. slc1a3a ENSDARG00000104431 9888 1.81 - - - - - 0.866 0.944 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
70. shisa7 shisa7 181 1.81 - - - - - 0.943 0.867 - -
71. C19H7orf41 C19H7orf41 2243 1.81 - - - - - 0.958 0.852 - -
72. mir10d-1 mir10d-1 860 1.809 - - - - - 0.919 0.890 - -
73. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.809 - - - - - 0.884 0.925 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
74. rtn1b ENSDARG00000021143 1682 1.809 - - - - - 0.890 0.919 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
75. xkr6 xkr6 286 1.808 0.873 - - - - 0.935 - - -
76. tnika ENSDARG00000056218 728 1.806 - - - - - 0.906 0.900 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
77. scn1lab ENSDARG00000062744 155 1.805 - - - - - 0.911 0.894 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
78. kcnj11l ENSDARG00000031438 369 1.804 - - - - - 0.905 0.899 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
79. NLRP1 NLRP1 54 1.804 0.873 - - - 0.931 - - - -
80. CYTH2 ENSDARG00000028800 2349 1.803 - - - - - 0.901 0.902 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
81. ncana 1537 1.803 - - - - - 0.879 0.924 - - neurocan a
82. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.801 - - - - - 0.904 0.897 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
83. CLIP3 ENSDARG00000054456 734 1.8 - - - - - 0.922 0.878 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
84. TTBK1_1 TTBK1_1 132 1.798 - - - - - 0.917 0.881 - -
85. BX957337.1 BX957337.1 1685 1.798 - - - - - 0.920 0.878 - -
86. necap1 ENSDARG00000020798 612 1.797 - - - - - 0.841 0.956 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
87. atcaya ENSDARG00000071678 344 1.797 - - - - - 0.978 0.819 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
88. nexmifb ENSDARG00000029296 416 1.794 - - - - - 0.974 0.820 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
89. MAP6 MAP6 643 1.794 - - - - - 0.866 0.928 - -
90. CACFD1 ENSDARG00000090818 1298 1.792 - - - - - 0.910 0.882 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
91. dacha ENSDARG00000010132 648 1.791 - - - - - 0.823 0.968 - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
92. gabra5 ENSDARG00000070730 156 1.791 - - - - - 0.837 0.954 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
93. TUBA1A ENSDARG00000001889 25294 1.788 - - - - - 0.823 0.965 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
94. pkib ENSDARG00000053110 527 1.787 - - - - - 0.944 0.843 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
95. zic1 ENSDARG00000015567 2520 1.786 - - - - - 0.897 0.889 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
96. gap43 ENSDARG00000099744 4114 1.786 - - - - - 0.867 0.919 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
97. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.785 - - - - - 0.872 0.913 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
98. si:dkey-191g9.5 ENSDARG00000056080 60 1.784 0.873 - - - 0.911 - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
99. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.783 - - - - - 0.845 0.938 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
100. mex3b ENSDARG00000058369 1867 1.783 - - - - - 0.874 0.909 - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]

There are 2330 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA