Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gli1

Gene Name Gene ID Reads Annotation
gli1 ENSDARG00000101244 534 GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]










Genes with expression patterns similar to gli1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gli1 ENSDARG00000101244 534 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
2. srrm2 ENSDARG00000037965 1967 1.839 - - - - - 0.856 0.983 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
3. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.789 - 0.795 - - - - 0.994 - -
4. AMDHD1 ENSDARG00000007366 89 1.776 - - - - - 0.783 0.993 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
5. cbx2 ENSDARG00000044938 1576 1.754 - - - - - 0.785 0.969 - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
6. sult3st1 ENSDARG00000009885 218 1.736 - - - - - 0.743 0.993 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
7. nelfa ENSDARG00000061411, ENSDARG00000116904 581 1.732 - - - 0.740 - - 0.992 - - negative elongation factor complex member A [Source:ZFIN;Acc:ZDB-GENE-030131-6400]
8. mapta ENSDARG00000089314 2038 1.726 0.749 - - - - - 0.977 - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
9. uhrf1 ENSDARG00000103409 3282 1.716 - - - - - 0.733 0.983 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
10. mfn1b ENSDARG00000079219 1699 1.708 - 0.766 - - - - 0.942 - - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
11. timm23 timm23 2712 1.699 0.712 - - - - - 0.987 - -
12. atf6 ENSDARG00000012656 3873 1.693 - - - - - 0.755 0.938 - - activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
13. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.681 - - - - - 0.732 0.949 - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
14. rpl7a ENSDARG00000019230 1204 1.681 - 0.704 - - - - 0.977 - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
15. si:dkey-235d18.5 ENSDARG00000039652 667 1.638 - - - - 0.704 - 0.934 - - si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
16. JMJD1C JMJD1C 289 1.552 - 0.735 - - - 0.817 - - -
17. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 1.519 - - - 0.702 - 0.817 - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
18. PACS1 PACS1 2061 1.517 - 0.739 - - - 0.778 - - -
19. enkur ENSDARG00000031248 427 1.494 - 0.701 - - 0.793 - - - - enkurin, TRPC channel interacting protein [Source:ZFIN;Acc:ZDB-GENE-070718-1]
20. dync2i1 dync2i1 83 1.475 - - - 0.725 - 0.750 - - -
21. HERC4 ENSDARG00000059936 369 1.466 0.730 0.736 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
22. dph7 ENSDARG00000062083 248 1.444 0.742 0.702 - - - - - - - diphthamide biosynthesis 7 [Source:ZFIN;Acc:ZDB-GENE-070410-57]
23. igfbp3 ENSDARG00000099144 269 0.997 - - - - - - 0.997 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
24. gbas gbas 735 0.997 - - - - - - 0.997 - -
25. CAPN5 CAPN5 357 0.997 - - - - - - 0.997 - -
26. FBXO31 ENSDARG00000062195 753 0.997 - - - - - - 0.997 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
27. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.997 - - - - - - 0.997 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
28. plxna4 ENSDARG00000019328 782 0.996 - - - - - - 0.996 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
29. unk ENSDARG00000000935 353 0.996 - - - - - - 0.996 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
30. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.996 - - - - - - 0.996 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
31. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.996 - - - - - - 0.996 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
32. dhodh ENSDARG00000051889 401 0.996 - - - - - - 0.996 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
33. papolg ENSDARG00000012141 1445 0.996 - - - - - - 0.996 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
34. prdm5 ENSDARG00000006288 472 0.996 - - - - - - 0.996 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
35. agk ENSDARG00000009837, ENSDARG00000113514 811 0.995 - - - - - - 0.995 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
36. zgc:173962 zgc:173962 67 0.995 - - - - - - 0.995 - -
37. PRR5 PRR5 630 0.995 - - - - - - 0.995 - -
38. acn9 acn9 520 0.995 - - - - - - 0.995 - -
39. prim1 ENSDARG00000040163 909 0.995 - - - - - - 0.995 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
40. zgc:153372 ENSDARG00000068967 358 0.995 - - - - - - 0.995 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
41. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.995 - - - - - - 0.995 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
42. BX324179.3 BX324179.3 326 0.995 - - - - - - 0.995 - -
43. CABZ01068263.1 CABZ01068263.1 712 0.995 - - - - - - 0.995 - -
44. PSD PSD 367 0.995 - - - - - - 0.995 - -
45. lppr4a lppr4a 141 0.995 - - - - - - 0.995 - -
46. zgc:63691 zgc:63691 180 0.995 - - - - - - 0.995 - -
47. VPS37C ENSDARG00000031836 906 0.995 - - - - - - 0.995 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
48. PLXNB2 PLXNB2 99 0.995 - - - - - - 0.995 - -
49. asb3 ENSDARG00000005246 317 0.995 - - - - - - 0.995 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
50. mob2b ENSDARG00000012005 395 0.995 - - - - - - 0.995 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
51. asb6 ENSDARG00000007125 389 0.995 - - - - - - 0.995 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
52. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.995 - - - - - - 0.995 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
53. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.995 - - - - - - 0.995 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
54. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.995 - - - - - - 0.995 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
55. socs3a ENSDARG00000025428 349 0.995 - - - - - - 0.995 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
56. si:ch73-108h4.3 si:ch73-108h4.3 193 0.995 - - - - - - 0.995 - -
57. baz2a ENSDARG00000102974 266 0.995 - - - - - - 0.995 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
58. ICT1 356 0.995 - - - - - - 0.995 - - immature colon carcinoma transcript 1
59. dnajb9a ENSDARG00000052072 578 0.995 - - - - - - 0.995 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
60. plekhh1 ENSDARG00000053835 2123 0.995 - - - - - - 0.995 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
61. PTS ENSDARG00000045269 2185 0.994 - - - - - - 0.994 - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
62. zgc:162612 ENSDARG00000079699 244 0.994 - - - - - - 0.994 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
63. TMEM184B TMEM184B 1280 0.994 - - - - - - 0.994 - -
64. PRKD3 ENSDARG00000079967 192 0.994 - - - - - - 0.994 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
65. ZNF337_10 ZNF337_10 183 0.994 - - - - - - 0.994 - -
66. mrps7 ENSDARG00000101622 889 0.994 - - - - - - 0.994 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
67. si:ch211-51o18.2 si:ch211-51o18.2 111 0.994 - - - - - - 0.994 - -
68. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.994 - - - - - - 0.994 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
69. lzic ENSDARG00000055899 638 0.994 - - - - - - 0.994 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
70. illr4 ENSDARG00000008075 164 0.994 - - - - - - 0.994 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
71. tmem203 ENSDARG00000104996 1182 0.994 - - - - - - 0.994 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
72. ERRFI1 ERRFI1 664 0.994 - - - - - - 0.994 - -
73. PDZD8 ENSDARG00000088699 844 0.994 - - - - - - 0.994 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
74. timm10b ENSDARG00000043898 1233 0.994 - - - - - - 0.994 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
75. cul1b ENSDARG00000007691 719 0.994 - - - - - - 0.994 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
76. cndp2 ENSDARG00000003931 1177 0.994 - - - - - - 0.994 - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
77. bin2b ENSDARG00000010255 2649 0.994 - - - - - - 0.994 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
78. SLITRK6 ENSDARG00000098769 217 0.994 - - - - - - 0.994 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
79. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.994 - - - - - - 0.994 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
80. AL844567.1 AL844567.1 1605 0.994 - - - - - - 0.994 - -
81. cux1b ENSDARG00000043134 641 0.993 - - - - - - 0.993 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
82. nhp2l1a nhp2l1a 993 0.993 - - - - - - 0.993 - -
83. znf687a ENSDARG00000102774 393 0.993 - - - - - - 0.993 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
84. zdhhc3 zdhhc3 152 0.993 - - - - - - 0.993 - -
85. armc1l ENSDARG00000020887 1219 0.993 - - - - - - 0.993 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
86. kbtbd7 ENSDARG00000078001 367 0.993 - - - - - - 0.993 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
87. zc3h18 ENSDARG00000062506 1676 0.993 - - - - - - 0.993 - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
88. irf8 ENSDARG00000056407 85 0.992 - - - - - - 0.992 - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
89. dhdds ENSDARG00000039851 1135 0.992 - - - - - - 0.992 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
90. esyt3 ENSDARG00000006422 335 0.992 - - - - - - 0.992 - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
91. mmab ENSDARG00000068344 526 0.992 - - - - - - 0.992 - - methylmalonic aciduria (cobalamin deficiency) cblB type [Source:ZFIN;Acc:ZDB-GENE-060526-232]
92. tmco3 ENSDARG00000075108 368 0.992 - - - - - - 0.992 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
93. cpsf1 ENSDARG00000034178 2036 0.992 - - - - - - 0.992 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
94. sigmar1 ENSDARG00000011418 1240 0.992 - - - - - - 0.992 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
95. smc5 ENSDARG00000044282 779 0.992 - - - - - - 0.992 - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
96. rac3b ENSDARG00000020795 1523 0.992 - - - - - - 0.992 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
97. CABZ01078889.1 CABZ01078889.1 911 0.992 - - - - - - 0.992 - -
98. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 0.992 - - - - - - 0.992 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
99. zgc:136763 zgc:136763 190 0.992 - - - - - - 0.992 - -
100. fbxo30a ENSDARG00000058561 867 0.991 - - - - - - 0.991 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]

There are 1151 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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