Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gins3

Gene Name Gene ID Reads Annotation
gins3 ENSDARG00000038847 667 GINS complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040721-1]










Genes with expression patterns similar to gins3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gins3 ENSDARG00000038847 667 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GINS complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040721-1]
2. CCDC132 CCDC132 267 1.699 0.864 0.835 - - - - - - -
3. sfrp5 ENSDARG00000039041 1777 1.614 0.815 0.799 - - - - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
4. TNFRSF14 TNFRSF14 330 1.611 0.852 0.759 - - - - - - -
5. lmbrd1 ENSDARG00000104223 924 1.605 0.904 - - - - 0.701 - - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
6. CCHCR1 CCHCR1 238 1.604 0.889 - - - - - 0.715 - -
7. tmem168a ENSDARG00000068705 498 1.593 0.802 0.791 - - - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
8. rab25a ENSDARG00000058800 451 1.591 0.835 - - - - 0.756 - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
9. sec22c ENSDARG00000063387 203 1.59 - 0.862 - - - - 0.728 - - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
10. bmp7a ENSDARG00000018260 92 1.581 0.838 0.743 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
11. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.573 0.732 0.841 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
12. CR925758.1 CR925758.1 83 1.556 0.765 0.791 - - - - - - -
13. ctbp2 ctbp2 3255 1.549 - 0.845 - - - 0.704 - - -
14. wipf2b ENSDARG00000006712 375 1.536 - 0.811 - 0.725 - - - - - WAS/WASL interacting protein family, member 2b [Source:ZFIN;Acc:ZDB-GENE-040625-182]
15. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.534 - 0.808 - - - - 0.726 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
16. MEPCE ENSDARG00000059461 374 1.529 - - - - - 0.725 0.804 - - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
17. polr1c ENSDARG00000039400 606 1.513 - 0.800 - - - - - 0.713 - RNA polymerase I and III subunit C [Source:ZFIN;Acc:ZDB-GENE-040426-1495]
18. gabpb2a ENSDARG00000007943 1570 1.509 - 0.768 - - - 0.741 - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
19. ablim1a ENSDARG00000060149 228 1.505 - - - - - - 0.784 - 0.721 actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
20. sphk2 ENSDARG00000069893 1518 1.504 0.721 0.783 - - - - - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
21. htatsf1 ENSDARG00000056649 2018 1.502 0.767 - - - - 0.735 - - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
22. sept5b ENSDARG00000036031 188 1.499 - - - - - 0.730 0.769 - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
23. NUDT8 ENSDARG00000007722 329 1.485 0.750 - - - - 0.735 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
24. TCAIM ENSDARG00000079881 424 1.482 - - - - - 0.768 0.714 - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
25. setdb1b ENSDARG00000099021 2937 1.482 - - - 0.715 - - - 0.767 - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
26. katnbl1 ENSDARG00000042522 1086 1.474 - 0.757 - - - - - - 0.717 katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
27. med13a ENSDARG00000053884, ENSDARG00000112778 931 1.471 - 0.706 - - - - - 0.765 - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
28. chrnb2b ENSDARG00000017790 155 1.471 - - - - - 0.727 0.744 - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
29. mlx ENSDARG00000037891 433 1.469 0.734 - - - - - 0.735 - - MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]
30. AL929252.1 AL929252.1 81 1.461 - - - - - 0.733 0.728 - -
31. sox2 ENSDARG00000070913 2763 1.458 - - - 0.753 - 0.705 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
32. polb ENSDARG00000003749 2049 1.456 - - - - - - 0.750 - 0.706 polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
33. zgc:63568 ENSDARG00000087262 76 1.454 0.702 - - - - - 0.752 - - zgc:63568 [Source:ZFIN;Acc:ZDB-GENE-040426-1165]
34. palm1b ENSDARG00000007818 2128 1.446 - 0.736 - - - 0.710 - - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
35. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.44 - - - - - 0.703 0.737 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
36. ksr2 ENSDARG00000094526 134 1.405 - - - - - 0.702 0.703 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
37. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 0.909 - 0.909 - - - - - - - zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
38. zgc:66472 ENSDARG00000075916 635 0.903 - 0.903 - - - - - - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
39. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.902 - 0.902 - - - - - - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
40. arpc5b ENSDARG00000019062 2786 0.902 - 0.902 - - - - - - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
41. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 0.894 - 0.894 - - - - - - - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
42. mapk8ip3 ENSDARG00000062531 631 0.884 - 0.884 - - - - - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-090303-6]
43. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 0.884 - 0.884 - - - - - - - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
44. SPATS2 SPATS2 1124 0.883 - 0.883 - - - - - - -
45. cops4 ENSDARG00000043732 1508 0.882 - 0.882 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
46. CR762484.2 CR762484.2 42 0.88 0.880 - - - - - - - -
47. qsox1 ENSDARG00000039459 320 0.88 - 0.880 - - - - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
48. nudt15 ENSDARG00000113961 381 0.875 - 0.875 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
49. cited4b ENSDARG00000101009, ENSDARG00000114241 3632 0.872 - 0.872 - - - - - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b [Source:ZFIN;Acc:ZDB-GENE-030425-5]
50. DUSP18 DUSP18 117 0.871 0.871 - - - - - - - -
51. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.87 - - - - - 0.870 - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
52. srd5a3 ENSDARG00000043307 142 0.868 0.868 - - - - - - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
53. EFCC1 ENSDARG00000077826 1359 0.867 - 0.867 - - - - - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
54. vrk3 ENSDARG00000036056 424 0.867 - 0.867 - - - - - - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
55. si:dkey-9i23.6 ENSDARG00000094678 58 0.866 - 0.866 - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
56. TMEM116 TMEM116 96 0.865 0.865 - - - - - - - -
57. pot1 ENSDARG00000079915 42 0.865 0.865 - - - - - - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
58. btbd7 ENSDARG00000003069 609 0.864 - 0.864 - - - - - - - BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4477]
59. ttc33 ENSDARG00000035406, ENSDARG00000111770 82 0.864 0.864 - - - - - - - - tetratricopeptide repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040718-480]
60. calcoco1 calcoco1 1060 0.863 - 0.863 - - - - - - -
61. BX649494.1 BX649494.1 195 0.863 0.863 - - - - - - - -
62. uhrf1bp1l ENSDARG00000004055 419 0.861 - 0.861 - - - - - - - UHRF1 binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-041210-177]
63. si:ch211-222k6.3 ENSDARG00000071578 127 0.861 0.861 - - - - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
64. BX470149.1 BX470149.1 235 0.86 0.860 - - - - - - - -
65. gcfc2 ENSDARG00000079020 479 0.86 - - - - - - 0.860 - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
66. FAM98C FAM98C 225 0.859 - 0.859 - - - - - - -
67. si:ch211-220f16.2 ENSDARG00000007976 638 0.858 - - - - - 0.858 - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
68. wdr43 ENSDARG00000077264 1992 0.858 - - - - - 0.858 - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
69. TRIM14_7 TRIM14_7 381 0.857 - 0.857 - - - - - - -
70. fdx1l 461 0.857 - 0.857 - - - - - - - ferredoxin 1-like
71. scp2b ENSDARG00000102356 951 0.856 - 0.856 - - - - - - - sterol carrier protein 2b [Source:ZFIN;Acc:ZDB-GENE-041010-196]
72. SRR SRR 544 0.856 0.856 - - - - - - - -
73. acvr2aa ENSDARG00000011188 1454 0.855 - 0.855 - - - - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
74. rfwd2 740 0.854 - - - - - 0.854 - - - ring finger and WD repeat domain 2, transcript variant X1
75. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 0.854 - 0.854 - - - - - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
76. BX571712.1 ENSDARG00000097833 764 0.854 - 0.854 - - - - - - -
77. entpd2a.2 ENSDARG00000033953 389 0.853 - 0.853 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
78. atad1a ENSDARG00000023267 155 0.853 0.853 - - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
79. si:dkey-231k6.4 si:dkey-231k6.4 72 0.853 0.853 - - - - - - - -
80. thap11 ENSDARG00000036055 238 0.851 0.851 - - - - - - - - THAP domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2121]
81. exoc7 ENSDARG00000087229 987 0.851 0.851 - - - - - - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
82. AL954372.1 ENSDARG00000112499 589 0.851 - - - - - 0.851 - - -
83. mertk mertk 1232 0.851 - 0.851 - - - - - - -
84. FP236168.1 FP236168.1 150 0.851 - 0.851 - - - - - - -
85. fam132a fam132a 498 0.85 - 0.850 - - - - - - -
86. wdr54 ENSDARG00000010248 245 0.85 0.850 - - - - - - - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
87. srfbp1 ENSDARG00000075323 2262 0.85 - 0.850 - - - - - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
88. ENSDARG00000023499 ENSDARG00000023499 395 0.85 0.850 - - - - - - - -
89. smad6a ENSDARG00000053209, ENSDARG00000110519 779 0.85 0.850 - - - - - - - - SMAD family member 6a [Source:ZFIN;Acc:ZDB-GENE-011015-1]
90. fmnl2a ENSDARG00000012586 136 0.849 0.849 - - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
91. f5 ENSDARG00000055705 973 0.849 - 0.849 - - - - - - - coagulation factor V [Source:ZFIN;Acc:ZDB-GENE-030131-5531]
92. nupl1 nupl1 1100 0.848 - 0.848 - - - - - - -
93. rraga ENSDARG00000104149 515 0.847 - 0.847 - - - - - - - Ras-related GTP binding A [Source:ZFIN;Acc:ZDB-GENE-030131-4083]
94. xrcc5_1 ENSDARG00000099298 1533 0.847 - 0.847 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
95. CU928220.2 CU928220.2 537 0.846 - 0.846 - - - - - - -
96. FBXL3 FBXL3 1769 0.846 - 0.846 - - - - - - -
97. psmd3 ENSDARG00000018124 540 0.846 - 0.846 - - - - - - - proteasome 26S subunit, non-ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1444]
98. si:dkeyp-7b3.1 si:dkeyp-7b3.1 615 0.846 - 0.846 - - - - - - -
99. CU138503.3 CU138503.3 31 0.846 0.846 - - - - - - - -
100. abcb8 ENSDARG00000056672 589 0.846 - 0.846 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]

There are 1063 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA