Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-99a

Gene Name Gene ID Reads Annotation
gga-mir-99a ENSGALG00000018242 192 gga-mir-99a [Source:miRBase;Acc:MI0001173]











Genes with expression patterns similar to gga-mir-99a

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-99a ENSGALG00000018242 192 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-99a [Source:miRBase;Acc:MI0001173]
2. HDAC10 ENSGALG00000041251 57 1.824 - - - - - - 1.000 0.824 - - histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
3. ENSGALG00000005026 ENSGALG00000005026 9 1.729 - - - 0.729 - - - 1.000 - -
4. SCUBE1 ENSGALG00000014178 91 1.722 - - 0.755 - 0.967 - - - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
5. IRAK4 ENSGALG00000009586 289 1.571 - - - - - - - - 0.791 0.780 interleukin 1 receptor associated kinase 4 [Source:NCBI gene;Acc:417796]
6. PPP2R3C ENSGALG00000010052 637 1.472 - - - - 0.736 - - - 0.736 - protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
7. SPAG8 2 1 - - - - - - - 1.000 - - sperm associated antigen 8, transcript variant X3
8. UTS2 ENSGALG00000000556 0 1 - - - - - - - 1.000 - - urotensin 2 [Source:NCBI gene;Acc:404535]
9. THRB ENSGALG00000011294 7 1 - - - - 1.000 - - - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
10. TDRD12 ENSGALG00000004704 19 1 - - - - - - 1.000 - - - tudor domain containing 12, transcript variant X3
11. VSNL1 ENSGALG00000016464 19 1 - - - - - - - 1.000 - - visinin like 1 [Source:NCBI gene;Acc:396189]
12. TNNI3K ENSGALG00000011353 10 1 - - - - - - 1.000 - - - TNNI3 interacting kinase [Source:NCBI gene;Acc:100533999]
13. GSTT1 ENSGALG00000006344 22 1 - - - - - - - 1.000 - - glutathione S-transferase theta 1 [Source:NCBI gene;Acc:396322]
14. ENSGALG00000024369 ENSGALG00000024369 4 1 - - - - - - - 1.000 - -
15. NR4A3 ENSGALG00000013568 1 1 - - - - - - - 1.000 - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
16. ITM2B ENSGALG00000016996 1112 1 - - - - - - - 1.000 - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
17. ANKFY1 ENSGALG00000001467 21 1 - - - - - - - 1.000 - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
18. PODXL2 ENSGALG00000006009 4 1 - - - 1.000 - - - - - - podocalyxin like 2 [Source:HGNC Symbol;Acc:HGNC:17936]
19. TVB TVB 11 1 - - - - - - - 1.000 - -
20. ANKRD42 8 1 - - - - - - - 1.000 - - ankyrin repeat domain 42
21. ZNF385C ENSGALG00000003403 9 1 - - - 1.000 - - - - - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
22. PLCH2 ENSGALG00000001207 7 1 - - - - - - - 1.000 - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
23. SLC1A2 ENSGALG00000037556 22 1 - - - - - - - 1.000 - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
24. TESK2 ENSGALG00000010230 9 1 - - - - - - 1.000 - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
25. GRM5 ENSGALG00000017238 2 1 - - - 1.000 - - - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
26. HERPUD1 ENSGALG00000001220 18 1 - - - - - - - 1.000 - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
27. OTOG ENSGALG00000006208 17 1 - - - - - - 1.000 - - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
28. TM6SF2 ENSGALG00000029015 109 1 - - - - - - - 1.000 - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
29. SOS2 ENSGALG00000012273 41 1 - - - - - - - 1.000 - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
30. U2_1 U2_1 13 1 - - - - - - 1.000 - - -
31. IL22RA1 ENSGALG00000004221 71 1 - - - - 1.000 - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
32. DYDC1 ENSGALG00000002432 54 1 - - - - - - - 1.000 - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
33. PDE3A ENSGALG00000013143 28 1 - - - - - - 1.000 - - - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
34. AVD ENSGALG00000023622 22 1 - - - - - - 1.000 - - - avidin [Source:NCBI gene;Acc:396260]
35. CR1L ENSGALG00000023950 98 1 - - - - - - - 1.000 - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
36. ENSGALG00000019428 ENSGALG00000019428 1 1 - - - - - - 1.000 - - -
37. GTF2E1L ENSGALG00000013600 4 1 - - - - - - - 1.000 - - general transcription factor IIE subunit 1-like
38. MUSK ENSGALG00000015728 7 1 - - - - - - 1.000 - - - muscle associated receptor tyrosine kinase [Source:NCBI gene;Acc:373897]
39. REEP1 ENSGALG00000015786 7 1 - - - - - - - 1.000 - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
40. HHAT ENSGALG00000009881 7 1 - - - - - - - 1.000 - - hedgehog acyltransferase [Source:HGNC Symbol;Acc:HGNC:18270]
41. C8orf37 ENSGALG00000038971 5 1 - - - - - - - 1.000 - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
42. SLC44A1 ENSGALG00000015439 32 1 - - - - - - - 1.000 - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
43. MCAM ENSGALG00000030027 26 1 - - - - - - - 1.000 - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
44. OVCH2 ENSGALG00000005318 8 1 - - - - - - - 1.000 - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
45. TTLL7 ENSGALG00000008850 49 1 - - - - - - 1.000 - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
46. FAM166A ENSGALG00000045172 0 1 - - - - - - - 1.000 - - family with sequence similarity 166 member A [Source:HGNC Symbol;Acc:HGNC:33818]
47. GAL4 GAL4 2 1 - - - - - - - 1.000 - -
48. CACNA1I ENSGALG00000035051 27 1 - - - - - - 1.000 - - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
49. SVOPL ENSGALG00000012812 27 1 - - - - - - - 1.000 - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
50. MYRFL ENSGALG00000019352 2 1 - - - - - - - 1.000 - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
51. CCR5 ENSGALG00000037077 23 1 - - - - - - - 1.000 - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
52. gga-mir-1577 ENSGALG00000031349 1 1 - - - 1.000 - - - - - - gga-mir-1577 [Source:miRBase;Acc:MI0007303]
53. HMGCS2 ENSGALG00000002960 54 1 - - - - - - - 1.000 - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
54. GRIA4 ENSGALG00000038995 29 1 - - - - - - - 1.000 - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
55. PROZ ENSGALG00000016832 6 1 - - - - - - - 1.000 - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
56. MIS18A ENSGALG00000015884 25 1 - - - - - - - 1.000 - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
57. HPDL ENSGALG00000023348 1 1 - - - - - - - 1.000 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
58. HGD ENSGALG00000014966 6 1 - - - - - - 1.000 - - - homogentisate 1,2-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4892]
59. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - - 1.000 - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
60. LZTS2 ENSGALG00000023612 9 1 - - - - - - - 1.000 - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
61. HOPX ENSGALG00000011404 10 1 - - - - - - - 1.000 - - HOP homeobox [Source:NCBI gene;Acc:395241]
62. IL2RB ENSGALG00000012472 7 1 - - - - - - - 1.000 - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
63. SLC10A4 ENSGALG00000033908 300 1 - - - - - - - 1.000 - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
64. ZDHHC22 ENSGALG00000023099 10 1 - - - 1.000 - - - - - - zinc finger DHHC-type containing 22 [Source:HGNC Symbol;Acc:HGNC:20106]
65. ST3GAL2 ENSGALG00000002651 20 1 - - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
66. PRKAR2B ENSGALG00000008060 40 1 - - - - 1.000 - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
67. ATP2C2 ENSGALG00000035743 1 1 - - - - - - 1.000 - - - ATPase secretory pathway Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:29103]
68. TRIM14 ENSGALG00000015315 22 1 - - - - 1.000 - - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
69. CAMK2A ENSGALG00000005621 3 1 - - - - - - - 1.000 - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
70. PREX1 ENSGALG00000004621 48 1 - - - - - - - 1.000 - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:32594]
71. ZNF654 ENSGALG00000022866 14 1 - - - - - - 1.000 - - - zinc finger protein 654 [Source:HGNC Symbol;Acc:HGNC:25612]
72. ADCYAP1 ENSGALG00000014858 9 1 - - - 1.000 - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
73. SLC16A4 ENSGALG00000000417 168 1 - - - - - - 1.000 - - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
74. PLEKHG4 ENSGALG00000023898 65 1 - - - - - - 1.000 - - - pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
75. LRIG1 ENSGALG00000007483 19 1 - - - - - - 1.000 - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
76. ATP6V1H ENSGALG00000013621 13 1 - - - - - - - 1.000 - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
77. RANBP3L 19 1 - - - - - - 1.000 - - - RAN binding protein 3 like, transcript variant X2
78. PNLIP ENSGALG00000009231 2 1 - - - 1.000 - - - - - - pancreatic lipase [Source:NCBI gene;Acc:423916]
79. ENSGALG00000026578 ENSGALG00000026578 4 1 - - - - - - - 1.000 - -
80. ENSGALG00000008309 ENSGALG00000008309 7 1 - - - 1.000 - - - - - -
81. GNRH1 9 1 - - - - - - 1.000 - - - gonadotropin releasing hormone 1
82. SLCO1B1 ENSGALG00000019276 7 0.995 - - - - 0.995 - - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
83. PLCE1 ENSGALG00000039528 151 0.995 - - - - - - - 0.995 - - phospholipase C epsilon 1
84. ZNFX1 ENSGALG00000004859 33 0.995 - - - - 0.995 - - - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
85. ENSGALG00000027427 ENSGALG00000027427 16 0.985 - - - - 0.985 - - - - -
86. STK38 ENSGALG00000000523 44 0.981 - - - - - - - 0.981 - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
87. GPCPD1 ENSGALG00000009130 24 0.981 - - - - - - - 0.981 - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
88. DRG11 DRG11 32 0.981 - - - - - - - 0.981 - -
89. SASH1 ENSGALG00000012342 28 0.981 - - - - - - - 0.981 - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
90. SORL1 ENSGALG00000006598 39 0.981 - - - - - - - 0.981 - - sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
91. STRADB ENSGALG00000008373 10 0.981 - - - - - - - 0.981 - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
92. BAI3 BAI3 106 0.981 - - - - - - - 0.981 - -
93. CATHL1 ENSGALG00000027973 98 0.981 - - - - - - - 0.981 - - cathelicidin-1 [Source:NCBI gene;Acc:414337]
94. MALSU1 ENSGALG00000010954 51 0.977 - - - - 0.977 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
95. CEP170B ENSGALG00000011639 71 0.967 - - - - 0.967 - - - - - centrosomal protein 170B, transcript variant X13
96. ENSGALG00000005433 ENSGALG00000005433 55 0.962 - - - - 0.962 - - - - -
97. LRRC3B ENSGALG00000011314 26 0.957 - - - - - - - 0.957 - - leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
98. OGCHI OGCHI 3 0.956 - - - - - - 0.956 - - -
99. RAB37 ENSGALG00000027789 17 0.952 - - - - 0.952 - - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
100. SLC24A2 ENSGALG00000015080 54 0.952 - - - - 0.952 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]

There are 187 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA