Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-7474

Gene Name Gene ID Reads Annotation
gga-mir-7474 ENSGALG00000033766 5727 gga-mir-7474 [Source:miRBase;Acc:MI0024147]











Genes with expression patterns similar to gga-mir-7474

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-7474 ENSGALG00000033766 5727 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
2. ACTC1 ENSGALG00000009844 20914 6.149 0.940 - 0.887 0.926 0.894 - 0.875 - 0.771 0.856 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. XIRP1 ENSGALG00000006025 729 4.746 0.763 - 0.744 0.828 0.811 - 0.792 - 0.808 - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
4. NEXN ENSGALG00000008945 1504 4.667 0.719 - 0.869 0.797 - 0.794 - - 0.703 0.785 nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
5. ACTN2 ENSGALG00000014463 1724 4.166 0.895 - 0.856 - - 0.720 - - 0.840 0.855 actinin alpha 2 [Source:NCBI gene;Acc:396263]
6. TPM1 ENSGALG00000003521 11894 3.996 0.823 - 0.734 0.827 0.854 - - - - 0.758 tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
7. KLHL31 ENSGALG00000016309 1518 3.932 0.870 - 0.821 - 0.755 - 0.722 - 0.764 - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
8. TNNC2 ENSGALG00000006835 2963 3.924 - 0.701 0.795 0.788 0.833 - - - 0.807 - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
9. TNNI1 ENSGALG00000000313 4069 3.921 0.874 - 0.740 0.711 0.815 - - - 0.781 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
10. GGMOXR1 GGMOXR1 6734 3.899 - - 0.774 0.771 0.861 - 0.769 - 0.724 -
11. C1QTNF3 ENSGALG00000027887 8646 3.465 - - 0.892 0.934 0.861 - - - 0.778 - C1q and tumor necrosis factor related protein 3, transcript variant X1
12. TNNT3 ENSGALG00000006572 1652 3.454 - - 0.859 0.846 0.817 - - - - 0.932 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
13. RBM24 ENSGALG00000012712 4138 3.412 0.906 - 0.853 - 0.800 - - - - 0.853 RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
14. SH3BGR ENSGALG00000016127 2561 3.226 0.818 - 0.830 0.800 - - - - - 0.778 SH3 domain binding glutamate rich protein
15. MYL1 ENSGALG00000002907 1300 3.162 0.805 - 0.705 0.829 0.823 - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
16. ACTA1 ENSGALG00000011086 2543 3.12 0.830 - 0.759 0.765 0.766 - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
17. MYH15 ENSGALG00000015358 6304 3.044 0.857 - - 0.707 0.751 - - - 0.729 - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
18. BHMT ENSGALG00000004518 4700 3.037 - - 0.774 0.714 - - 0.721 - - 0.828 betaine--homocysteine S-methyltransferase
19. PKD2L2 ENSGALG00000006120 592 3.004 - - 0.742 0.779 0.777 - - - - 0.706 polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
20. LECT1 LECT1 12694 2.99 - - - 0.732 0.703 - 0.710 - - 0.845
21. MYL3 ENSGALG00000005448 3379 2.549 0.894 - 0.801 - - - - - 0.854 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
22. ENSGALG00000028654 ENSGALG00000028654 236 2.497 - - 0.863 0.793 - - - - 0.841 -
23. TRIM55 ENSGALG00000041327 1097 2.485 0.908 - 0.849 - 0.728 - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
24. HSPB8 ENSGALG00000007383 5333 2.474 - - 0.881 0.787 0.806 - - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
25. TITIN TITIN 589 2.43 0.720 - - 0.867 - - - - - 0.843
26. AHCY ENSGALG00000033677 35555 2.421 - - 0.786 0.820 - - - - - 0.815 adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
27. TMEM182 ENSGALG00000038936 274 2.389 - - 0.826 0.801 0.762 - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
28. EN1 ENSGALG00000042389 3051 2.377 - - - 0.773 0.841 - - - 0.763 - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
29. SPON1 ENSGALG00000038775 16503 2.371 - - 0.847 0.758 0.766 - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
30. PAX1 ENSGALG00000039040 3339 2.37 - - - 0.792 0.734 - - - - 0.844 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
31. SMOC1 ENSGALG00000009415 2403 2.338 - - 0.724 - - - - - 0.799 0.815 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
32. TCF15 ENSGALG00000026276 3646 2.31 - - 0.758 0.770 0.782 - - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
33. MEOX2 ENSGALG00000010794 1556 2.269 - - 0.750 0.755 0.764 - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
34. MYL2_1 ENSGALG00000004582 2367 2.208 - - 0.736 - 0.749 - - - 0.723 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
35. MYF6 ENSGALG00000010936 1143 2.207 - - 0.777 - 0.702 - - - 0.728 - myogenic factor 6 [Source:NCBI gene;Acc:417873]
36. TNNC1 ENSGALG00000001459 7110 1.701 0.920 - - - 0.781 - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
37. TNNT2 ENSGALG00000000302 568 1.658 0.845 - - 0.813 - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
38. MYOG ENSGALG00000000172 460 1.645 - - 0.884 - - - 0.761 - - - myogenin [Source:NCBI gene;Acc:374004]
39. CPZ ENSGALG00000030209 8822 1.639 - - - 0.872 - - 0.767 - - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
40. PPAPDC1A PPAPDC1A 2790 1.615 - - - 0.878 0.737 - - - - -
41. HSPB2 ENSGALG00000040842 197 1.588 0.850 - - - - - - - 0.738 - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
42. ACBD7 ENSGALG00000019663 2328 1.551 - - 0.795 - - - - - - 0.756 acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
43. NGFR ENSGALG00000035950 13452 1.543 - - 0.828 0.715 - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
44. MUSTN1 ENSGALG00000001709 713 1.54 - - 0.734 - - - - - 0.806 - musculoskeletal, embryonic nuclear protein 1 [Source:NCBI gene;Acc:404773]
45. SOX9 ENSGALG00000004386 14802 1.539 - - - 0.831 0.708 - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
46. PALMD ENSGALG00000005442 901 1.534 - - 0.816 - - - - - - 0.718 palmdelphin [Source:NCBI gene;Acc:424475]
47. MYOZ2 ENSGALG00000011991 714 1.534 0.819 - - - 0.715 - - - - - myozenin 2 [Source:NCBI gene;Acc:422682]
48. GFRA2 ENSGALG00000032856 1314 1.53 - - 0.815 - - - 0.715 - - - GDNF family receptor alpha 2 [Source:NCBI gene;Acc:395993]
49. PAX-9 PAX-9 491 1.526 - - - 0.760 0.766 - - - - -
50. ANGPTL1 ENSGALG00000004290 1922 1.524 - - - 0.722 - - - - - 0.802 angiopoietin like 1 [Source:NCBI gene;Acc:770850]
51. TNNI2 ENSGALG00000006591 690 1.519 - - 0.773 - 0.746 - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
52. CYP1B1 ENSGALG00000025822 3143 1.514 - - - - - - - - 0.725 0.789 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
53. PTCH1 ENSGALG00000012620 4840 1.51 - - - - - 0.787 0.723 - - - patched 1 [Source:NCBI gene;Acc:395806]
54. PITX3 ENSGALG00000005613 1518 1.509 - - 0.756 - - - - - 0.753 - paired like homeodomain 3
55. MYBPC1 ENSGALG00000012783 317 1.498 - - 0.772 0.726 - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
56. CRIP1 ENSGALG00000002771 4270 1.482 - - 0.734 0.748 - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
57. CASQ2 ENSGALG00000015018 157 1.476 - - 0.712 - - - - - - 0.764 calsequestrin 2 [Source:NCBI gene;Acc:395198]
58. HSPB7L ENSGALG00000028183 795 0.894 0.894 - - - - - - - - - heat shock protein beta-7-like
59. MYL2 ENSGALG00000004582 2245 0.888 0.888 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
60. CSRP3 ENSGALG00000004044 456 0.888 0.888 - - - - - - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
61. TPM4 ENSGALG00000002563 15621 0.881 0.881 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
62. MYBPC3 ENSGALG00000008148 315 0.879 0.879 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
63. LASP-2 LASP-2 4415 0.869 0.869 - - - - - - - - -
64. SERPINB1 ENSGALG00000019555 29 0.869 - - - - - 0.869 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
65. BRT-1 BRT-1 26083 0.868 - - - - 0.868 - - - - -
66. RAC3 ENSGALG00000040606 355 0.865 - - - - - 0.865 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
67. BVES ENSGALG00000015410 435 0.863 0.863 - - - - - - - - - blood vessel epicardial substance [Source:NCBI gene;Acc:408032]
68. POLB ENSGALG00000040828 7462 0.859 - - - - - 0.859 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
69. ADNP2 ENSGALG00000035669 318 0.858 - - - - - 0.858 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
70. DIAPH3 ENSGALG00000016937 1069 0.858 - - - - - 0.858 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
71. SMOC2 ENSGALG00000011205 340 0.857 - - - - - 0.857 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
72. CCDC141 ENSGALG00000020788 606 0.856 0.856 - - - - - - - - - coiled-coil domain containing 141, transcript variant X5
73. ASAP2 ENSGALG00000016419 1393 0.855 - - - - - 0.855 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
74. UNC45B ENSGALG00000002186 399 0.854 0.854 - - - - - - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
75. MXRA5 ENSGALG00000016635 352 0.853 - - - - - 0.853 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
76. PRKDC ENSGALG00000042469 449 0.852 - - - - - 0.852 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
77. EF1A EF1A 2378 0.852 0.852 - - - - - - - - -
78. SH2D1B ENSGALG00000028448 17 0.85 - - - - - 0.850 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
79. CDC40 ENSGALG00000015061 6118 0.849 - - - - - 0.849 - - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
80. TECRL ENSGALG00000038771 126 0.849 0.849 - - - - - - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
81. KIF7 ENSGALG00000006611 33 0.848 - - - - - 0.848 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
82. PNPLA4 ENSGALG00000016618 142 0.847 - - - - - 0.847 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
83. OFD1 ENSGALG00000016576 1916 0.846 - - - - - 0.846 - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
84. OLFML1 ENSGALG00000027184 19 0.845 - - - - - 0.845 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
85. MCC ENSGALG00000000208 61 0.844 - - - - - 0.844 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
86. ENSGALG00000002946 ENSGALG00000002946 56 0.844 - - - - - 0.844 - - - -
87. MYOD1 ENSGALG00000006216 568 0.842 - - - - - - - - - 0.842 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
88. GPD1L2 ENSGALG00000012061 31 0.842 - - - - - 0.842 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
89. KERA ENSGALG00000011270 4204 0.841 - - - - - - - - - 0.841 keratocan [Source:NCBI gene;Acc:373995]
90. HJURP ENSGALG00000015363 54 0.84 - - - - - 0.840 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
91. SCAF8 ENSGALG00000013635 421 0.838 - - - - - 0.838 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
92. LOC415478 ENSGALG00000021171 100 0.834 - - - - - 0.834 - - - - transmembrane protein 2-like, transcript variant X2
93. ELMSAN1 ENSGALG00000009282 79 0.834 - - - - - 0.834 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
94. LGR5 ENSGALG00000010163 2931 0.834 - - - - - - - - - 0.834 leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
95. JSC JSC 7982 0.834 - - - - - - - - - 0.834
96. C1orf168 C1orf168 98 0.834 - - - - - 0.834 - - - -
97. GYPC ENSGALG00000011566 99 0.833 - - - - - 0.833 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
98. NIPAL4 ENSGALG00000039687 29 0.833 - - - - - 0.833 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
99. KLHL40 ENSGALG00000005292 61 0.832 - - - - - 0.832 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
100. ACN9 ACN9 269 0.831 - - - - - 0.831 - - - -

There are 215 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA