Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-6681

Gene Name Gene ID Reads Annotation
gga-mir-6681 ENSGALG00000027840 546 gga-mir-6681 [Source:miRBase;Acc:MI0022502]











Genes with expression patterns similar to gga-mir-6681

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6681 ENSGALG00000027840 546 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-6681 [Source:miRBase;Acc:MI0022502]
2. PDCD7 ENSGALG00000021027 3807 1.864 - - - - - - - 0.974 - 0.890 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
3. MAN1A1 ENSGALG00000014878 1061 1.843 - - - - - - - 0.990 - 0.853 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
4. SLC37A4 ENSGALG00000007716 2263 1.727 - - - - - - - 0.990 0.737 - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
5. DENND1A ENSGALG00000001157 503 1.709 - - - - - - - - 0.862 0.847 DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
6. SIAH2 ENSGALG00000010395 2126 1.701 - - - - - - - 0.988 - 0.713 siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
7. BSDC1 ENSGALG00000003405 3701 1.682 - - - - - - - - 0.866 0.816 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
8. TRIM24 ENSGALG00000012823 2725 1.643 - - - - - - - - 0.767 0.876 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
9. EP3 EP3 741 1.6 - - - - - - - - 0.712 0.888
10. COL24A1 ENSGALG00000006864 161 1.592 - - 0.751 - - - - - 0.841 - collagen type XXIV alpha 1 chain, transcript variant X4
11. ROBO1 ENSGALG00000015511 213 1.55 - - 0.751 - - - - - - 0.799 roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249]
12. AHSA2 1504 1.548 - - - - - - - - 0.707 0.841 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
13. CALCOCO2 ENSGALG00000001525 3121 1.508 - - - - - - - - 0.705 0.803 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
14. ENSGALG00000021835 ENSGALG00000021835 424 0.999 - - - - - - - 0.999 - -
15. CHGA ENSGALG00000010820 1028 0.999 - - - - - - - 0.999 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
16. FRYL ENSGALG00000014103 314 0.999 - - - - - - - 0.999 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
17. AGO1 ENSGALG00000002249 125 0.999 - - - - - - - 0.999 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
18. PRKAG2 ENSGALG00000006219 504 0.999 - - - - - - - 0.999 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
19. RFX3 ENSGALG00000010179 305 0.999 - - - - - - - 0.999 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
20. ZNF148 ENSGALG00000012049 365 0.999 - - - - - - - 0.999 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
21. NGFR ENSGALG00000035950 13452 0.998 - - - - - - - 0.998 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
22. ENSGALG00000016701 ENSGALG00000016701 418 0.998 - - - - - - - 0.998 - -
23. CLEC3B ENSGALG00000030969 363 0.998 - - - - - - - 0.998 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
24. BIN1 ENSGALG00000011541 2273 0.998 - - - - - - - 0.998 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
25. ENSGALG00000026309 ENSGALG00000026309 360 0.998 - - - - - - - 0.998 - -
26. GMFB ENSGALG00000012208 894 0.998 - - - - - - - 0.998 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
27. SZT2 ENSGALG00000028561 255 0.997 - - - - - - - 0.997 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
28. N4BP2L1 ENSGALG00000017072 1371 0.997 - - - - - - - 0.997 - - NEDD4 binding protein 2 like 1, transcript variant X2
29. LRRC42 ENSGALG00000010743 384 0.997 - - - - - - - 0.997 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
30. xcc-b100_1894L ENSGALG00000007564 462 0.996 - - - - - - - 0.996 - - UPF0061 protein xcc-b100_1894-like
31. C16orf93 C16orf93 3351 0.996 - - - - - - - 0.996 - -
32. GHR_1 ENSGALG00000014855 198 0.995 - - - - - - - 0.995 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
33. LMO4 ENSGALG00000006252 3686 0.995 - - - - - - - 0.995 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
34. TBC1D16 ENSGALG00000007054 2324 0.994 - - - - - - - 0.994 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
35. GPR155 ENSGALG00000014209 1281 0.993 - - - - - - - 0.993 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
36. ALDH6 ALDH6 771 0.992 - - - - - - - 0.992 - -
37. ENSGALG00000025773 ENSGALG00000025773 977 0.992 - - - - - - - 0.992 - -
38. ZC3H11A ENSGALG00000000541 2712 0.992 - - - - - - - 0.992 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
39. YY1 ENSGALG00000017388 1933 0.991 - - - - - - - 0.991 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
40. CDC37L1 ENSGALG00000014448 2283 0.991 - - - - - - - 0.991 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
41. TBC1D19 ENSGALG00000029673 1868 0.991 - - - - - - - 0.991 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
42. THAP4 ENSGALG00000006283 1707 0.99 - - - - - - - 0.990 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
43. SENP2 ENSGALG00000031128 1162 0.99 - - - - - - - 0.990 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
44. CCNI ENSGALG00000011457 3203 0.99 - - - - - - - 0.990 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
45. C7H2ORF76 ENSGALG00000012113 1947 0.99 - - - - - - - 0.990 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
46. IBA57 ENSGALG00000005328 4362 0.989 - - - - - - - 0.989 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
47. PNPT1 ENSGALG00000043545 1306 0.988 - - - - - - - 0.988 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
48. BOC ENSGALG00000015152 4868 0.987 - - - - - - - 0.987 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
49. MED20 ENSGALG00000003474 4583 0.985 - - - - - - - 0.985 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
50. SLC4A3 ENSGALG00000011224 2161 0.985 - - - - - - - 0.985 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
51. WBP4 ENSGALG00000016949 5858 0.985 - - - - - - - 0.985 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
52. COQ5 ENSGALG00000007185 5614 0.984 - - - - - - - 0.984 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
53. ATP6V0E2 ENSGALG00000020754 2648 0.983 - - - - - - - 0.983 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
54. ASAP2 ENSGALG00000016419 1393 0.981 - - - - - - - 0.981 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
55. KIF3B ENSGALG00000006604 2968 0.98 - - - - - - - 0.980 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
56. CLASP2 ENSGALG00000032647 1821 0.98 - - - - - - - 0.980 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
57. SCARF1 2103 0.979 - - - - - - - 0.979 - - scavenger receptor class F member 1, transcript variant X2
58. ECHDC3 ENSGALG00000006690 1299 0.977 - - - - - - - 0.977 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
59. GTSE1 ENSGALG00000004897 2865 0.976 - - - - - - - 0.976 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
60. TRAPPC12 ENSGALG00000016387 2593 0.975 - - - - - - - 0.975 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
61. TTC17 ENSGALG00000039558 3301 0.974 - - - - - - - 0.974 - - tetratricopeptide repeat domain 17
62. CAMK2G ENSGALG00000005088 5037 0.974 - - - - - - - 0.974 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
63. ACTR3B ENSGALG00000006292 2235 0.974 - - - - - - - 0.974 - - ARP3 actin related protein 3 homolog B, transcript variant X1
64. FBXL7 ENSGALG00000031947 2480 0.973 - - - - - - - 0.973 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
65. ST14 ENSGALG00000001331 1655 0.973 - - - - - - - 0.973 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
66. INPP5B ENSGALG00000001606 458 0.973 - - - - - - - - - 0.973 inositol polyphosphate-5-phosphatase B [Source:HGNC Symbol;Acc:HGNC:6077]
67. C5H15ORF57 C5H15ORF57 4113 0.97 - - - - - - - 0.970 - -
68. IDS ENSGALG00000009154 1177 0.97 - - - - - - - 0.970 - - iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
69. CNOT2 ENSGALG00000010042 7612 0.969 - - - - - - - 0.969 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
70. SURF2 ENSGALG00000003181 3500 0.968 - - - - - - - 0.968 - - surfeit 2 [Source:NCBI gene;Acc:417156]
71. ENSGALG00000005785 ENSGALG00000005785 1570 0.968 - - - - - - - 0.968 - -
72. TSPAN5 ENSGALG00000012227 8703 0.966 - - - - - - - 0.966 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
73. SECISBP2 ENSGALG00000010694 6990 0.965 - - - - - - - 0.965 - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
74. PDHX ENSGALG00000033753 2799 0.964 - - - - - - - 0.964 - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
75. MMP17 3885 0.963 - - - - - - - 0.963 - - matrix metallopeptidase 17
76. BRF1 ENSGALG00000011705 3406 0.963 - - - - - - - 0.963 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
77. CYB5R3 ENSGALG00000014122 7664 0.963 - - - - - - - 0.963 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
78. PDCD4 ENSGALG00000008700 574 0.962 - - - - - - - - - 0.962 programmed cell death 4 [Source:NCBI gene;Acc:374191]
79. SEMA3C ENSGALG00000040444 5404 0.959 - - - - - - - 0.959 - - semaphorin 3C [Source:NCBI gene;Acc:374090]
80. SLC15A4 ENSGALG00000002695 2729 0.959 - - - - - - - - - 0.959 solute carrier family 15 member 4 [Source:HGNC Symbol;Acc:HGNC:23090]
81. RBM34 ENSGALG00000029915 5618 0.958 - - - - - - - 0.958 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
82. VDAC2 ENSGALG00000005002 12592 0.957 - - - - - - - 0.957 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
83. POLR1E ENSGALG00000005395 8953 0.956 - - - - - - - 0.956 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
84. ABTB1 ENSGALG00000005999 2446 0.955 - - - - - - - 0.955 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
85. CCDC75 CCDC75 4865 0.955 - - - - - - - 0.955 - -
86. TADA1L TADA1L 6659 0.952 - - - - - - - 0.952 - -
87. TXNRD2 ENSGALG00000001988 1208 0.952 - - - - - - - - - 0.952 thioredoxin reductase 2 [Source:NCBI gene;Acc:416782]
88. FAM160B1 ENSGALG00000031404 3153 0.951 - - - - - - - 0.951 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
89. KIAA1551 ENSGALG00000045168 3435 0.947 - - - - - - - 0.947 - - KIAA1551, transcript variant X1
90. HABP4 ENSGALG00000012628 2894 0.944 - - - - - - - 0.944 - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
91. CLIC4 ENSGALG00000001262 11497 0.942 - - - - - - - 0.942 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
92. C5orf24 ENSGALG00000006371 1573 0.942 - - - - - - - - - 0.942 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
93. PERP PERP 734 0.94 - - - - - - - - - 0.940
94. MED14 ENSGALG00000016238 4685 0.936 - - - - - - - 0.936 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
95. CEP55 ENSGALG00000006639 258 0.935 - - - - - - - - - 0.935 centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]
96. RAB34 ENSGALG00000026315 1193 0.935 - - - - - - - - - 0.935 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
97. NKRF ENSGALG00000008645 3531 0.933 - - - - - - - 0.933 - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
98. SUPT4H1 ENSGALG00000000944 8675 0.931 - - - - - - - 0.931 - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
99. SLC35F6 ENSGALG00000016589 5172 0.931 - - - - - - - 0.931 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
100. SRA1 ENSGALG00000040453 266 0.93 - - - - - - - - - 0.930 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]

There are 512 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA