Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-6665

Gene Name Gene ID Reads Annotation
gga-mir-6665 ENSGALG00000028814 430 gga-mir-6665 [Source:miRBase;Acc:MI0022485]











Genes with expression patterns similar to gga-mir-6665

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6665 ENSGALG00000028814 430 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-6665 [Source:miRBase;Acc:MI0022485]
2. TMEM51 ENSGALG00000035819 83 0.877 - - - - - - - 0.877 - - transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]
3. ENSGALG00000029084 ENSGALG00000029084 890 0.868 - - - - - - - - 0.868 -
4. gga-mir-99a ENSGALG00000018242 192 0.854 - - - - - - - - 0.854 - gga-mir-99a [Source:miRBase;Acc:MI0001173]
5. ZNF507 ENSGALG00000004532 78 0.848 - - - - - - - - 0.848 - zinc finger protein 507, transcript variant X2
6. LHFPL4 ENSGALG00000037636 221 0.829 - - - - - - - - 0.829 - LHFPL tetraspan subfamily member 4 [Source:HGNC Symbol;Acc:HGNC:29568]
7. IRAK4 ENSGALG00000009586 289 0.825 - - - - - - - - 0.825 - interleukin 1 receptor associated kinase 4 [Source:NCBI gene;Acc:417796]
8. ERMP1 ENSGALG00000000438 1136 0.821 - - - - - - - - 0.821 - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
9. SUZ12 ENSGALG00000003277 177 0.82 - - - - - - - - 0.820 - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
10. NCF4 ENSGALG00000038141 216 0.819 - - - - - - - - 0.819 - neutrophil cytosolic factor 4 [Source:NCBI gene;Acc:418052]
11. HTRA3 ENSGALG00000034673 512 0.818 - - - - - - - 0.818 - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
12. ZNF710 ENSGALG00000036163 215 0.815 - - - - - - - - 0.815 - zinc finger protein 710 [Source:HGNC Symbol;Acc:HGNC:25352]
13. DAAM1 ENSGALG00000012017 81 0.811 - - - - - - - 0.811 - - Gallus gallus dishevelled associated activator of morphogenesis 1 (DAAM1), mRNA. [Source:RefSeq mRNA;Acc:NM_001322368]
14. STAMBPL1 ENSGALG00000006331 38 0.809 - - - - - - - - - 0.809 STAM binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:24105]
15. ERCC8 ENSGALG00000014732 1181 0.807 - - - - - - - - 0.807 - ERCC excision repair 8, CSA ubiquitin ligase complex subunit [Source:HGNC Symbol;Acc:HGNC:3439]
16. AMACR ENSGALG00000003326 2657 0.804 - - - - - - - - 0.804 - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
17. SYNGR1 ENSGALG00000027665 737 0.803 - - - - - - - - 0.803 - synaptogyrin 1 [Source:NCBI gene;Acc:418015]
18. WDR41 ENSGALG00000004350 16 0.802 - - - - - - - - - 0.802 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
19. FUCA1 ENSGALG00000004112 2154 0.802 - - - - - - - - 0.802 - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
20. PAX-7 PAX-7 3856 0.801 - - - - - - - 0.801 - -
21. CNST ENSGALG00000010649 18 0.791 - - - - - - - - - 0.791 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
22. GPR155 ENSGALG00000014209 1281 0.791 - - - - - - - - 0.791 - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
23. UROC1 ENSGALG00000006306 75 0.785 - - - - - - - - - 0.785 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
24. PIGM ENSGALG00000010768 41 0.784 - - - - - - - - - 0.784 phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
25. MMACHC ENSGALG00000010234 77 0.783 - - - - - - - - - 0.783 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]
26. TMEM206 ENSGALG00000009822 80 0.781 - - - - - - - - - 0.781 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
27. FBXL8 ENSGALG00000003201 847 0.781 - - - - - - - - 0.781 - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
28. RPUSD2 ENSGALG00000041216 9 0.778 - - - - - - - - - 0.778 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
29. ATP6V0E1 10 0.775 - - - - - - - - - 0.775 ATPase H+ transporting V0 subunit e1
30. PPM1H ENSGALG00000009805 3 0.775 - - - - - - - - - 0.775 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
31. ENSGALG00000016213 ENSGALG00000016213 33 0.775 - - - - - - - - - 0.775
32. HOXD11 ENSGALG00000039629 658 0.775 - - - - - - - - - 0.775 homeobox D11 [Source:NCBI gene;Acc:395328]
33. AGO2 ENSGALG00000040957 25 0.775 - - - - - - - - - 0.775 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
34. CYP2H1 CYP2H1 363 0.775 - - - - - - - - - 0.775
35. ENSGALG00000026657 ENSGALG00000026657 4 0.775 - - - - - - - - - 0.775
36. OLFM1 ENSGALG00000002515 1841 0.774 - - - - - - 0.774 - - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
37. ECI2 ENSGALG00000012809 3692 0.773 - - - - - - - - 0.773 - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
38. ADORA2B ENSGALG00000014182 26 0.773 - - - - - - - - - 0.773 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
39. LCAT ENSGALG00000028928 484 0.768 - - - - - - - - - 0.768 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
40. TPP1 52 0.766 - - - - - - - - - 0.766 tripeptidyl peptidase 1
41. SLC12A8 ENSGALG00000012045 39 0.766 - - - - - - - - - 0.766 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
42. MOCS2 ENSGALG00000014906 4974 0.766 - - - - - - - - 0.766 - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
43. KYNU ENSGALG00000012418 353 0.765 - - - - - - - - - 0.765 kynureninase, transcript variant X3
44. AGRP ENSGALG00000002244 27 0.764 - - - - - - - - - 0.764 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
45. MFSD9 ENSGALG00000016792 40 0.764 - - - - - - - - - 0.764 major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158]
46. TFB1M ENSGALG00000013647 84 0.763 - - - - - - - - - 0.763 transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
47. KIAA0430 268 0.763 - - - - - - 0.763 - - - KIAA0430, transcript variant X4
48. ENSGALG00000017261 ENSGALG00000017261 739 0.762 - - - - - - - - 0.762 -
49. GPC6 ENSGALG00000016900 13 0.759 - - - - - - - - - 0.759 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
50. ST6GALNAC3 ENSGALG00000009027 17 0.759 - - - - - - - - - 0.759 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
51. AUH ENSGALG00000021843 349 0.758 - - - - - - - - - 0.758 AU RNA binding methylglutaconyl-CoA hydratase [Source:NCBI gene;Acc:427269]
52. DYNC1I2 ENSGALG00000009551 5420 0.758 - - - - - - - - 0.758 - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
53. DLX3 ENSGALG00000040529 37 0.758 - - - - - - - - - 0.758 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
54. CAPN15 ENSGALG00000002018 3353 0.758 - - - - - - - - 0.758 - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
55. WDR72 ENSGALG00000004545 5 0.757 - - - - - - - - - 0.757 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
56. LOC112532477 ENSGALG00000027520 40 0.757 - - - - - - - - - 0.757 fibrinogen-like protein 1-like protein
57. GALNT11 ENSGALG00000006233 210 0.757 - - - - - - - - - 0.757 polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
58. C5orf22 ENSGALG00000012909 3537 0.756 - - - - - - - - 0.756 - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
59. ENTPD7 ENSGALG00000023691 46 0.755 - - - - - - - - - 0.755 ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
60. NEIL3 ENSGALG00000010719 47 0.754 - - - - - - - - - 0.754 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
61. NCAPH ENSGALG00000032270 2103 0.754 - - - - - - - - 0.754 - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
62. C5orf30 ENSGALG00000027512 1721 0.752 - - - - - - - - 0.752 - chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:HGNC:25052]
63. C11H16ORF70 C11H16ORF70 7 0.752 - - - - - - - - - 0.752
64. IKBKAP 4508 0.751 - - - - - - - - 0.751 - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
65. SLC3A1 ENSGALG00000009973 608 0.75 - - - - - - - - - 0.750 solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
66. EIF6 ENSGALG00000033993 14647 0.75 - - - - - - - - 0.750 - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
67. CEP135 ENSGALG00000013776 232 0.749 - - - - - - - - 0.749 - centrosomal protein 135 [Source:HGNC Symbol;Acc:HGNC:29086]
68. JAKMIP1 ENSGALG00000015528 11 0.748 - - - - - - - - - 0.748 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
69. SLC35D3 ENSGALG00000030545 55 0.748 - - - - - - - - - 0.748 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
70. FAM13A ENSGALG00000010371 19 0.747 - - - - - - - - - 0.747 family with sequence similarity 13 member A [Source:HGNC Symbol;Acc:HGNC:19367]
71. ENSGALG00000012250 ENSGALG00000012250 581 0.746 - - - - - - - - - 0.746
72. MTM1 ENSGALG00000009096 22 0.746 - - - - - - - 0.746 - - myotubularin 1 [Source:HGNC Symbol;Acc:HGNC:7448]
73. ACSS1 ENSGALG00000008632 397 0.745 - - - - - - - - - 0.745 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
74. ENSGALG00000016141 ENSGALG00000016141 10 0.744 - - - - - - - - - 0.744
75. PARPBP ENSGALG00000012756 1895 0.743 - - - - - - - - 0.743 - PARP1 binding protein [Source:NCBI gene;Acc:418092]
76. MAPK1 ENSGALG00000001501 34 0.74 - - - - - - - - - 0.740 mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
77. NXT2 ENSGALG00000008092 2477 0.739 - - - - - - - - 0.739 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
78. RSBN1 ENSGALG00000001860 761 0.738 - - - - - - - 0.738 - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
79. GPR20 ENSGALG00000041730 1926 0.736 - - - - - - - - 0.736 - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
80. P2RY12 ENSGALG00000036470 20 0.735 - - - - - - - 0.735 - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
81. FAM184B ENSGALG00000041854 43 0.732 - - - - - - - - - 0.732 family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
82. TNIP2 ENSGALG00000015666 28 0.732 - - - - - - - - - 0.732 TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
83. ATP13A3 ENSGALG00000007075 202 0.731 - - - - - - - - - 0.731 ATPase 13A3 [Source:HGNC Symbol;Acc:HGNC:24113]
84. GUSB ENSGALG00000002542 1882 0.728 - - - - - - - - - 0.728 glucuronidase beta [Source:NCBI gene;Acc:427823]
85. TMEM9 ENSGALG00000000226 635 0.727 - - - - - - - - - 0.727 transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
86. TICRR ENSGALG00000006631 495 0.727 - - - - - - - - 0.727 - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
87. ASIC2 ENSGALG00000000367 72 0.727 - - - - - - - 0.727 - - acid sensing ion channel subunit 2, transcript variant X2
88. INO80D ENSGALG00000029701 51 0.727 - - - - - - - - - 0.727 INO80 complex subunit D [Source:HGNC Symbol;Acc:HGNC:25997]
89. PFN2 313 0.726 - - - - - - 0.726 - - - profilin 2, transcript variant X2
90. ENSGALG00000018733 ENSGALG00000018733 175 0.725 - - - - - - - - - 0.725
91. COL24A1 ENSGALG00000006864 161 0.724 - - - - - - - - - 0.724 collagen type XXIV alpha 1 chain, transcript variant X4
92. HGF/SF HGF/SF 345 0.723 - - - - - - - - - 0.723
93. ENSGALG00000005445 ENSGALG00000005445 16 0.723 - - - - - - - - - 0.723
94. SLC37A2 ENSGALG00000035842 1183 0.722 - - - - - - - 0.722 - - solute carrier family 37 member 2 [Source:HGNC Symbol;Acc:HGNC:20644]
95. TBC1D8B ENSGALG00000009040 75 0.72 - - - - - - - - - 0.720 TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
96. UBE2K ENSGALG00000014290 2138 0.72 - - - - - - - - 0.720 - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
97. CPEB1 ENSGALG00000002150 335 0.718 - - - - - - - - 0.718 - cytoplasmic polyadenylation element binding protein 1 [Source:NCBI gene;Acc:415326]
98. MTMR12 ENSGALG00000003168 1130 0.717 - - - - - - - - 0.717 - myotubularin related protein 12 [Source:HGNC Symbol;Acc:HGNC:18191]
99. PAK2 ENSGALG00000006426 283 0.716 - - - - - - - - 0.716 - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
100. FASTKD5 ENSGALG00000045410 386 0.715 - - - - - - - - 0.715 - FAST kinase domains 5 [Source:HGNC Symbol;Acc:HGNC:25790]

There are 18 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA