Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-6642

Gene Name Gene ID Reads Annotation
gga-mir-6642 ENSGALG00000028521 370 gga-mir-6642 [Source:miRBase;Acc:MI0022461]











Genes with expression patterns similar to gga-mir-6642

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6642 ENSGALG00000028521 370 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-6642 [Source:miRBase;Acc:MI0022461]
2. METAP1 ENSGALG00000012239 1125 1.585 - - - - - - 0.808 - 0.777 - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
3. AFG3L2 ENSGALG00000013853 1138 1.446 - - 0.728 - - - 0.718 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
4. ENSGALG00000029113 ENSGALG00000029113 737 0.905 - - - - - - - - 0.905 -
5. CACNB2 ENSGALG00000008591 53 0.879 - - - - - - - - 0.879 - calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
6. TSPAN14 ENSGALG00000002414 69 0.86 - - 0.860 - - - - - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
7. CETP ENSGALG00000001234 18 0.857 - - - - - - - - 0.857 - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
8. ANKRD9 ENSGALG00000011376 525 0.848 - - 0.848 - - - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
9. TBX2 ENSGALG00000034297 57 0.825 - - - - - 0.825 - - - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
10. ITGB3BP ENSGALG00000010995 3754 0.823 - - 0.823 - - - - - - - integrin subunit beta 3 binding protein [Source:NCBI gene;Acc:424689]
11. C1H13ORF27 C1H13ORF27 635 0.819 - - - - - - 0.819 - - -
12. CCDC111 CCDC111 515 0.818 - - 0.818 - - - - - - -
13. MAN1B1 ENSGALG00000037375 308 0.817 - - - - - - - - 0.817 - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
14. HPS3 ENSGALG00000040089 44 0.815 - - 0.815 - - - - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
15. WDR35 157 0.814 - - - - - - 0.814 - - - WD repeat domain 35, transcript variant X1
16. C1QTNF2 ENSGALG00000027232 42 0.813 - - - - - 0.813 - - - - C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
17. MOK ENSGALG00000011366 85 0.811 - - 0.811 - - - - - - - MOK protein kinase [Source:HGNC Symbol;Acc:HGNC:9833]
18. NRSN2 ENSGALG00000045961 2 0.81 - - - - - 0.810 - - - - neurensin 2 [Source:HGNC Symbol;Acc:HGNC:16229]
19. SLC29A4 ENSGALG00000010497 43 0.809 - - - - - - - - 0.809 - solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
20. DOPEY1 279 0.805 - - - - - - - - 0.805 - dopey family member 1, transcript variant X8
21. LOC422106 ENSGALG00000019757 453 0.805 - - - - - - - - 0.805 - uncharacterized LOC422106
22. VWDE ENSGALG00000042443 160 0.804 - - - - - - 0.804 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
23. SH3KBP1 ENSGALG00000016420 1739 0.799 - - 0.799 - - - - - - - SH3 domain containing kinase binding protein 1 [Source:NCBI gene;Acc:418608]
24. PRKCE ENSGALG00000010000 99 0.797 - - 0.797 - - - - - - - protein kinase C epsilon, transcript variant X1
25. LYRM1 ENSGALG00000002273 1523 0.795 - - - - - - 0.795 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
26. DYNC1LI2 ENSGALG00000005241 25 0.794 - - - - - 0.794 - - - - dynein cytoplasmic 1 light intermediate chain 2 [Source:NCBI gene;Acc:415793]
27. C11orf57 C11orf57 4971 0.79 - - - - - - 0.790 - - -
28. ADCK2 ENSGALG00000012863 906 0.79 - - 0.790 - - - - - - - aarF domain containing kinase 2 [Source:HGNC Symbol;Acc:HGNC:19039]
29. ING1 ENSGALG00000016849 89 0.786 - - - - - - - - 0.786 - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
30. PPP2R3A ENSGALG00000034512 1091 0.785 - - - - - - 0.785 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
31. ADAM28 ENSGALG00000000357 57 0.784 - - - - - - - - 0.784 - ADAM metallopeptidase domain 28, transcript variant X2
32. HSF2BP ENSGALG00000016202 1696 0.783 - - - - - - 0.783 - - - heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:HGNC:5226]
33. CLEC3B ENSGALG00000030969 363 0.782 - - 0.782 - - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
34. SMARCD3 ENSGALG00000043137 401 0.782 - - - - - - 0.782 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
35. SLCO3A1 ENSGALG00000006871 1125 0.781 - - - - - - 0.781 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]
36. CHID1 ENSGALG00000006830 964 0.78 - - - - - - - - 0.780 - chitinase domain containing 1 [Source:NCBI gene;Acc:423103]
37. KIDINS220 ENSGALG00000016409 854 0.777 - - 0.777 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
38. TFB1M ENSGALG00000013647 84 0.775 - - - - - - 0.775 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
39. RNF170 ENSGALG00000015386 296 0.774 - - - - - - 0.774 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
40. ARFGEF1 ENSGALG00000034610 238 0.773 - - 0.773 - - - - - - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
41. BRN3 BRN3 52 0.772 - - - - - 0.772 - - - -
42. CEP89 ENSGALG00000004756 282 0.772 - - - - - - - - 0.772 - centrosomal protein 89 [Source:HGNC Symbol;Acc:HGNC:25907]
43. TYW5 ENSGALG00000008145 1691 0.771 - - - - - - 0.771 - - - tRNA-yW synthesizing protein 5 [Source:NCBI gene;Acc:424065]
44. TTC14 ENSGALG00000008889 3828 0.771 - - - - - - - - 0.771 - tetratricopeptide repeat domain 14 [Source:NCBI gene;Acc:424970]
45. SDCCAG8 ENSGALG00000010713 311 0.768 - - - - - - - - 0.768 - serologically defined colon cancer antigen 8, transcript variant X5
46. ENOPH1 ENSGALG00000011178 1683 0.768 - - - - - - - 0.768 - - enolase-phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:24599]
47. RCAN1 ENSGALG00000016014 95 0.766 - - 0.766 - - - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
48. CENPT ENSGALG00000028900 674 0.764 - - - - - - 0.764 - - - centromere protein T [Source:NCBI gene;Acc:415654]
49. TMEM132B ENSGALG00000002742 122 0.763 - - 0.763 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
50. ASH1L ENSGALG00000014638 803 0.76 - - - - - - 0.760 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
51. TMEM192 ENSGALG00000009528 2428 0.759 - - 0.759 - - - - - - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
52. RPE65 ENSGALG00000011259 51 0.759 - - - - - - 0.759 - - - RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
53. LLGL1 ENSGALG00000014408 15 0.759 - - 0.759 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
54. LOC419074 ENSGALG00000017336 1885 0.759 - - - - - - 0.759 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
55. ELAVL2 ENSGALG00000015799 585 0.759 - - - - - - 0.759 - - - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
56. FAM69A ENSGALG00000005918 157 0.757 - - - - - - 0.757 - - - family with sequence similarity 69 member A, transcript variant X4
57. TRAPPC12 ENSGALG00000016387 2593 0.757 - - - - - - 0.757 - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
58. LAMP1 ENSGALG00000037697 247 0.755 - - 0.755 - - - - - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
59. MRE11A MRE11A 5754 0.755 - - - - - - - - 0.755 -
60. EFCAB7 ENSGALG00000010998 13 0.755 - - - - - - 0.755 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
61. CAT-1 CAT-1 115 0.753 - - - - - - 0.753 - - -
62. IQCH ENSGALG00000007909 128 0.753 - - - - - - 0.753 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
63. PLEKHS1 ENSGALG00000020679 161 0.752 - - - - - - 0.752 - - - pleckstrin homology domain containing S1 [Source:HGNC Symbol;Acc:HGNC:26285]
64. C5NT1AL ENSGALG00000006608 277 0.751 - - - - - 0.751 - - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2
65. PTPN21 ENSGALG00000010616 129 0.75 - - - - - - 0.750 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
66. SETDB2 ENSGALG00000017006 1353 0.75 - - - - - - - - 0.750 - SET domain bifurcated 2 [Source:HGNC Symbol;Acc:HGNC:20263]
67. ARHGAP12 ENSGALG00000007254 479 0.75 - - - - - - 0.750 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
68. FAM3B ENSGALG00000016140 111 0.749 - - 0.749 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
69. LOC769139 ENSGALG00000026754 753 0.749 - - - - - - 0.749 - - - feather keratin 1-like, transcript variant X2
70. CBLN1 ENSGALG00000042664 15 0.748 - - - - - - 0.748 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
71. MAP3K19 ENSGALG00000028457 17 0.748 - - - - - - 0.748 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
72. MBL2 ENSGALG00000002507 17 0.748 - - - - - - 0.748 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
73. ENSGALG00000026925 ENSGALG00000026925 119 0.748 - - - - - - - - 0.748 -
74. FAM46C 13 0.748 - - - - - - 0.748 - - - family with sequence similarity 46 member C
75. CHST9 ENSGALG00000019489 21 0.748 - - - - - - 0.748 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
76. MTOR ENSGALG00000003339 328 0.748 - - - - - - 0.748 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
77. FANCB ENSGALG00000016569 1193 0.747 - - 0.747 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
78. MYLIP ENSGALG00000012704 983 0.747 - - - - - - 0.747 - - - myosin regulatory light chain interacting protein [Source:NCBI gene;Acc:420841]
79. CYTH1 ENSGALG00000007093 2453 0.747 - - - - - - 0.747 - - - cytohesin 1 [Source:NCBI gene;Acc:422085]
80. PANX1 ENSGALG00000039751 70 0.745 - - - - - - 0.745 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
81. ALKBH2 ENSGALG00000035152 1018 0.745 - - - - - - - - 0.745 - alkB homolog 2, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:416897]
82. TGM2 ENSGALG00000006775, ENSGALG00000029343 2347 0.744 - - - - - - - 0.744 - - transglutaminase 2 [Source:NCBI gene;Acc:396432]
83. GANC ENSGALG00000009036 731 0.744 - - - - - - 0.744 - - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
84. LOC112532477 ENSGALG00000027520 40 0.743 - - - - - - 0.743 - - - fibrinogen-like protein 1-like protein
85. DEGS1 ENSGALG00000009330 3599 0.743 - - - - - - 0.743 - - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
86. PIH1D3 ENSGALG00000004870 1365 0.742 - - - - - - 0.742 - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
87. PLK4 ENSGALG00000010195 514 0.741 - - - - - - 0.741 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
88. DNALI1 ENSGALG00000001996 64 0.741 - - 0.741 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
89. C8orf34 ENSGALG00000034561 286 0.741 - - - - - - 0.741 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
90. USP42 ENSGALG00000003378 1392 0.741 - - - - - - 0.741 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
91. ZNF341 ENSGALG00000002968 1028 0.74 - - 0.740 - - - - - - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
92. HN1L HN1L 247 0.74 - - - - - - 0.740 - - -
93. ANAPC7 ENSGALG00000003826 5484 0.74 - - - - - - 0.740 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
94. WSCD1 ENSGALG00000005886 539 0.739 - - - - - - 0.739 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
95. BMP7 ENSGALG00000007668 6645 0.739 - - 0.739 - - - - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
96. CXADR ENSGALG00000015701 96 0.738 - - - - - - 0.738 - - - coxsackie virus and adenovirus receptor, transcript variant X2
97. KIAA1244 KIAA1244 62 0.737 - - - - - - 0.737 - - -
98. SCTR ENSGALG00000012106 49 0.737 - - - - - - 0.737 - - - secretin receptor [Source:NCBI gene;Acc:770943]
99. ADAP2 ENSGALG00000003319 134 0.736 - - - - - - 0.736 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
100. SLC16A14 ENSGALG00000002897 157 0.736 - - - - - - 0.736 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]

There are 90 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA