Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gga-mir-6627

Gene Name Gene ID Reads Annotation
gga-mir-6627 gga-mir-6627 233











Genes with expression patterns similar to gga-mir-6627

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6627 gga-mir-6627 233 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. CNR1 ENSGALG00000037511 38 0.865 - - - - 0.865 - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
3. gga-mir-1458 ENSGALG00000030959 41 0.85 - - - - - 0.850 - - - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
4. SLC45A3 ENSGALG00000000703 85 0.842 - - - - 0.842 - - - - - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
5. ABHD3 ENSGALG00000014938 9 0.841 - - - - - - - - - 0.841 abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
6. CEP170B ENSGALG00000011639 71 0.841 - - - - 0.841 - - - - - centrosomal protein 170B, transcript variant X13
7. PRKAR2B ENSGALG00000008060 40 0.832 - - - - 0.832 - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
8. TRIM14 ENSGALG00000015315 22 0.832 - - - - 0.832 - - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
9. gga-mir-99a ENSGALG00000018242 192 0.832 - - - - 0.832 - - - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
10. IL22RA1 ENSGALG00000004221 71 0.832 - - - - 0.832 - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
11. THRB ENSGALG00000011294 7 0.832 - - - - 0.832 - - - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
12. ZNF839 ENSGALG00000011368 148 0.831 - - - - - - - 0.831 - - zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]
13. ZNFX1 ENSGALG00000004859 33 0.826 - - - - 0.826 - - - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
14. SLCO1B1 ENSGALG00000019276 7 0.825 - - - - 0.825 - - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
15. ENSGALG00000027427 ENSGALG00000027427 16 0.82 - - - - 0.820 - - - - -
16. PIK3R3 ENSGALG00000010335 374 0.812 - - - - - 0.812 - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
17. MALSU1 ENSGALG00000010954 51 0.806 - - - - 0.806 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
18. CYP26C1 ENSGALG00000043213 87 0.806 - - - - - - - 0.806 - - cytochrome P450 family 26 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:20577]
19. TAL2 ENSGALG00000023114 17 0.805 - - - - - 0.805 - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
20. GPR37L1 ENSGALG00000000607 166 0.805 - - - - - - - 0.805 - - G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]
21. CNKSR2 ENSGALG00000016391 131 0.803 - - - - - - - 0.803 - - connector enhancer of kinase suppressor of Ras 2, transcript variant X1
22. SERPINC1 ENSGALG00000004591 68 0.799 - - - - 0.799 - - - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
23. SCUBE1 ENSGALG00000014178 91 0.799 - - - - 0.799 - - - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
24. ENTPD5 ENSGALG00000010202 69 0.795 - - - - - 0.795 - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
25. CCDC96 9 0.795 - - - - - 0.795 - - - - coiled-coil domain containing 96
26. MYL3 ENSGALG00000005448 3379 0.794 - - - - - 0.794 - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
27. MAP3K21 ENSGALG00000011008 54 0.793 - - - - - - - 0.793 - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
28. ENSGALG00000005433 ENSGALG00000005433 55 0.793 - - - - 0.793 - - - - -
29. TARS2 ENSGALG00000043416 179 0.793 - - - - 0.793 - - - - - threonyl-tRNA synthetase 2, mitochondrial (putative)
30. TMEM51 ENSGALG00000035819 83 0.792 - - - - 0.792 - - - - - transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]
31. ENSGALG00000020103 ENSGALG00000020103 64 0.791 - - - - - - - 0.791 - -
32. ENSGALG00000010113 ENSGALG00000010113 508 0.786 - - - - - - - 0.786 - -
33. RNGTT ENSGALG00000015787 12 0.786 - - - - - 0.786 - - - - RNA guanylyltransferase and 5'-phosphatase [Source:HGNC Symbol;Acc:HGNC:10073]
34. KCTD18 ENSGALG00000008155 26 0.786 - - - - - 0.786 - - - - potassium channel tetramerization domain containing 18 [Source:HGNC Symbol;Acc:HGNC:26446]
35. HOPX ENSGALG00000011404 10 0.784 - - - - - 0.784 - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
36. SLC24A2 ENSGALG00000015080 54 0.784 - - - - 0.784 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
37. ASIC2 ENSGALG00000000367 72 0.782 - - - - - 0.782 - - - - acid sensing ion channel subunit 2, transcript variant X2
38. BDNF ENSGALG00000012163 159 0.782 - - - - - 0.782 - - - - brain derived neurotrophic factor [Source:NCBI gene;Acc:396186]
39. RAB37 ENSGALG00000027789 17 0.782 - - - - 0.782 - - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
40. DOCK5 ENSGALG00000000311 51 0.779 - - - - - 0.779 - - - - dedicator of cytokinesis 5, transcript variant X2
41. TMEM161B ENSGALG00000010896 36 0.776 - - - - - - - - - 0.776 transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
42. LOC770405 ENSGALG00000013105 25 0.775 - - - - 0.775 - - - - - SUN domain-containing protein 3-like, transcript variant X2
43. XDH ENSGALG00000008701 10 0.775 - - - - - - - 0.775 - - xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
44. ENSGALG00000028211 ENSGALG00000028211 1 0.775 - - - - - - - 0.775 - -
45. PRDM8 ENSGALG00000038372 928 0.772 - - - - - 0.772 - - - - PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
46. CDK6 ENSGALG00000009476 17 0.771 - - - - - - 0.771 - - - cyclin dependent kinase 6 [Source:NCBI gene;Acc:420558]
47. CDK14 ENSGALG00000009062 995 0.771 - - - - 0.771 - - - - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
48. WARS ENSGALG00000011228 193 0.769 - - - - 0.769 - - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
49. MAL2 ENSGALG00000040768 75 0.766 - - - - 0.766 - - - - - mal, T cell differentiation protein 2 [Source:NCBI gene;Acc:420280]
50. PLXNA4 ENSGALG00000006473 125 0.764 - - - 0.764 - - - - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
51. HHLA2 ENSGALG00000022871 19 0.763 - - - - 0.763 - - - - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
52. LDHD ENSGALG00000023828 60 0.76 - - - - 0.760 - - - - - lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
53. GRIK3 ENSGALG00000002098 111 0.757 - - - - - 0.757 - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
54. ENSGALG00000029120 ENSGALG00000029120 73 0.756 - - - - - - - 0.756 - -
55. SEMA3E ENSGALG00000038225 677 0.756 - - 0.756 - - - - - - - semaphorin 3E [Source:NCBI gene;Acc:374089]
56. GZF1_1 ENSGALG00000008350 92 0.751 - - - - - - - 0.751 - - GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]
57. KIAA1549L ENSGALG00000012020 33 0.749 - - - - 0.749 - - - - - KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
58. ANKH ENSGALG00000012964 273 0.749 - - - - - - - 0.749 - - ANKH inorganic pyrophosphate transport regulator [Source:NCBI gene;Acc:420917]
59. SRP54 ENSGALG00000023135 372 0.746 - - - - 0.746 - - - - - signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
60. SMAD2W ENSGALG00000014184 1773 0.742 - - - - - - - - - 0.742 SMAD family member 2-W, transcript variant X3
61. DZIP1L 45 0.737 - - - - - - - - - 0.737 DAZ interacting zinc finger protein 1 like, transcript variant X1
62. LOC100857745 ENSGALG00000027114 118 0.736 - - - - 0.736 - - - - - collagen alpha-1(I) chain-like
63. FAM83A ENSGALG00000041748 8 0.732 - - - - - - - 0.732 - - family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
64. TBC1D2B ENSGALG00000003322 54 0.732 - - - - - - - - - 0.732 TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
65. ENSGALG00000010218 ENSGALG00000010218 12 0.73 - - - - - - - - - 0.730
66. PALB2 ENSGALG00000006078 1549 0.724 - - - - 0.724 - - - - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
67. SUB1L1 ENSGALG00000027147 73 0.722 - - - - - 0.722 - - - - SUB1 homolog (S. cerevisiae)-like 1
68. SNORA28 SNORA28 12 0.722 - - - - - 0.722 - - - -
69. SYCP1 ENSGALG00000002511 13 0.722 - - - - - 0.722 - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
70. RHBDL3 ENSGALG00000003426 19 0.72 - - - - - - - - - 0.720 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
71. ENSGALG00000003611 ENSGALG00000003611 22 0.716 - - - - 0.716 - - - - -
72. URAH ENSGALG00000000549 484 0.716 - - - 0.716 - - - - - - 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
73. NUDT3 ENSGALG00000002830 7 0.715 - - - - - - - - - 0.715 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
74. SNORA77 SNORA77 5 0.715 - - - - - - - - - 0.715
75. MST MST 9 0.715 - - - - - - - - - 0.715
76. WNT7A ENSGALG00000005123 2 0.715 - - - - - - - - - 0.715 Wnt family member 7A [Source:NCBI gene;Acc:374168]
77. RAB9B ENSGALG00000004918 2 0.715 - - - - - - - - - 0.715 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
78. DAPK1 ENSGALG00000012608 17 0.715 - - - - - - - - - 0.715 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
79. LRRN3 ENSGALG00000009488 1 0.715 - - - - - - - - - 0.715 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
80. NT5E ENSGALG00000015833 5 0.715 - - - - - - - - - 0.715 5'-nucleotidase ecto
81. RBL2 ENSGALG00000003663 10 0.715 - - - - - - - - - 0.715 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
82. ENSGALG00000026496 ENSGALG00000026496 9 0.715 - - - - - - - - - 0.715
83. POLR3G ENSGALG00000014650 7 0.715 - - - - - - - - - 0.715 RNA polymerase III subunit G, transcript variant X2
84. IFN-GAMMA IFN-GAMMA 1 0.715 - - - - - - - - - 0.715
85. SNX13 ENSGALG00000010840 13 0.715 - - - - - - - - - 0.715 sorting nexin 13 [Source:NCBI gene;Acc:420598]
86. gga-mir-22 ENSGALG00000024507 2 0.715 - - - - - - - - - 0.715 gga-mir-22 [Source:miRBase;Acc:MI0006982]
87. GRAMD2 GRAMD2 3 0.715 - - - - - - - - - 0.715
88. C4orf47 ENSGALG00000013287 44 0.715 - - - - - - - - - 0.715 chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
89. RAB11FIP4 ENSGALG00000003227 62 0.715 - - - - - - 0.715 - - - RAB11 family interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30267]
90. TTC29 ENSGALG00000010009 4 0.715 - - - - - - - - - 0.715 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
91. EXOC6B ENSGALG00000016098 3 0.715 - - - - - - - - - 0.715 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
92. CAMTA1 ENSGALG00000039525 1 0.715 - - - - - - - - - 0.715 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
93. C8B ENSGALG00000010853 21 0.715 - - - - - - - - - 0.715 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
94. RUFY4 2 0.715 - - - - - - - - - 0.715 RUN and FYVE domain containing 4, transcript variant X5
95. RS1 ENSGALG00000016523 11 0.715 - - - - - - - - - 0.715 retinoschisin 1 [Source:NCBI gene;Acc:772315]
96. ACOT1L ENSGALG00000008752 6 0.715 - - - - - - - - - 0.715 acyl-CoA thioesterase 1-like
97. ESR2 ENSGALG00000011801 7 0.715 - - - - - - - - - 0.715 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
98. TRIM36 ENSGALG00000008188 1 0.715 - - - - - - - - - 0.715 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
99. ENSGALG00000004619 ENSGALG00000004619 3 0.715 - - - - - - - - - 0.715
100. FOSL2 ENSGALG00000010036 3 0.715 - - - - - - - - - 0.715 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]

There are 15 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA