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Results for gga-mir-6599

Gene Name Gene ID Reads Annotation
gga-mir-6599 ENSGALG00000028121 4746 gga-mir-6599 [Source:miRBase;Acc:MI0022544]











Genes with expression patterns similar to gga-mir-6599

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6599 ENSGALG00000028121 4746 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-6599 [Source:miRBase;Acc:MI0022544]
2. SPPL3 ENSGALG00000006979 3264 1.586 - - - - - - 0.783 0.803 - - signal peptide peptidase like 3 [Source:HGNC Symbol;Acc:HGNC:30424]
3. TANC1 ENSGALG00000012570 4196 1.539 - - 0.731 - - - - 0.808 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
4. SYBU ENSGALG00000036527 1221 1.538 - - 0.803 - - - 0.735 - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
5. IVD ENSGALG00000040267 5820 1.531 - - 0.810 - - - 0.721 - - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
6. METTL6 ENSGALG00000040665 4467 1.529 - - 0.787 - - - - - - 0.742 methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
7. FURIN ENSGALG00000008341 2609 1.507 - - 0.709 - - - - 0.798 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
8. MRPL15 ENSGALG00000041086 16820 1.506 - - - - - - 0.795 - - 0.711 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
9. ATPAF1 ENSGALG00000010444 3677 1.495 - - 0.770 - - - - - - 0.725 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
10. GPR107 ENSGALG00000004052 3392 1.487 - - 0.704 - - - 0.783 - - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
11. TMEM2 ENSGALG00000015138 4709 1.486 - - - - - - 0.703 0.783 - - transmembrane protein 2, transcript variant X4
12. CTNNBIP1 ENSGALG00000026306 8049 1.484 - - 0.760 - - - 0.724 - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
13. SEC14L1 ENSGALG00000001684 2776 1.473 - - 0.736 - - - - 0.737 - - SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
14. API5 ENSGALG00000037968 18265 1.471 - - 0.767 - - - 0.704 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
15. FBXL17 ENSGALG00000000276 2443 1.469 - - 0.767 - - - - - - 0.702 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
16. FARSB ENSGALG00000005236 10738 1.467 - - 0.734 - - - 0.733 - - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
17. TBPL1 ENSGALG00000013981 3710 0.841 - - 0.841 - - - - - - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
18. GNS ENSGALG00000009856 3045 0.839 - - 0.839 - - - - - - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
19. LRSAM1 ENSGALG00000008819 2068 0.837 - - - - - - - 0.837 - - leucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25135]
20. SMO ENSGALG00000036114 6559 0.836 - - - - - - - 0.836 - - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
21. WDR89 ENSGALG00000011827 1481 0.833 - - 0.833 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
22. CHAIRY-1 CHAIRY-1 1830 0.827 - - - - - - 0.827 - - -
23. MPG ENSGALG00000028691 1874 0.826 - - 0.826 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
24. ZOV3 ZOV3 3267 0.826 - - 0.826 - - - - - - -
25. BAG5 ENSGALG00000031062 4498 0.824 - - - - - - 0.824 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
26. CIRH1A CIRH1A 6975 0.824 - - - - - - 0.824 - - -
27. VRTN ENSGALG00000010232 692 0.823 - - 0.823 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
28. LRRC40 ENSGALG00000011301 3409 0.822 - - - - - - - 0.822 - - leucine rich repeat containing 40 [Source:NCBI gene;Acc:424713]
29. TMEM38B ENSGALG00000027472 2465 0.819 - - 0.819 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
30. STRBP ENSGALG00000029927 3516 0.819 - - - - - - 0.819 - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
31. OSBPL8 ENSGALG00000010246 4565 0.817 - - - - - - - 0.817 - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
32. WDR11 ENSGALG00000035013 3393 0.815 - - 0.815 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
33. SALL4 ENSGALG00000041365 6760 0.814 - - 0.814 - - - - - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
34. ZNF423 ENSGALG00000003891 103 0.813 - - 0.813 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
35. EYA3 ENSGALG00000000777 922 0.813 - - 0.813 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:NCBI gene;Acc:395717]
36. TTC39A ENSGALG00000010540 1025 0.812 - - 0.812 - - - - - - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
37. RFNG ENSGALG00000002841 1643 0.809 - - 0.809 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395789]
38. SLU7 ENSGALG00000034414 5386 0.808 - - 0.808 - - - - - - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
39. NLRP1L ENSGALG00000023546 3195 0.808 - - - - - - 0.808 - - - NLR family, pyrin domain containing 1-like, transcript variant X8
40. WDFY2 ENSGALG00000017019 2384 0.808 - - - - - - 0.808 - - - WD repeat and FYVE domain containing 2 [Source:NCBI gene;Acc:770107]
41. ACP6 ENSGALG00000015485 3147 0.807 - - - - - - 0.807 - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
42. EIF2AK2 ENSGALG00000010560 749 0.807 - - 0.807 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
43. RAB3B ENSGALG00000010567 894 0.807 - - 0.807 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
44. CDV3 ENSGALG00000032316 693 0.806 - - 0.806 - - - - - - - CDV3 homolog [Source:NCBI gene;Acc:420693]
45. AZI1 AZI1 6732 0.805 - - - - - - 0.805 - - -
46. EXTL2 ENSGALG00000027984 808 0.805 - - 0.805 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
47. DPH3 3317 0.804 - - 0.804 - - - - - - - diphthamide biosynthesis 3
48. LRP2 ENSGALG00000010858 363 0.803 - - 0.803 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
49. TSEN2 ENSGALG00000004981 1929 0.802 - - 0.802 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
50. TRIM45 ENSGALG00000014818 1258 0.801 - - 0.801 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
51. RUFY2 1442 0.801 - - 0.801 - - - - - - - RUN and FYVE domain containing 2, transcript variant X1
52. ARPC1B ENSGALG00000032588 2407 0.801 - - - - - - - 0.801 - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
53. IP6K1 ENSGALG00000002510 827 0.801 - - 0.801 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
54. C19H17ORF85 C19H17ORF85 2538 0.8 - - 0.800 - - - - - - -
55. MAN2B2 ENSGALG00000015537 2267 0.8 - - - - - - 0.800 - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
56. ENSGALG00000026628 ENSGALG00000026628 1395 0.799 - - 0.799 - - - - - - -
57. FOPNL ENSGALG00000006532 2922 0.797 - - 0.797 - - - - - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
58. GEMIN2 ENSGALG00000010154 7695 0.796 - - - - - - 0.796 - - - gem nuclear organelle associated protein 2 [Source:NCBI gene;Acc:423336]
59. NIPSNAP3L ENSGALG00000027334 7514 0.796 - - 0.796 - - - - - - - nipsnap homolog 3-like
60. NID2 ENSGALG00000012394 6717 0.796 - - - - - - 0.796 - - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
61. ENTPD5 ENSGALG00000010202 69 0.795 - - 0.795 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
62. PNPLA8 ENSGALG00000009505 2910 0.794 - - - - - - 0.794 - - - patatin like phospholipase domain containing 8 [Source:NCBI gene;Acc:417785]
63. TXNDC12 ENSGALG00000010569 13822 0.794 - - 0.794 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
64. MTA3 ENSGALG00000009925 1914 0.793 - - - - - - 0.793 - - - metastasis associated 1 family member 3 [Source:HGNC Symbol;Acc:HGNC:23784]
65. C8H1ORF52 C8H1ORF52 118 0.793 - - 0.793 - - - - - - -
66. LYPD6B ENSGALG00000028759 831 0.793 - - 0.793 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
67. C5orf30 ENSGALG00000027512 1721 0.792 - - 0.792 - - - - - - - chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:HGNC:25052]
68. AMMECR1L ENSGALG00000026728 2134 0.792 - - 0.792 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
69. COMMD4 ENSGALG00000001572 31664 0.791 - - - - - - 0.791 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
70. RPUSD1 ENSGALG00000005315 651 0.791 - - 0.791 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
71. Sep-02 Sep-02 206 0.79 - - 0.790 - - - - - - -
72. SORCS1 ENSGALG00000008465 468 0.789 - - 0.789 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
73. INTS9 ENSGALG00000016631 742 0.789 - - 0.789 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
74. FBXO34 ENSGALG00000032563 656 0.788 - - 0.788 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
75. SLC4A4 ENSGALG00000031105 534 0.788 - - 0.788 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
76. GRIK3 ENSGALG00000002098 111 0.788 - - 0.788 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
77. LRR1 ENSGALG00000012230 1062 0.787 - - 0.787 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
78. ENSGALG00000023180 ENSGALG00000023180 83 0.787 - - 0.787 - - - - - - -
79. PLEKHG5 ENSGALG00000027476 42 0.786 - - 0.786 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
80. NOVA1 ENSGALG00000009850 7584 0.786 - - 0.786 - - - - - - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
81. POMC ENSGALG00000016600 99 0.786 - - 0.786 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
82. RHOC ENSGALG00000001569 53 0.786 - - 0.786 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
83. MT1 MT1 218 0.786 - - 0.786 - - - - - - -
84. AP3M1 ENSGALG00000005070 712 0.785 - - 0.785 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
85. MGMT ENSGALG00000042949 53 0.784 - - 0.784 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
86. ATP2B2 ENSGALG00000030908 584 0.784 - - 0.784 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
87. GOLGA2 ENSGALG00000004881 677 0.784 - - 0.784 - - - - - - - golgin A2, transcript variant X7
88. PEX2 ENSGALG00000035752 4427 0.784 - - - - - - - 0.784 - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
89. TMEM70 ENSGALG00000033568 10720 0.784 - - - - - - 0.784 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
90. LARP7 ENSGALG00000012048 8393 0.784 - - - - - - 0.784 - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
91. TOMM5 ENSGALG00000026300 57842 0.783 - - 0.783 - - - - - - - translocase of outer mitochondrial membrane 5
92. CASP1 ENSGALG00000001049 1067 0.783 - - 0.783 - - - - - - - caspase 1, transcript variant X2
93. MSRA ENSGALG00000028032 2607 0.782 - - 0.782 - - - - - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
94. SDCBP ENSGALG00000015436 1228 0.782 - - 0.782 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
95. KIAA0195 KIAA0195 48 0.782 - - 0.782 - - - - - - -
96. FBF1 ENSGALG00000002179 1738 0.782 - - 0.782 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
97. ZNF276 ENSGALG00000000513 2410 0.782 - - 0.782 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
98. ATG12 ENSGALG00000002345 3607 0.781 - - - - - - 0.781 - - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
99. CCT8 ENSGALG00000015821 12161 0.781 - - 0.781 - - - - - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
100. DDX18 ENSGALG00000012147 12463 0.781 - - 0.781 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]

There are 335 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA