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Results for gga-mir-6587

Gene Name Gene ID Reads Annotation
gga-mir-6587 ENSGALG00000026386 9441 gga-mir-6587 [Source:miRBase;Acc:MI0022407]











Genes with expression patterns similar to gga-mir-6587

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6587 ENSGALG00000026386 9441 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-6587 [Source:miRBase;Acc:MI0022407]
2. RBM7 ENSGALG00000007017 8779 1.77 - - - - - - 0.782 0.988 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
3. CETN1 ENSGALG00000026741 7243 1.749 - - - - - - - 0.988 - 0.761 centrin 1 [Source:NCBI gene;Acc:422668]
4. MAP2K2 ENSGALG00000001267 3857 1.722 - - - - - - 0.735 0.987 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
5. ALS2 ENSGALG00000008415 2576 1.707 - - - - - - 0.727 0.980 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
6. ENSGALG00000017396 ENSGALG00000017396 9028 1.655 - - - - - - 0.754 0.901 - -
7. CDC42EP4 ENSGALG00000023364 9240 1.644 - - - - - - 0.758 0.886 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
8. Sep-02_1 Sep-02_1 19203 1.62 - - - - - - - 0.904 - 0.716
9. COX5A ENSGALG00000014121 55281 1.538 - - - - - - 0.781 - - 0.757 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
10. NEO1 ENSGALG00000001774 10165 1.526 - - - - - - 0.799 - - 0.727 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
11. SKAP2 ENSGALG00000030081 13746 1.521 - - - - - - 0.781 0.740 - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
12. PSPC1 ENSGALG00000017142 13036 1.494 - - - - - - 0.777 - - 0.717 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
13. COX17 ENSGALG00000014981 5646 1.492 - - - - - - 0.736 - - 0.756 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
14. TMEM115 ENSGALG00000026965 13050 1.481 - - - - - - 0.729 - - 0.752 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
15. CAMSAP1 ENSGALG00000001692 2617 1.48 - - - - - - 0.750 - - 0.730 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
16. RPF2 ENSGALG00000037087 12788 1.467 - - - - - - 0.717 - - 0.750 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
17. PROM1 ENSGALG00000014496 2494 1.452 - - - - - - 0.714 - - 0.738 prominin 1 [Source:NCBI gene;Acc:422825]
18. POLR2B ENSGALG00000011387 4864 1.445 - - - - - - 0.734 - - 0.711 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
19. ARHGAP21 ENSGALG00000007721 3961 1.439 - - - - - - 0.720 - - 0.719 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
20. MLST8 ENSGALG00000005878 8116 1.422 - - - - - - 0.706 0.716 - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
21. PPM1D ENSGALG00000035610 6530 0.992 - - - - - - - 0.992 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
22. PDHB ENSGALG00000029576 12254 0.991 - - - - - - - 0.991 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
23. CDCA7 ENSGALG00000040833 7484 0.989 - - - - - - - 0.989 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
24. CENPL ENSGALG00000038411 4867 0.989 - - - - - - - 0.989 - - centromere protein L [Source:NCBI gene;Acc:426563]
25. FUNDC2 ENSGALG00000029585 9334 0.989 - - - - - - - 0.989 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
26. RCOR3 ENSGALG00000009871 7022 0.989 - - - - - - - 0.989 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
27. CRNKL1 ENSGALG00000008429 7280 0.989 - - - - - - - 0.989 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
28. EXO1 ENSGALG00000010748 7572 0.988 - - - - - - - 0.988 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
29. TMEM192 ENSGALG00000009528 2428 0.987 - - - - - - - 0.987 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
30. TMEM126A ENSGALG00000014066 6149 0.987 - - - - - - - 0.987 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
31. ATE1 ENSGALG00000009502 3751 0.987 - - - - - - - 0.987 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
32. NBL1 ENSGALG00000040297 8165 0.987 - - - - - - - 0.987 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
33. NVL ENSGALG00000009322 5286 0.987 - - - - - - - 0.987 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
34. C6ORF192 C6ORF192 4224 0.987 - - - - - - - 0.987 - -
35. G3BP2 ENSGALG00000010882 21129 0.987 - - - - - - - 0.987 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
36. RFT1 ENSGALG00000001945 2446 0.985 - - - - - - - 0.985 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
37. SLC35D1 ENSGALG00000011121 4456 0.985 - - - - - - - 0.985 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
38. RNFT1 ENSGALG00000005205 2888 0.985 - - - - - - - 0.985 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
39. CRELD2 ENSGALG00000008551 2084 0.985 - - - - - - - 0.985 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
40. PMP22 ENSGALG00000031425 5358 0.984 - - - - - - - 0.984 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
41. ZNF319 ENSGALG00000000999 1272 0.983 - - - - - - - 0.983 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
42. SNIP1 ENSGALG00000002010 1429 0.983 - - - - - - - 0.983 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
43. RAI2 ENSGALG00000016538 1074 0.982 - - - - - - - 0.982 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
44. JSC JSC 7982 0.982 - - - - - - - 0.982 - -
45. DLC1 ENSGALG00000013715 5297 0.982 - - - - - - - 0.982 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
46. PIGL ENSGALG00000004492 669 0.982 - - - - - - - 0.982 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
47. SPDYA ENSGALG00000017392 503 0.981 - - - - - - - 0.981 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
48. ELAVL4 ENSGALG00000010533 4978 0.981 - - - - - - - 0.981 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
49. ATP2B4 ENSGALG00000003601 3746 0.981 - - - - - - - 0.981 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
50. ENSGALG00000012250 ENSGALG00000012250 581 0.981 - - - - - - - 0.981 - -
51. RNF168 ENSGALG00000006392 507 0.981 - - - - - - - 0.981 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
52. FBF1 ENSGALG00000002179 1738 0.98 - - - - - - - 0.980 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
53. TTL ENSGALG00000008614 3991 0.98 - - - - - - - 0.980 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
54. PDCD6IP ENSGALG00000033500 580 0.98 - - - - - - - 0.980 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
55. PPP3R1 ENSGALG00000023648 3417 0.979 - - - - - - - 0.979 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
56. YAF2 ENSGALG00000009540 8452 0.979 - - - - - - - 0.979 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
57. COX7A2L ENSGALG00000037996 13646 0.976 - - - - - - - 0.976 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
58. IFNAR2 ENSGALG00000041867 1596 0.974 - - - - - - - 0.974 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
59. GARS ENSGALG00000005694 18264 0.972 - - - - - - - 0.972 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
60. AP2B1 ENSGALG00000042125 13229 0.972 - - - - - - - 0.972 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
61. RFC3 ENSGALG00000017064 7011 0.967 - - - - - - - 0.967 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
62. KIAA0196 KIAA0196 4011 0.957 - - - - - - - 0.957 - -
63. TPD52 ENSGALG00000040167 9891 0.955 - - - - - - - 0.955 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
64. SBNO1 ENSGALG00000003392 6731 0.953 - - - - - - - 0.953 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
65. XPO5 ENSGALG00000010341 24765 0.952 - - - - - - - 0.952 - - exportin 5 [Source:NCBI gene;Acc:421450]
66. INPP5A ENSGALG00000010493 6769 0.95 - - - - - - - 0.950 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
67. PRTG ENSGALG00000037336 34665 0.948 - - - - - - - 0.948 - - protogenin [Source:NCBI gene;Acc:415407]
68. SFT2D1 ENSGALG00000020005 10855 0.948 - - - - - - - 0.948 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
69. NUP107 ENSGALG00000009934 2097 0.944 - - - - - - - 0.944 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
70. ANKRD11 ENSGALG00000006222 12327 0.938 - - - - - - - 0.938 - - ankyrin repeat domain 11, transcript variant X2
71. MRPL54 ENSGALG00000027611 39450 0.934 - - - - - - - 0.934 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
72. XRCC5 ENSGALG00000011492 6802 0.927 - - - - - - - 0.927 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
73. PPA2 ENSGALG00000010582 22301 0.923 - - - - - - - 0.923 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
74. CHD4 ENSGALG00000013565 25695 0.912 - - - - - - - 0.912 - - chromodomain helicase DNA binding protein 4
75. SLC25A39 ENSGALG00000042894 10654 0.906 - - - - - - - 0.906 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
76. FAM98A ENSGALG00000010428 9585 0.894 - - - - - - - 0.894 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
77. TNFAIP8L1 ENSGALG00000004266 12611 0.894 - - - - - - - 0.894 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
78. LRPPRC ENSGALG00000009967 17091 0.892 - - - - - - - 0.892 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
79. ZOV3 ZOV3 3267 0.879 - - - - - - - 0.879 - -
80. ENSGALG00000023609 ENSGALG00000023609 6933 0.854 - - - - - - - 0.854 - -
81. POLR1B ENSGALG00000032273 3845 0.849 - - - - - - 0.849 - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
82. TRAF7 ENSGALG00000005767 4615 0.848 - - - - - - 0.848 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
83. ATP6V1G1 ENSGALG00000007190 82534 0.846 - - - - - - - 0.846 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
84. SNX12 ENSGALG00000005659 9503 0.846 - - - - - - - - - 0.846 sorting nexin 12 [Source:NCBI gene;Acc:428704]
85. LIMD1 ENSGALG00000035623 7282 0.845 - - - - - - 0.845 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
86. DLGAP4 ENSGALG00000001046 6872 0.844 - - - - - - 0.844 - - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
87. BRP44 BRP44 17093 0.841 - - - - - - 0.841 - - -
88. HMGB3 ENSGALG00000009071 12011 0.839 - - - - - - 0.839 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
89. MGAT4B ENSGALG00000005924 2663 0.837 - - - - - - 0.837 - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
90. MAPK6 ENSGALG00000031448 28384 0.836 - - - - - - - 0.836 - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
91. CYB5R2 ENSGALG00000032372 7967 0.835 - - - - - - 0.835 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
92. EPFIP1L ENSGALG00000007683 18050 0.832 - - - - - - 0.832 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
93. DERL1 ENSGALG00000033950 15074 0.831 - - - - - - 0.831 - - - derlin 1 [Source:NCBI gene;Acc:420350]
94. GTF2H5 ENSGALG00000013733 12293 0.829 - - - - - - - 0.829 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
95. GPALPP1 ENSGALG00000031567 4221 0.829 - - - - - - 0.829 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
96. IGBP1 ENSGALG00000044628 9200 0.827 - - - - - - 0.827 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
97. CIB1 ENSGALG00000008302 13946 0.823 - - - - - - 0.823 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
98. ILF2 ENSGALG00000011570 23050 0.822 - - - - - - 0.822 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
99. DCPS ENSGALG00000031143 10191 0.822 - - - - - - 0.822 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
100. ASUN ASUN 17129 0.82 - - - - - - 0.820 - - -

There are 672 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA