Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-6579-2

Gene Name Gene ID Reads Annotation
gga-mir-6579-2 ENSGALG00000035346 7 gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]











Genes with expression patterns similar to gga-mir-6579-2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6579-2 ENSGALG00000035346 7 3 - - 1.000 - - 1.000 1.000 - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
2. HLCS ENSGALG00000016047 30 1.613 - - 0.756 - - 0.857 - - - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
3. ENSGALG00000006003 ENSGALG00000006003 11 1 - - - - - - 1.000 - - -
4. SYT15 ENSGALG00000002046 3 1 - - - - - 1.000 - - - - synaptotagmin 15, transcript variant X1
5. EDNRB2 ENSGALG00000007466 1 1 - - - - - 1.000 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
6. FIP1L1 ENSGALG00000013943 15 1 - - - - - 1.000 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
7. Six3os1 Six3os1 1 1 - - - - - 1.000 - - - -
8. HAPLN4 ENSGALG00000026563 9 1 - - - - - 1.000 - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
9. SLC30A1 ENSGALG00000009858 5 1 - - - - - 1.000 - - - - solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
10. ENSGALG00000021375 ENSGALG00000021375 1 1 - - - - - 1.000 - - - -
11. TTC28 ENSGALG00000005676 36 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
12. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - 1.000 - - - -
13. RPL3L ENSGALG00000005458 9 1 - - - - - - 1.000 - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
14. ENSGALG00000012674 ENSGALG00000012674 109 1 - - - - - - 1.000 - - -
15. ENSGALG00000016269 ENSGALG00000016269 3 1 - - - - - - 1.000 - - -
16. PTGES ENSGALG00000038013 77 1 - - - - - - 1.000 - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
17. ENSGALG00000026341 ENSGALG00000026341 1 1 - - - - - 1.000 - - - -
18. LFABP LFABP 5 1 - - - - - 1.000 - - - -
19. ESAM ENSGALG00000032943 1 1 - - - - - 1.000 - - - - endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:17474]
20. ENSGALG00000018528 ENSGALG00000018528 1 1 - - - - - 1.000 - - - -
21. RASSF6 ENSGALG00000011664 7 1 - - - - - 1.000 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
22. KLHL1 ENSGALG00000016907 21 1 - - - - - 1.000 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
23. JADE3 ENSGALG00000016727 55 1 - - - - - - 1.000 - - - jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]
24. CTH ENSGALG00000011331 2390 1 - - - - - - 1.000 - - - cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
25. RNF212 ENSGALG00000040805 3 1 - - - - - - 1.000 - - - ring finger protein 212 [Source:HGNC Symbol;Acc:HGNC:27729]
26. ATP10D ENSGALG00000014192 94 1 - - - - - - 1.000 - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
27. ENSGALG00000020819 ENSGALG00000020819 2 1 - - - - - 1.000 - - - -
28. NKX2-5 ENSGALG00000002886 81 1 - - - - - 1.000 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
29. gga-mir-30d ENSGALG00000018290 9 1 - - - - - - 1.000 - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
30. STK36 ENSGALG00000011371 6 1 - - - - - - 1.000 - - - serine/threonine kinase 36 [Source:HGNC Symbol;Acc:HGNC:17209]
31. TRAIL-LIKE ENSGALG00000007240 8 1 - - - - - 1.000 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
32. CFD ENSGALG00000040832 222 1 - - - - - - 1.000 - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
33. IFNAR1 ENSGALG00000030363 22 1 - - - - - - 1.000 - - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
34. PTPN23 ENSGALG00000038522 93 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
35. PPFIA2 ENSGALG00000010958 27 1 - - - - - - 1.000 - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
36. GLP2R ENSGALG00000041800 10 1 - - - - - - 1.000 - - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
37. CNGA3 ENSGALG00000039826 3 1 - - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
38. LDLRAD3 ENSGALG00000038913 4 1 - - - - - 1.000 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
39. SPTBN5 395 1 - - - - - 1.000 - - - - spectrin beta, non-erythrocytic 5
40. GPR114 GPR114 46 1 - - - - - 1.000 - - - -
41. gga-mir-301a ENSGALG00000029989 5 1 - - - - - - 1.000 - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
42. CSGALNACT1 ENSGALG00000010125 5 1 - - - - - - 1.000 - - - chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
43. GGT5 ENSGALG00000040504 24 1 - - - - - 1.000 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
44. RBM47 ENSGALG00000014267 6 1 - - - - - 1.000 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
45. FXYD2 ENSGALG00000007320 168 1 - - - - - 1.000 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
46. UNC80 ENSGALG00000041563 15 1 - - - - - - 1.000 - - - unc-80 homolog, NALCN activator, transcript variant X3
47. EFCAB12 EFCAB12 15 0.983 - - - - - 0.983 - - - -
48. RECQL5 ENSGALG00000002424 16 0.979 - - - - - 0.979 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
49. CMTR2 ENSGALG00000002356 3 0.979 - - - - - 0.979 - - - - cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
50. FZD1 ENSGALG00000009064 76 0.974 - - - - - 0.974 - - - - frizzled class receptor 1 [Source:NCBI gene;Acc:374062]
51. UROC1 ENSGALG00000006306 75 0.973 - - - - - 0.973 - - - - urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
52. AMPD1 ENSGALG00000002082 228 0.962 - - - - - 0.962 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
53. ENSGALG00000027170 ENSGALG00000027170 6 0.954 - - - - - 0.954 - - - -
54. ADPGK ENSGALG00000001788 208 0.952 - - - - - - 0.952 - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
55. MYO1D ENSGALG00000000674 14 0.947 - - - - - 0.947 - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
56. RIBC2 ENSGALG00000014232 13 0.947 - - - - - 0.947 - - - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
57. MBTPS2 ENSGALG00000016382 259 0.944 - - - - - 0.944 - - - - membrane bound transcription factor peptidase, site 2 [Source:HGNC Symbol;Acc:HGNC:15455]
58. TNIP2 ENSGALG00000015666 28 0.941 - - - - - 0.941 - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
59. FADD ENSGALG00000007625 142 0.927 - - - - - - 0.927 - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
60. CEP170B ENSGALG00000011639 71 0.921 - - - - - 0.921 - - - - centrosomal protein 170B, transcript variant X13
61. SMG7 ENSGALG00000004667 707 0.918 - - - - - 0.918 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
62. SRRL ENSGALG00000002638 26 0.918 - - - - - - 0.918 - - - serine racemase-like, transcript variant X8
63. NMNAT3 ENSGALG00000026187 11 0.916 - - - - - - 0.916 - - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
64. GTPBP6 ENSGALG00000016717 17 0.903 - - - - - 0.903 - - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
65. HPS6 ENSGALG00000020741 4 0.903 - - - - - 0.903 - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
66. TNR ENSGALG00000004526 6 0.892 - - - - - 0.892 - - - - tenascin R [Source:NCBI gene;Acc:396213]
67. INSC ENSGALG00000032558 74 0.889 - - - - - 0.889 - - - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
68. SPERT ENSGALG00000016981 145 0.889 - - - - - 0.889 - - - - spermatid associated [Source:NCBI gene;Acc:418848]
69. C14orf159 C14orf159 7 0.889 - - - - - - 0.889 - - -
70. LRAT ENSGALG00000009276 220 0.882 - - - - - 0.882 - - - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
71. KCNE3 ENSGALG00000022696 561 0.87 - - - - - - 0.870 - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
72. EPYC ENSGALG00000011269 17 0.87 - - - - - 0.870 - - - - epiphycan [Source:NCBI gene;Acc:417890]
73. SNORA26 SNORA26 3 0.869 - - 0.869 - - - - - - -
74. WNK1 ENSGALG00000012992 67 0.869 - - - - - 0.869 - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
75. ARSG ENSGALG00000004193 21 0.869 - - - - - 0.869 - - - - arylsulfatase G [Source:NCBI gene;Acc:771433]
76. MAGI3 ENSGALG00000001816 12 0.866 - - 0.866 - - - - - - - membrane associated guanylate kinase, WW and PDZ domain containing 3 [Source:NCBI gene;Acc:419877]
77. PABPN1L ENSGALG00000006242 3 0.865 - - 0.865 - - - - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
78. ASMT ENSGALG00000016685 3 0.865 - - 0.865 - - - - - - - acetylserotonin O-methyltransferase [Source:NCBI gene;Acc:396286]
79. ENSGALG00000006592 ENSGALG00000006592 83 0.861 - - - - - 0.861 - - - -
80. TMEM206 ENSGALG00000009822 80 0.858 - - - - - 0.858 - - - - transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
81. CR1L ENSGALG00000023950 98 0.854 - - - - - 0.854 - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
82. RNaseP RNaseP 30 0.848 - - - - - 0.848 - - - -
83. TSPAN33 ENSGALG00000013528 832 0.845 - - - - - - 0.845 - - - tetraspanin 33, transcript variant X2
84. MARCO ENSGALG00000012119 5 0.844 - - 0.844 - - - - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
85. GGCL1 GGCL1 3 0.844 - - 0.844 - - - - - - -
86. P2RY14 ENSGALG00000040367 1 0.844 - - 0.844 - - - - - - - purinergic receptor P2Y, G-protein coupled, 14 [Source:NCBI gene;Acc:101749627]
87. HPGD ENSGALG00000010769 5 0.844 - - 0.844 - - - - - - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
88. BCO2 ENSGALG00000007868 1 0.844 - - 0.844 - - - - - - - beta-carotene oxygenase 2 [Source:HGNC Symbol;Acc:HGNC:18503]
89. BSN ENSGALG00000001849 1 0.844 - - 0.844 - - - - - - - bassoon presynaptic cytomatrix protein [Source:HGNC Symbol;Acc:HGNC:1117]
90. PRA1 PRA1 2 0.844 - - 0.844 - - - - - - -
91. STARD3 ENSGALG00000014607 115 0.844 - - 0.844 - - - - - - - StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]
92. U1 U1 1 0.844 - - 0.844 - - - - - - -
93. PRKD3 ENSGALG00000010612 2 0.844 - - 0.844 - - - - - - - protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]
94. RUNDC3A ENSGALG00000026518 2 0.844 - - 0.844 - - - - - - - RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
95. SOX30 ENSGALG00000045860 5 0.844 - - 0.844 - - - - - - - SRY-box 30 [Source:HGNC Symbol;Acc:HGNC:30635]
96. SMAD9 ENSGALG00000017050 11 0.844 - - 0.844 - - - - - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
97. ITPRIP ENSGALG00000025780 4 0.844 - - 0.844 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:29370]
98. HID1 ENSGALG00000007808 2 0.844 - - 0.844 - - - - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
99. BPIFB4 ENSGALG00000006679 1 0.844 - - 0.844 - - - - - - - BPI fold containing family B member 4 [Source:HGNC Symbol;Acc:HGNC:16179]
100. IL6 ENSGALG00000010915 8 0.839 - - - - - - 0.839 - - - interleukin 6 [Source:NCBI gene;Acc:395337]

There are 89 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA