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Results for gga-mir-6544

Gene Name Gene ID Reads Annotation
gga-mir-6544 ENSGALG00000027916 19 gga-mir-6544 [Source:miRBase;Acc:MI0022360]











Genes with expression patterns similar to gga-mir-6544

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-6544 ENSGALG00000027916 19 2 - - - 1.000 - - - - - 1.000 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
2. NMBR ENSGALG00000013813 15 1.999 - - - 1.000 - - - - - 0.999 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
3. TMEM201 ENSGALG00000002527 2 1 - - - 1.000 - - - - - - transmembrane protein 201
4. SNORA50 SNORA50 9 1 - - - 1.000 - - - - - -
5. TNFAIP3 ENSGALG00000013861 11 1 - - - - - - - - - 1.000 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
6. TBC1D24L ENSGALG00000001244 2 1 - - - 1.000 - - - - - - TBC1 domain family member 24-like, transcript variant X2
7. TLR7 ENSGALG00000016590 6 1 - - - 1.000 - - - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
8. FAM151B ENSGALG00000015577 11 1 - - - 1.000 - - - - - - family with sequence similarity 151 member B
9. CCDC28A ENSGALG00000013834 8 1 - - - 1.000 - - - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
10. PLSCR5 ENSGALG00000006807 9 1 - - - 1.000 - - - - - - phospholipid scramblase family member 5 [Source:HGNC Symbol;Acc:HGNC:19952]
11. gga-mir-6659 ENSGALG00000028216 6 1 - - - 1.000 - - - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
12. C3orf58 ENSGALG00000002347 27 0.999 - - - - - - - - - 0.999 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
13. BOK ENSGALG00000005772 117 0.998 - - - - - - - - - 0.998 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
14. TRAK2 ENSGALG00000008370 46 0.997 - - - - - - - - - 0.997 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
15. AKAP11 ENSGALG00000022739 82 0.993 - - - - - - - - - 0.993 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
16. TNN ENSGALG00000004538 21 0.993 - - - - - - - - - 0.993 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
17. ZMYND10 ENSGALG00000035883 58 0.992 - - - - - - - - - 0.992 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
18. CLIC3 ENSGALG00000038789 233 0.991 - - - - - - - - - 0.991 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
19. TBX5 ENSGALG00000008253 820 0.991 - - - - - - - - - 0.991 T-box 5 [Source:NCBI gene;Acc:373988]
20. TRMT61A ENSGALG00000011522 14 0.991 - - - - - - - - - 0.991 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
21. SLC7A2 ENSGALG00000013627 58 0.989 - - - - - - - - - 0.989 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
22. KAT6B ENSGALG00000005035 301 0.986 - - - - - - - - - 0.986 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
23. TMEM200B ENSGALG00000024318 117 0.986 - - - - - - - - - 0.986 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
24. INADL INADL 51 0.984 - - - - - - - - - 0.984
25. TNFAIP2 ENSGALG00000011446 32 0.984 - - - - - - - - - 0.984 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
26. PKD2 ENSGALG00000010921 55 0.983 - - - - - - - - - 0.983 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
27. SENP7 ENSGALG00000044642 48 0.982 - - - - - - - - - 0.982 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
28. ING5 ENSGALG00000006317 149 0.981 - - - - - - - - - 0.981 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
29. FAM154B FAM154B 175 0.978 - - - - - - - - - 0.978
30. SMEK1 SMEK1 95 0.978 - - - - - - - - - 0.978
31. SLC20A1 ENSGALG00000013740 40 0.978 - - - - - - - - - 0.978 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
32. PHF11 ENSGALG00000019094 770 0.977 - - - - - - - - - 0.977 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
33. KCNB1 ENSGALG00000004758 620 0.974 - - - - - - - - - 0.974 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
34. GSS ENSGALG00000003281 57 0.974 - - - - - - - - - 0.974 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
35. TRAF-5 TRAF-5 102 0.971 - - - - - - - - - 0.971
36. ROGDI ENSGALG00000001841 313 0.971 - - - - - - - - - 0.971 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
37. PDE3A ENSGALG00000013143 28 0.971 - - - - - - - - - 0.971 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
38. BMP2K ENSGALG00000010885 37 0.971 - - - - - - - - - 0.971 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
39. OSBPL2 ENSGALG00000005195 94 0.969 - - - - - - - - - 0.969 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
40. ZNF385B ENSGALG00000009012 290 0.969 - - - - - - - - - 0.969 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
41. PXK ENSGALG00000007052 121 0.968 - - - - - - - - - 0.968 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
42. LMBR1 ENSGALG00000030379 29 0.968 - - - - - - - - - 0.968 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
43. TM6SF1 ENSGALG00000006027 20 0.967 - - - - - - - - - 0.967 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
44. ERRFI1 ENSGALG00000000535 83 0.966 - - - - - - - - - 0.966 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
45. ZEB2 ENSGALG00000040465 315 0.959 - - - - - - - - - 0.959 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
46. MYCN ENSGALG00000016462 1930 0.957 - - - - - - - - - 0.957 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
47. TGFBRAP1 ENSGALG00000016795 81 0.955 - - - - - - - - - 0.955 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
48. KIF24 ENSGALG00000005806 124 0.953 - - - - - - - - - 0.953 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
49. SRR ENSGALG00000003155 93 0.952 - - - - - - - - - 0.952 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
50. SERAC1 ENSGALG00000013732 24 0.95 - - - - - - - - - 0.950 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
51. CREB5 ENSGALG00000038265 92 0.95 - - - - - - - - - 0.950 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
52. SMOC2 ENSGALG00000011205 340 0.946 - - - - - - - - - 0.946 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
53. MYH11 ENSGALG00000006520 166 0.944 - - - - - - - - - 0.944 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
54. SLC30A9 ENSGALG00000031415 36 0.944 - - - - - - - - - 0.944 solute carrier family 30 member 9
55. KIAA0895 ENSGALG00000036301 280 0.944 - - - - - - - - - 0.944 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
56. SRRD ENSGALG00000005614 234 0.944 - - - - - - - - - 0.944 SRR1 domain containing [Source:NCBI gene;Acc:416908]
57. NME6 ENSGALG00000038044 1231 0.941 - - - - - - - - - 0.941 NME/NM23 nucleoside diphosphate kinase 6
58. HS1BP3 ENSGALG00000016486 380 0.94 - - - - - - - - - 0.940 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
59. ITM2B ENSGALG00000016996 1112 0.939 - - - - - - - - - 0.939 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
60. BLOC1S2 ENSGALG00000005794 544 0.934 - - - - - - - - - 0.934 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
61. ATF2 ENSGALG00000009287 73 0.928 - - - - - - - - - 0.928 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
62. NAALAD2 202 0.927 - - - - - - - - - 0.927 N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
63. NR5A2 ENSGALG00000002182 392 0.927 - - - - - - - - - 0.927 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
64. KCNB2 ENSGALG00000031693 31 0.927 - - - - - - - - - 0.927 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
65. COQ2 ENSGALG00000041294 25 0.925 - - - - - - - - - 0.925 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
66. ENSGALG00000016494 ENSGALG00000016494 1 0.924 - - - 0.924 - - - - - -
67. ALDH6A1 ENSGALG00000010211 29 0.924 - - - - - - - - - 0.924 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
68. ENDOV 121 0.919 - - - - - - - - - 0.919 endonuclease V
69. TMEM116 ENSGALG00000004760 217 0.918 - - - - - - - - - 0.918 transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
70. LEO1 ENSGALG00000004696 111 0.917 - - - - - - - - - 0.917 LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
71. TRAIP ENSGALG00000002908 6901 0.914 - - - - - - - - - 0.914 TRAF interacting protein [Source:NCBI gene;Acc:415927]
72. NAPG ENSGALG00000013932 67 0.912 - - - - - - - - - 0.912 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
73. DMXL1 ENSGALG00000002227 88 0.912 - - - - - - - - - 0.912 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
74. MPP3 ENSGALG00000042521 1372 0.91 - - - - - - - - - 0.910 membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
75. MRM1 ENSGALG00000039523 2009 0.908 - - - - - - - - - 0.908 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
76. FAM192A ENSGALG00000021473 10213 0.907 - - - - - - - - - 0.907 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
77. MVP ENSGALG00000040471 1407 0.903 - - - - - - - - - 0.903 major vault protein [Source:NCBI gene;Acc:420049]
78. TUSC1 22 0.9 - - - - - - - - - 0.900 tumor suppressor candidate 1
79. ZHX3 ENSGALG00000039155 5 0.899 - - - 0.899 - - - - - - zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
80. RAD1 ENSGALG00000003365 1417 0.899 - - - - - - - - - 0.899 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
81. TPGS1 ENSGALG00000026780 688 0.896 - - - - - - - - - 0.896 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
82. MATR3 ENSGALG00000002478 12793 0.894 - - - - - - - - - 0.894 matrin 3 [Source:NCBI gene;Acc:373948]
83. MFSD2B ENSGALG00000016498 208 0.894 - - - - - - - - - 0.894 major facilitator superfamily domain containing 2B [Source:HGNC Symbol;Acc:HGNC:37207]
84. MB ENSGALG00000012541 260 0.888 - - - - - - - - - 0.888 myoglobin [Source:NCBI gene;Acc:418056]
85. TMEM129 ENSGALG00000015710 1519 0.886 - - - - - - - - - 0.886 transmembrane protein 129 [Source:NCBI gene;Acc:422900]
86. ZMIZ1 ENSGALG00000004850 114 0.886 - - - - - - - - - 0.886 zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]
87. TRMT11 ENSGALG00000014831 305 0.884 - - - - - - - - - 0.884 tRNA methyltransferase 11 homolog [Source:NCBI gene;Acc:378793]
88. CRAT ENSGALG00000037443 78 0.882 - - - - - - - - - 0.882 carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
89. CKLF ENSGALG00000005254 3365 0.882 - - - - - - - - - 0.882 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
90. GYPC ENSGALG00000011566 99 0.879 - - - - - - - - - 0.879 glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
91. FAM117B ENSGALG00000008466 81 0.878 - - - - - - - - - 0.878 family with sequence similarity 117 member B [Source:HGNC Symbol;Acc:HGNC:14440]
92. ELOVL1 ENSGALG00000009988 4000 0.876 - - - - - - - - - 0.876 ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
93. EXOSC8 ENSGALG00000017048 2939 0.876 - - - - - - - - - 0.876 exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
94. SBDS ENSGALG00000027989 112 0.875 - - - - - - - - - 0.875 SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
95. TNFRSF11B ENSGALG00000043167 911 0.873 - - - - - - - - - 0.873 TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
96. TDRD9 ENSGALG00000011565 146 0.872 - - - - - - - - - 0.872 tudor domain containing 9 [Source:HGNC Symbol;Acc:HGNC:20122]
97. CRTAC1 ENSGALG00000017378 15 0.871 - - - 0.871 - - - - - - cartilage acidic protein 1 [Source:NCBI gene;Acc:425346]
98. Sep-03 Sep-03 109 0.871 - - - 0.871 - - - - - -
99. MGMT ENSGALG00000042949 53 0.87 - - - 0.870 - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
100. THAP9 ENSGALG00000044141 1993 0.869 - - - - - - - - - 0.869 THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]

There are 143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA