Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-454

Gene Name Gene ID Reads Annotation
gga-mir-454 ENSGALG00000033526 22 gga-mir-454 [Source:miRBase;Acc:MI0006984]











Genes with expression patterns similar to gga-mir-454

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-454 ENSGALG00000033526 22 4 - - 1.000 1.000 1.000 - - 1.000 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
2. PARM1 ENSGALG00000010268 13 1.963 - - - - 1.000 - - 0.963 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
3. CP ENSGALG00000030773 119 1.841 - - - 0.975 - - - 0.866 - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
4. ENSGALG00000026161 ENSGALG00000026161 278 1.603 - - - 0.833 - - - 0.770 - -
5. LGALSL ENSGALG00000027096 390 1.583 - - - 0.809 - - - 0.774 - - galectin like [Source:NCBI gene;Acc:421278]
6. UPB1 ENSGALG00000006627 139 1.553 - - - 0.719 - - - 0.834 - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
7. ENSGALG00000014545 ENSGALG00000014545 285 1.548 - - - 0.786 - - - 0.762 - -
8. ARHGAP26 ENSGALG00000033938 31 1 - - - - 1.000 - - - - - Rho GTPase activating protein 26 [Source:NCBI gene;Acc:396113]
9. ENSGALG00000026134 ENSGALG00000026134 14 1 - - - - 1.000 - - - - -
10. PHOSPHO1 ENSGALG00000033683 22 1 - - - - 1.000 - - - - - phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
11. KAT2A ENSGALG00000003369 19 1 - - - - 1.000 - - - - - lysine acetyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:4201]
12. SEPT12 ENSGALG00000029027 611 1 - - - - 1.000 - - - - - septin 12 [Source:HGNC Symbol;Acc:HGNC:26348]
13. C1R ENSGALG00000014659 9 1 - - - - 1.000 - - - - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
14. GPR151 GPR151 3 1 - - - - 1.000 - - - - -
15. MAPK8IP3 ENSGALG00000029514 57 1 - - - - 1.000 - - - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
16. SKIV2L ENSGALG00000035499 45 1 - - - - 1.000 - - - - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
17. TEKT2 ENSGALG00000002319 2 1 - - - - 1.000 - - - - - tektin 2 [Source:HGNC Symbol;Acc:HGNC:11725]
18. ENSGALG00000001269 ENSGALG00000001269 5 1 - - - - 1.000 - - - - -
19. TRIM41 ENSGALG00000030569 5 1 - - - - 1.000 - - - - - tripartite motif containing 41 [Source:NCBI gene;Acc:417043]
20. FAM83G ENSGALG00000005087 3 1 - - - - 1.000 - - - - - family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
21. GP5 ENSGALG00000045125 3 1 - - - - 1.000 - - - - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
22. P2RY1 ENSGALG00000010357 11 1 - - - - 1.000 - - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
23. C12orf50 ENSGALG00000045093 9 1 - - - - 1.000 - - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
24. PLEKHG4 ENSGALG00000023898 65 1 - - - - 1.000 - - - - - pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
25. MYRIP ENSGALG00000041372 1 1 - - - - 1.000 - - - - - myosin VIIA and Rab interacting protein, transcript variant X4
26. ARHGAP39 ENSGALG00000001536 15 1 - - - - 1.000 - - - - - Rho GTPase activating protein 39, transcript variant X2
27. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - 1.000 - - - - -
28. AGTR1 ENSGALG00000038512 25 1 - - - - 1.000 - - - - - angiotensin II receptor type 1 [Source:NCBI gene;Acc:396065]
29. GAS2L1 ENSGALG00000036731 2 1 - - - - 1.000 - - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
30. C1orf43 C1orf43 100 1 - - - - 1.000 - - - - -
31. ENSGALG00000026922 ENSGALG00000026922 3 1 - - - - 1.000 - - - - -
32. KLF11 ENSGALG00000016440 65 0.995 - - - - - - - 0.995 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
33. ENSGALG00000018499 ENSGALG00000018499 100 0.995 - - - - - - - 0.995 - -
34. UBE3C ENSGALG00000006461 57 0.995 - - - - - - - 0.995 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
35. TAGAP ENSGALG00000013747 34 0.995 - - - - - - - 0.995 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
36. CPB1 ENSGALG00000006834 25 0.995 - - - - - - - 0.995 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
37. DHX58 ENSGALG00000023821 15 0.995 - - - - - - - 0.995 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
38. IRF-4 IRF-4 19 0.989 - - - - - - - 0.989 - -
39. MTERFD3 MTERFD3 20 0.98 - - - 0.980 - - - - - -
40. SH3GL1 ENSGALG00000001121 159 0.979 - - - - - - - 0.979 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
41. HTR1E ENSGALG00000015826 11 0.977 - - - 0.977 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
42. ZPBP2 ENSGALG00000013484 14 0.977 - - - 0.977 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
43. NUP160 ENSGALG00000043074 46 0.976 - - - 0.976 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
44. PSTPIP2 ENSGALG00000040136 37 0.976 - - - - - - - 0.976 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
45. SENP7 ENSGALG00000044642 48 0.974 - - - - - - - 0.974 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
46. HMGXB3 ENSGALG00000005770 119 0.974 - - - - - - - 0.974 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
47. ZDHHC8 ENSGALG00000002124 35 0.974 - - - 0.974 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
48. BTK ENSGALG00000004958 272 0.973 - - - - - - - 0.973 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
49. PVALB1 PVALB1 267 0.971 - - - - - - - 0.971 - -
50. HAGH ENSGALG00000005398 168 0.97 - - - - - - - 0.970 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
51. VEPH1 ENSGALG00000009682 51 0.969 - - - 0.969 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
52. VIP ENSGALG00000013604 153 0.969 - - - - - - - 0.969 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
53. TRAF2 ENSGALG00000042838 24 0.968 - - - 0.968 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
54. ACOX2 ENSGALG00000007132 47 0.965 - - - 0.965 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
55. ENSGALG00000028652 ENSGALG00000028652 65 0.965 - - - 0.965 - - - - - -
56. OXGR1 ENSGALG00000016891 13 0.965 - - - 0.965 - - - - - - oxoglutarate receptor 1
57. BEGAIN ENSGALG00000011236 35 0.964 - - - 0.964 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
58. PPP2CA_1 ENSGALG00000006462 3170 0.964 - - - - - - - 0.964 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
59. ZDHHC20 ENSGALG00000017126 58 0.96 - - - - - - - 0.960 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
60. PCASP2 ENSGALG00000027961 42 0.959 - - - - - - - 0.959 - - paracaspase 2 [Source:NCBI gene;Acc:429451]
61. RGS16 ENSGALG00000033535 139 0.956 - - - 0.956 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
62. KITLG ENSGALG00000011206 71 0.955 - - - 0.955 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
63. EPC1 ENSGALG00000007169 101 0.951 - - - - - - - 0.951 - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
64. RFESD ENSGALG00000014673 198 0.947 - - - 0.947 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
65. FBXO22 ENSGALG00000039897 377 0.946 - - - - - - - 0.946 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
66. OTUD7B ENSGALG00000013348 38 0.944 - - - 0.944 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
67. SLC6A2 ENSGALG00000003560 108 0.942 - - - - - - - 0.942 - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
68. CCDC73 ENSGALG00000012103 17 0.941 - - - - - - - 0.941 - - coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]
69. SMCR8 ENSGALG00000024082 44 0.941 - - - 0.941 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
70. SAMSN1 ENSGALG00000040926 88 0.938 - - - - - - - 0.938 - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
71. SFI1 104 0.935 - - - - - - - 0.935 - - SFI1 centrin binding protein, transcript variant X6
72. SPG20 22 0.933 - - - - 0.933 - - - - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
73. SACM1L ENSGALG00000040902 70 0.93 - - - - - - - 0.930 - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
74. OGDHL ENSGALG00000002266 57 0.93 - - - 0.930 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
75. CYP2J22 ENSGALG00000011394 76 0.928 - - - - - - - 0.928 - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
76. ARHGEF5 ENSGALG00000017276 32 0.928 - - - 0.928 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
77. MGEA5 116 0.925 - - - - - - - 0.925 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X1
78. MATN2 44 0.925 - - - 0.925 - - - - - - matrilin 2, transcript variant X9
79. CYTIP ENSGALG00000012545 25 0.922 - - - - - - - 0.922 - - cytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]
80. ANKRD26 ENSGALG00000009104 71 0.921 - - - - - - - 0.921 - - ankyrin repeat domain 26 [Source:NCBI gene;Acc:417764]
81. SVCT2 SVCT2 400 0.919 - - - - - - - 0.919 - -
82. DCT ENSGALG00000016899 37 0.917 - - - - - - - 0.917 - - dopachrome tautomerase [Source:NCBI gene;Acc:395775]
83. TNFAIP2 ENSGALG00000011446 32 0.915 - - - 0.915 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
84. NLGN4 NLGN4 283 0.914 - - - 0.914 - - - - - -
85. TK1 ENSGALG00000007191 277 0.91 - - - - - - - 0.910 - - thymidine kinase 1 [Source:NCBI gene;Acc:395719]
86. LHFPL5 ENSGALG00000039170 247 0.908 - - - - - - - 0.908 - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
87. ENSGALG00000025733 ENSGALG00000025733 197 0.905 - - - 0.905 - - - - - -
88. PITPNM2 ENSGALG00000003645 17 0.904 - - 0.904 - - - - - - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
89. CYP4A22 ENSGALG00000020688 741 0.903 - - - 0.903 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
90. KCNG3 ENSGALG00000009919 243 0.903 - - - - - - - 0.903 - - potassium voltage-gated channel modifier subfamily G member 3 [Source:HGNC Symbol;Acc:HGNC:18306]
91. PLXND1 ENSGALG00000008473 21 0.903 - - - - - - - 0.903 - - plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
92. SMG7 ENSGALG00000004667 707 0.9 - - - 0.900 - - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
93. EGLN3 ENSGALG00000010001 32 0.898 - - - - - - - 0.898 - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
94. KCTD17 ENSGALG00000042419 90 0.898 - - - 0.898 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
95. CLEC3B ENSGALG00000030969 363 0.894 - - - 0.894 - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
96. NOTCH1 ENSGALG00000002375 726 0.894 - - - 0.894 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
97. GRPEL2 ENSGALG00000002673 105 0.89 - - - - - - - 0.890 - - GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
98. TXLNG ENSGALG00000016547 503 0.89 - - - 0.890 - - - - - - taxilin gamma [Source:HGNC Symbol;Acc:HGNC:18578]
99. FBXL17 ENSGALG00000000276 2443 0.89 - - - 0.890 - - - - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
100. ATP11A ENSGALG00000041644 74 0.89 - - - - - - - 0.890 - - ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]

There are 233 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA