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Results for gga-mir-3526

Gene Name Gene ID Reads Annotation
gga-mir-3526 ENSGALG00000029121 41375 gga-mir-3526 [Source:miRBase;Acc:MI0015377]











Genes with expression patterns similar to gga-mir-3526

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-3526 ENSGALG00000029121 41375 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-3526 [Source:miRBase;Acc:MI0015377]
2. LASP-2 LASP-2 4415 1.573 0.815 - - - 0.758 - - - - -
3. SUCLG1 ENSGALG00000015961 14323 0.986 - - - - - - 0.986 - - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
4. GCSH ENSGALG00000032679 29231 0.951 - - - - - - 0.951 - - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
5. UTRN ENSGALG00000012256 9980 0.948 - - - - - - 0.948 - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
6. ETFA ENSGALG00000002925 24053 0.948 - - - - - - 0.948 - - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
7. ALYREF ENSGALG00000007237 48479 0.948 - - - - - - 0.948 - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
8. PTP4A1 ENSGALG00000016271 23953 0.947 - - - - - - 0.947 - - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
9. DHX15 ENSGALG00000014395 24041 0.947 - - - - - - 0.947 - - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
10. PLK1 ENSGALG00000006110 12892 0.945 - - - - - - 0.945 - - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
11. SFRP1 ENSGALG00000003473 5917 0.945 - - - - - - 0.945 - - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
12. TXNRD3 ENSGALG00000039363 8016 0.945 - - - - - - 0.945 - - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
13. ENSGALG00000007210 ENSGALG00000007210 2203 0.945 - - - - - - 0.945 - - -
14. ENSGALG00000002595 ENSGALG00000002595 32163 0.945 - - - - - - 0.945 - - -
15. FIG4 ENSGALG00000015070 3018 0.945 - - - - - - 0.945 - - - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
16. ATOX1 ENSGALG00000004176 16486 0.945 - - - - - - 0.945 - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
17. COQ9 ENSGALG00000001184 10174 0.945 - - - - - - 0.945 - - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
18. LGALS3 ENSGALG00000012173 3306 0.945 - - - - - - 0.945 - - - galectin 3 [Source:NCBI gene;Acc:373917]
19. ZFP161 ZFP161 3538 0.945 - - - - - - 0.945 - - -
20. CCNG1 ENSGALG00000001718 9873 0.945 - - - - - - 0.945 - - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
21. GSTA GSTA 3130 0.945 - - - - - - 0.945 - - -
22. DNAJC2 ENSGALG00000008249 28064 0.945 - - - - - - 0.945 - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
23. FAM63A 8470 0.945 - - - - - - 0.945 - - - family with sequence similarity 63 member A, transcript variant X2
24. UQCR11 ENSGALG00000001096 25245 0.944 - - - - - - 0.944 - - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
25. CCDC85A ENSGALG00000043080 7624 0.944 - - - - - - 0.944 - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
26. SUMO1 ENSGALG00000008435 19847 0.943 - - - - - - 0.943 - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
27. COX4I1 68632 0.943 - - - - - - 0.943 - - - cytochrome c oxidase subunit 4I1, transcript variant X1
28. PAPOLA ENSGALG00000033099 20532 0.943 - - - - - - 0.943 - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
29. PAK1IP1 ENSGALG00000012724 10907 0.941 - - - - - - 0.941 - - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
30. ENSGALG00000016007 ENSGALG00000016007 62448 0.937 - - - - - - 0.937 - - -
31. TOMM70A TOMM70A 24085 0.935 - - - - - - 0.935 - - -
32. C5H11ORF58 C5H11ORF58 36659 0.934 - - - - - - 0.934 - - -
33. NOL6 ENSGALG00000030730 7191 0.933 - - - - - - 0.933 - - - nucleolar protein 6
34. YWHAB ENSGALG00000004143 40276 0.923 - - - - - - 0.923 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
35. C5ORF13 C5ORF13 50177 0.923 - - - - - - 0.923 - - -
36. PTBP1 ENSGALG00000001962 66983 0.897 - - - - - - - 0.897 - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
37. TCOF1 ENSGALG00000005535 24554 0.877 - - - - - - 0.877 - - - treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
38. HSPB7L ENSGALG00000028183 795 0.871 0.871 - - - - - - - - - heat shock protein beta-7-like
39. MYBPC3 ENSGALG00000008148 315 0.87 0.870 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
40. ANXA11 ENSGALG00000043826 5189 0.868 - - - - 0.868 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
41. MYL3 ENSGALG00000005448 3379 0.864 0.864 - - - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
42. MYL2 ENSGALG00000004582 2245 0.861 0.861 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
43. TIA1 ENSGALG00000013879 16330 0.857 - - - - 0.857 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
44. TNNC1 ENSGALG00000001459 7110 0.857 0.857 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
45. TNNT2 ENSGALG00000000302 568 0.852 0.852 - - - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
46. PIK3CD ENSGALG00000002583 1036 0.851 - - - - 0.851 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
47. NMT1 ENSGALG00000000857 5770 0.85 - - - - 0.850 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
48. ENSGALG00000005720 ENSGALG00000005720 1666 0.85 - - - - 0.850 - - - - -
49. RHBDF1 ENSGALG00000007434 2359 0.85 - - - - 0.850 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
50. SSR3 ENSGALG00000028683 24334 0.849 - - - - 0.849 - - - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
51. ACTC1 ENSGALG00000009844 20914 0.849 0.849 - - - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
52. C9orf89 C9orf89 3056 0.848 - - - - 0.848 - - - - -
53. MAP1LC3A ENSGALG00000038721 2230 0.848 - - - - 0.848 - - - - - microtubule associated protein 1 light chain 3 alpha
54. CSNK1E ENSGALG00000032257 2165 0.847 - - - - 0.847 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
55. ITPK1 ENSGALG00000034898 4212 0.847 - - - - 0.847 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
56. KAT6A ENSGALG00000003641 2631 0.846 - - - - 0.846 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
57. UBE2D1 ENSGALG00000021213 5876 0.846 - - - - 0.846 - - - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
58. TMEM65 ENSGALG00000037371 776 0.846 - - - - 0.846 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
59. PCIF1 ENSGALG00000023547 867 0.846 - - - - 0.846 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
60. CDR2L ENSGALG00000026295 4142 0.846 - - - - 0.846 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
61. LSMD1 LSMD1 2562 0.846 - - - - 0.846 - - - - -
62. MXD4 ENSGALG00000015688 1472 0.846 - - - - 0.846 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
63. COPA ENSGALG00000009153 11618 0.845 - - - - 0.845 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
64. BTBD7 4136 0.845 - - - - 0.845 - - - - - BTB domain containing 7, transcript variant X2
65. HABP4 ENSGALG00000012628 2894 0.845 - - - - 0.845 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
66. TMEM167A ENSGALG00000027332 13862 0.845 - - - - 0.845 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
67. FOCAD ENSGALG00000015071 3677 0.845 - - - - 0.845 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
68. MANF ENSGALG00000002362 7518 0.844 - - - - 0.844 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
69. WSB2 ENSGALG00000008151 13246 0.844 - - - - 0.844 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
70. RBM15B 5416 0.844 - - - - 0.844 - - - - - RNA binding motif protein 15B
71. RSU1 ENSGALG00000040891 12561 0.844 - - - - 0.844 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
72. MAP3K13 ENSGALG00000006655 632 0.844 - - - - 0.844 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
73. TIMM21 ENSGALG00000013709 3215 0.844 - - - - 0.844 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
74. AEN ENSGALG00000044204 2633 0.843 - - - - 0.843 - - - - - apoptosis enhancing nuclease, transcript variant X1
75. TOR4A ENSGALG00000008623 1364 0.843 - - - - - - - - 0.843 - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
76. RBM17 ENSGALG00000006332 12656 0.843 - - - - 0.843 - - - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
77. CNOT2 ENSGALG00000010042 7612 0.842 - - - - 0.842 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
78. CRIPT ENSGALG00000010014 4311 0.841 - - - - 0.841 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
79. MTG1 ENSGALG00000003549 5032 0.841 - - - - 0.841 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
80. NOL12 ENSGALG00000012410 5658 0.841 - - - - 0.841 - - - - - nucleolar protein 12
81. FAM18B1 ENSGALG00000001335 5177 0.84 - - - - 0.840 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
82. PPP4R2 ENSGALG00000007810 15127 0.84 - - - - 0.840 - - - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
83. PDXP ENSGALG00000023131 2663 0.84 - - - - 0.840 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
84. MYH15 ENSGALG00000015358 6304 0.84 0.840 - - - - - - - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
85. TRIM55 ENSGALG00000041327 1097 0.839 0.839 - - - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
86. SRP68 ENSGALG00000002062 7370 0.838 - - - - 0.838 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
87. AIP ENSGALG00000040247 4166 0.838 - - - - 0.838 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
88. CLSPN ENSGALG00000002346 2590 0.838 - - - - 0.838 - - - - - claspin [Source:NCBI gene;Acc:428223]
89. COPG2 ENSGALG00000008144 4542 0.837 - - - - 0.837 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
90. PAXIP1 ENSGALG00000036064 3120 0.837 - - - - 0.837 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
91. COPB2 ENSGALG00000005357 15208 0.837 - - - - 0.837 - - - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
92. SFRP2 ENSGALG00000009241 4716 0.836 - - - - 0.836 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
93. DARS ENSGALG00000012355 2887 0.836 - - - - 0.836 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
94. TDRD3 ENSGALG00000016936 3412 0.835 - - - - 0.835 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
95. ADSL ENSGALG00000012034 10280 0.835 - - - - 0.835 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
96. GLB1L2 ENSGALG00000001604 4057 0.832 - - - - 0.832 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
97. B4GAL-T7 B4GAL-T7 12356 0.832 - - - - 0.832 - - - - -
98. DRG1 ENSGALG00000006921 10791 0.832 - - - - 0.832 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
99. SOD2 ENSGALG00000011661 13178 0.832 - - - - 0.832 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
100. FBXW7 ENSGALG00000010103 5982 0.832 - - - - 0.832 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]

There are 131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA