Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-30d

Gene Name Gene ID Reads Annotation
gga-mir-30d ENSGALG00000018290 9 gga-mir-30d [Source:miRBase;Acc:MI0001198]











Genes with expression patterns similar to gga-mir-30d

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-30d ENSGALG00000018290 9 6 - - 1.000 1.000 1.000 1.000 1.000 1.000 - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
2. USH2A ENSGALG00000009652 2 1.952 - - - 1.000 - 0.952 - - - - usherin, transcript variant X3
3. FADD ENSGALG00000007625 142 1.918 - - - - - - 0.927 0.991 - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
4. C14orf159 C14orf159 7 1.889 - - - - - - 0.889 1.000 - -
5. IL6 ENSGALG00000010915 8 1.645 - - - 0.806 - - 0.839 - - - interleukin 6 [Source:NCBI gene;Acc:395337]
6. KCNJ16 ENSGALG00000004373 6 1 - - - - - - - 1.000 - - potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
7. GLP2R ENSGALG00000041800 10 1 - - - - - - 1.000 - - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
8. PPFIA2 ENSGALG00000010958 27 1 - - - - - - 1.000 - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
9. ADAM33 ENSGALG00000030602 7 1 - - - - - - - 1.000 - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
10. STAM2 ENSGALG00000012513 9 1 - - - - - - - 1.000 - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
11. IFNAR1 ENSGALG00000030363 22 1 - - - - - - 1.000 - - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
12. PRDM8 ENSGALG00000038372 928 1 - - - - - - - 1.000 - - PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
13. LOC112532977 ENSGALG00000020986 1 1 - - - 1.000 - - - - - - G-protein coupled receptor 35-like, transcript variant X2
14. CFD ENSGALG00000040832 222 1 - - - - - - 1.000 - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
15. IL17F ENSGALG00000016677 9 1 - - - 1.000 - - - - - - interleukin 17F
16. ARL15 ENSGALG00000014911 13 1 - - - 1.000 - - - - - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
17. STK36 ENSGALG00000011371 6 1 - - - - - - 1.000 - - - serine/threonine kinase 36 [Source:HGNC Symbol;Acc:HGNC:17209]
18. UNC80 ENSGALG00000041563 15 1 - - - - - - 1.000 - - - unc-80 homolog, NALCN activator, transcript variant X3
19. BTBD6 ENSGALG00000033813 163 1 - - - 1.000 - - - - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
20. SYTL2L ENSGALG00000008326 5 1 - - - 1.000 - - - - - - synaptotagmin-like protein 2-like, transcript variant X4
21. GPD1L2 ENSGALG00000012061 31 1 - - - 1.000 - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
22. gga-mir-6579-2 ENSGALG00000035346 7 1 - - - - - - 1.000 - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
23. CECR2 ENSGALG00000013034 12 1 - - - 1.000 - - - - - - CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
24. CSGALNACT1 ENSGALG00000010125 5 1 - - - - - - 1.000 - - - chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
25. gga-mir-301a ENSGALG00000029989 5 1 - - - - - - 1.000 - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
26. ICMT ENSGALG00000024053 10 1 - - - - - - - 1.000 - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
27. RALGPS1_1 ENSGALG00000000906 7 1 - - - - - - - 1.000 - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
28. ENSGALG00000016269 ENSGALG00000016269 3 1 - - - - - - 1.000 - - -
29. ENSGALG00000012674 ENSGALG00000012674 109 1 - - - - - - 1.000 - - -
30. NFAM1 ENSGALG00000011872 1 1 - - - - - - - 1.000 - - NFAT activating protein with ITAM motif 1, transcript variant X1
31. ENSGALG00000028196 ENSGALG00000028196 8 1 - - - 1.000 - - - - - -
32. ACACB 6 1 - - - 1.000 - - - - - - acetyl-CoA carboxylase beta
33. RPL3L ENSGALG00000005458 9 1 - - - - - - 1.000 - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
34. MGRN1 ENSGALG00000037492 372 1 - - - 1.000 - - - - - - mahogunin ring finger 1 [Source:HGNC Symbol;Acc:HGNC:20254]
35. TTC7B ENSGALG00000010680 4 1 - - - 1.000 - - - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
36. TP53I3 ENSGALG00000016502 178 1 - - - 1.000 - - - - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
37. TNFSF11 ENSGALG00000026163 26 1 - - - 1.000 - - - - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
38. GSS ENSGALG00000003281 57 1 - - - 1.000 - - - - - - glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
39. DBX1 ENSGALG00000003965 1432 1 - - - - - - - 1.000 - - developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
40. ENSGALG00000006003 ENSGALG00000006003 11 1 - - - - - - 1.000 - - -
41. ATP10D ENSGALG00000014192 94 1 - - - - - - 1.000 - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
42. RNF212 ENSGALG00000040805 3 1 - - - - - - 1.000 - - - ring finger protein 212 [Source:HGNC Symbol;Acc:HGNC:27729]
43. IL4 ENSGALG00000006827 2 1 - - - - - - - 1.000 - - interleukin 4 [Source:NCBI gene;Acc:416330]
44. CTH ENSGALG00000011331 2390 1 - - - - - - 1.000 - - - cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
45. P2RY13 ENSGALG00000039432 16 1 - - - 1.000 - - - - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
46. JADE3 ENSGALG00000016727 55 1 - - - - - - 1.000 - - - jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]
47. HSD3B7 ENSGALG00000045366 12 1 - - - - - - - 1.000 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
48. PIT-1 PIT-1 8 1 - - - - - - - 1.000 - -
49. RBM43 ENSGALG00000012479 5 1 - - - 1.000 - - - - - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
50. UAP1L1 ENSGALG00000034948 3 1 - - - 1.000 - - - - - - UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 [Source:HGNC Symbol;Acc:HGNC:28082]
51. PTGES ENSGALG00000038013 77 1 - - - - - - 1.000 - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
52. ENSGALG00000006449 ENSGALG00000006449 1 1 - - - 1.000 - - - - - -
53. PLCL1 ENSGALG00000008113 23 1 - - - - - - - 1.000 - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
54. CCDC112 ENSGALG00000045092 38 0.998 - - - - - - - 0.998 - - coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
55. SUPT7L ENSGALG00000010048 8 0.998 - - - - - - - 0.998 - - SPT7 like, STAGA complex gamma subunit [Source:HGNC Symbol;Acc:HGNC:30632]
56. BDH1B ENSGALG00000006976 9 0.998 - - - - - - - 0.998 - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
57. PCCA ENSGALG00000016872 103 0.998 - - - - - - - 0.998 - - propionyl-CoA carboxylase subunit alpha [Source:HGNC Symbol;Acc:HGNC:8653]
58. INSRR ENSGALG00000013253 54 0.998 - - - - - - - 0.998 - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
59. SYNJ2 ENSGALG00000013727 17 0.991 - - - - - - - 0.991 - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
60. FAM19A1 32 0.991 - - - - - - - 0.991 - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
61. RASGRP3 ENSGALG00000010435 19 0.962 - - - - - - - 0.962 - - RAS guanyl releasing protein 3 [Source:NCBI gene;Acc:421460]
62. SCL SCL 69 0.961 - - - - - - - 0.961 - -
63. MFNG ENSGALG00000012442 5 0.952 - - - - - 0.952 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
64. GALNTL6 ENSGALG00000030588 3 0.952 - - - - - 0.952 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
65. GPR97 GPR97 16 0.952 - - - - - - - 0.952 - -
66. ICK ENSGALG00000016321 19 0.952 - - - - - 0.952 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
67. ESYT3 ENSGALG00000012092 13 0.952 - - - - - 0.952 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
68. CCR8 ENSGALG00000038069 6 0.952 - - - - - 0.952 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
69. ADPGK ENSGALG00000001788 208 0.952 - - - - - - 0.952 - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
70. ATP1B4 ENSGALG00000008593 39 0.952 - - - - - 0.952 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
71. ENSGALG00000028527 ENSGALG00000028527 1 0.952 - - - - - 0.952 - - - -
72. KCNK10 ENSGALG00000010598 7 0.952 - - - - - 0.952 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
73. ZMAT3 ENSGALG00000040948 4 0.952 - - - - - 0.952 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
74. LRCH3 ENSGALG00000007595 21 0.952 - - - - - 0.952 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
75. KREMEN1 ENSGALG00000005808 5 0.952 - - - - - 0.952 - - - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
76. PDC ENSGALG00000030417 4 0.952 - - - - - 0.952 - - - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
77. ENSGALG00000005650 ENSGALG00000005650 6 0.951 - - - 0.951 - - - - - -
78. RAC3 ENSGALG00000040606 355 0.95 - - - - - - - 0.950 - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
79. AFTPH ENSGALG00000008828 21 0.949 - - - - - - - 0.949 - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
80. IL-12B IL-12B 14 0.943 - - - - - - - 0.943 - -
81. HBE1 ENSGALG00000028273 189 0.943 - - - - - - - 0.943 - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
82. EHD4 ENSGALG00000008950 22 0.943 - - - - - - - 0.943 - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
83. ZEB2 ENSGALG00000040465 315 0.943 - - - - - - - 0.943 - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
84. GALK1 ENSGALG00000002311 13 0.941 - - - - - - - 0.941 - - galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]
85. PLCB2 ENSGALG00000042105 2 0.937 - - - 0.937 - - - - - - phospholipase C beta 2 [Source:HGNC Symbol;Acc:HGNC:9055]
86. C10orf67 15 0.937 - - - 0.937 - - - - - - chromosome 10 open reading frame 67, transcript variant X2
87. KEL ENSGALG00000014736 18 0.936 - - - - - - - 0.936 - - Kell blood group, metallo-endopeptidase, transcript variant X4
88. C1S ENSGALG00000014603 80 0.931 - - - - - - - 0.931 - - complement C1s [Source:NCBI gene;Acc:418294]
89. CACNG2 ENSGALG00000031977 196 0.926 - - - - - - - 0.926 - - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
90. RORALPHA1 RORALPHA1 119 0.925 - - - - - 0.925 - - - -
91. XRCC4 ENSGALG00000015620 28 0.92 - - - 0.920 - - - - - - X-ray repair cross complementing 4 [Source:HGNC Symbol;Acc:HGNC:12831]
92. EPYC ENSGALG00000011269 17 0.92 - - - - - - - 0.920 - - epiphycan [Source:NCBI gene;Acc:417890]
93. ARMC7 ENSGALG00000007961 217 0.92 - - - - - - - 0.920 - - armadillo repeat containing 7 [Source:NCBI gene;Acc:422118]
94. SRRL ENSGALG00000002638 26 0.918 - - - - - - 0.918 - - - serine racemase-like, transcript variant X8
95. NMNAT3 ENSGALG00000026187 11 0.916 - - - - - - 0.916 - - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
96. OGDHL ENSGALG00000002266 57 0.913 - - - - - 0.913 - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
97. CPN2 ENSGALG00000045776 18 0.913 - - - - - - - 0.913 - - carboxypeptidase N subunit 2
98. KL ENSGALG00000017068 21 0.912 - - - - - - - 0.912 - - klotho [Source:HGNC Symbol;Acc:HGNC:6344]
99. CITED2 ENSGALG00000013818 4 0.91 - - - - - - - 0.910 - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
100. FAM46D 22 0.909 - - - - - - - 0.909 - - family with sequence similarity 46 member D

There are 180 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA