Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-218-1

Gene Name Gene ID Reads Annotation
gga-mir-218-1 ENSGALG00000018327 3 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]











Genes with expression patterns similar to gga-mir-218-1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-218-1 ENSGALG00000018327 3 3 - - - 1.000 - - - 1.000 - 1.000 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
2. TRAF6 ENSGALG00000007932 12 2 - - - - - - - 1.000 - 1.000 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
3. COL4A3 ENSGALG00000038612 41 1.855 - - - - - - - 1.000 - 0.855 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
4. IQSEC3 ENSGALG00000012975 4 1.77 - - - 0.770 - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
5. ANKRD31 46 1.73 - - - - - - - 1.000 - 0.730 ankyrin repeat domain 31, transcript variant X2
6. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
7. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
8. STMN2 ENSGALG00000039690 989 1 - - - - - - - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
9. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
10. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
11. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
12. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
13. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
14. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
15. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
16. MICALL2 ENSGALG00000004070 23 1 - - - - - - - 1.000 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
17. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
18. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
19. RMST RMST 2 1 - - - - - - - 1.000 - -
20. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
21. ENSGALG00000018431 ENSGALG00000018431 2 1 - - - 1.000 - - - - - -
22. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
23. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
24. PPIL6 ENSGALG00000015237 11 1 - - - - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
25. ENSGALG00000026721 ENSGALG00000026721 1 1 - - - 1.000 - - - - - -
26. SLC15A1 ENSGALG00000016884 10 1 - - - - - - - 1.000 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
27. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
28. SCG5 ENSGALG00000009725 10 1 - - - - - - - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
29. ZC2HC1B 15 1 - - - - - - - - - 1.000 zinc finger C2HC-type containing 1B
30. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
31. CTSD ENSGALG00000006613 4 1 - - - 1.000 - - - - - - cathepsin D [Source:NCBI gene;Acc:396090]
32. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
33. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
34. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
35. DMGDH ENSGALG00000004491 15 1 - - - - - - - 1.000 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
36. SLC6A20 ENSGALG00000039333 1 1 - - - - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
37. RGS10 ENSGALG00000009422 10 1 - - - 1.000 - - - - - - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
38. IL18R1 ENSGALG00000040621 12 1 - - - - - - - 1.000 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
39. PBEF1 PBEF1 25 1 - - - - - - - 1.000 - -
40. ENSGALG00000028137 ENSGALG00000028137 2 1 - - - - - - - - - 1.000
41. NMNAT3 ENSGALG00000026187 11 1 - - - - - - - 1.000 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
42. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
43. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
44. CYR61 ENSGALG00000008661 43 1 - - - - - - - 1.000 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
45. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
46. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
47. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
48. DENND5A ENSGALG00000005840 54 1 - - - - - - - 1.000 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
49. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
50. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - - - 1.000 - -
51. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
52. ETNK2 ENSGALG00000000557 4 1 - - - - - - - - - 1.000 ethanolamine kinase 2 [Source:HGNC Symbol;Acc:HGNC:25575]
53. SEC16B ENSGALG00000004424 4 1 - - - - - - - 1.000 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
54. ATMIN ENSGALG00000040475 16 1 - - - - - - - - - 1.000 ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
55. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
56. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
57. GRM3 ENSGALG00000006576 474 1 - - - - - - - 1.000 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
58. RBL2 ENSGALG00000003663 10 1 - - - - - - - 1.000 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
59. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
60. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
61. B2M ENSGALG00000002160 4 1 - - - - - - - 1.000 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
62. FADS6 ENSGALG00000029445 12 1 - - - - - - - 1.000 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
63. LRCH1 ENSGALG00000016990 17 1 - - - - - - - 1.000 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
64. ADAMTS8 ENSGALG00000001370 0 1 - - - - - - - 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
65. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
66. CBR4 ENSGALG00000009714 7 1 - - - - - - - 1.000 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
67. NINJ2 ENSGALG00000012989 2 1 - - - - - - - - - 1.000 ninjurin 2 [Source:HGNC Symbol;Acc:HGNC:7825]
68. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
69. LRP3 ENSGALG00000004853 13 1 - - - - - - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
70. VIL1 ENSGALG00000037286 5 1 - - - - - - - - - 1.000 villin 1 [Source:NCBI gene;Acc:396423]
71. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
72. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
73. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
74. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
75. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
76. SKI ENSGALG00000001229 50 1 - - - - - - - 1.000 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
77. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
78. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
79. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
80. AVDL ENSGALG00000021848 1 1 - - - 1.000 - - - - - - avidin-like, transcript variant X2
81. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
82. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
83. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
84. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
85. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
86. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
87. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
88. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
89. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
90. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
91. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
92. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
93. ENSGALG00000013079 ENSGALG00000013079 12 1 - - - 1.000 - - - - - -
94. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
95. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
96. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
97. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
98. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
99. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
100. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]

There are 244 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA