Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-21

Gene Name Gene ID Reads Annotation
gga-mir-21 ENSGALG00000021733 42 gga-mir-21 [Source:miRBase;Acc:MI0004994]











Genes with expression patterns similar to gga-mir-21

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-21 ENSGALG00000021733 42 2 - 1.000 1.000 - - - - - - - gga-mir-21 [Source:miRBase;Acc:MI0004994]
2. gga-mir-1652 ENSGALG00000025444 119 0.946 - - 0.946 - - - - - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
3. PDE1A ENSGALG00000008885 4 0.937 - - 0.937 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
4. RHCG ENSGALG00000006635 7 0.937 - - 0.937 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
5. PABPC1L ENSGALG00000004123 2 0.937 - - 0.937 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
6. AGRP ENSGALG00000002244 27 0.937 - - 0.937 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
7. DOK4 ENSGALG00000001160 2 0.937 - - 0.937 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
8. TAPP2 TAPP2 2 0.937 - - 0.937 - - - - - - -
9. VCAM1 ENSGALG00000005257 102 0.937 - - 0.937 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
10. GIF ENSGALG00000031546 2 0.937 - - 0.937 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
11. GABRG1 ENSGALG00000020143 5 0.937 - - 0.937 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
12. ENSGALG00000009969 ENSGALG00000009969 2 0.937 - - 0.937 - - - - - - -
13. CSF3R ENSGALG00000002112 2 0.937 - - 0.937 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
14. MYRFL ENSGALG00000019352 2 0.937 - - 0.937 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
15. PCDH12 ENSGALG00000002544 36 0.913 - - 0.913 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
16. CLDN10 ENSGALG00000019114 2 0.892 - - 0.892 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
17. CD101 12 0.89 - - 0.890 - - - - - - - CD101 molecule, transcript variant X4
18. MZB1 ENSGALG00000044427 6 0.89 - - 0.890 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
19. UPB1 ENSGALG00000006627 139 0.89 - - 0.890 - - - - - - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
20. KCTD14 ENSGALG00000017266 31 0.869 - - 0.869 - - - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
21. TBXA2R ENSGALG00000037888 24 0.869 - - 0.869 - - - - - - - thromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]
22. PIAS2 ENSGALG00000039434 73 0.864 - - 0.864 - - - - - - - protein inhibitor of activated STAT 2 [Source:NCBI gene;Acc:416383]
23. HELB ENSGALG00000009885 8 0.861 - - 0.861 - - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
24. SLC32A1 ENSGALG00000038919 61 0.854 - - 0.854 - - - - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
25. TMC3 ENSGALG00000006376 12 0.841 - - 0.841 - - - - - - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
26. GREB1L ENSGALG00000014935 88 0.833 - - 0.833 - - - - - - - GREB1 like retinoic acid receptor coactivator [Source:HGNC Symbol;Acc:HGNC:31042]
27. HPS6 ENSGALG00000020741 4 0.829 - - 0.829 - - - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
28. C3orf58 ENSGALG00000002347 27 0.813 - - 0.813 - - - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
29. NOXRED1 ENSGALG00000042509 27 0.811 - - 0.811 - - - - - - - NADP dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20487]
30. UNC80 ENSGALG00000041563 15 0.81 - - 0.810 - - - - - - - unc-80 homolog, NALCN activator, transcript variant X3
31. MCF2 ENSGALG00000006562 59 0.802 - - 0.802 - - - - - - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
32. DGKG ENSGALG00000005721 17 0.8 - - 0.800 - - - - - - - diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
33. RNF208 ENSGALG00000008911 141 0.791 - - 0.791 - - - - - - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
34. TRIL ENSGALG00000011145 2 0.79 - - 0.790 - - - - - - - TLR4 interactor with leucine rich repeats [Source:HGNC Symbol;Acc:HGNC:22200]
35. GAD67 GAD67 146 0.779 - - 0.779 - - - - - - -
36. SERPINB5 ENSGALG00000012873 24 0.777 - - 0.777 - - - - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
37. HSD17B2 ENSGALG00000005467 275 0.776 - - 0.776 - - - - - - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
38. ENSGALG00000027143 ENSGALG00000027143 23 0.771 - - 0.771 - - - - - - -
39. ENSGALG00000019202 ENSGALG00000019202 9 0.769 - - 0.769 - - - - - - -
40. CHRNA6 ENSGALG00000015382 31 0.764 - - 0.764 - - - - - - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
41. FOXN4 ENSGALG00000005062 7 0.759 - - 0.759 - - - - - - - forkhead box N4 [Source:NCBI gene;Acc:416898]
42. RGS20 ENSGALG00000025941 108 0.75 - - 0.750 - - - - - - - regulator of G protein signaling 20 [Source:NCBI gene;Acc:395646]
43. ENSGALG00000028652 ENSGALG00000028652 65 0.747 - - 0.747 - - - - - - -
44. SBSPONL ENSGALG00000005862 129 0.745 - - 0.745 - - - - - - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
45. VWA1 ENSGALG00000001527 79 0.745 - - 0.745 - - - - - - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
46. MYH11 ENSGALG00000006520 166 0.733 - - 0.733 - - - - - - - myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
47. PARP8 ENSGALG00000032991 17 0.732 - - 0.732 - - - - - - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
48. FAM189A1 ENSGALG00000003944 331 0.731 - - 0.731 - - - - - - - family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075]
49. ENSGALG00000018499 ENSGALG00000018499 100 0.729 - - 0.729 - - - - - - -
50. FRS2 ENSGALG00000009966 63 0.726 - - 0.726 - - - - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
51. TMEM200A ENSGALG00000002282 77 0.726 - - 0.726 - - - - - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
52. PTGES ENSGALG00000038013 77 0.725 - - 0.725 - - - - - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
53. JADE2 ENSGALG00000006424 4 0.718 - - 0.718 - - - - - - - jade family PHD finger 2 [Source:HGNC Symbol;Acc:HGNC:22984]
54. PPP1R3E ENSGALG00000003492, ENSGALG00000041047 376 0.713 - - 0.713 - - - - - - - protein phosphatase 1 regulatory subunit 3E [Source:HGNC Symbol;Acc:HGNC:14943]
55. ZNF521 ENSGALG00000015112 8 0.712 - - 0.712 - - - - - - - zinc finger protein 521 [Source:HGNC Symbol;Acc:HGNC:24605]
56. SERINC4 ENSGALG00000042029 21 0.712 - - 0.712 - - - - - - - serine incorporator 4 [Source:HGNC Symbol;Acc:HGNC:32237]
57. PTP4A3 ENSGALG00000040969 10 0.708 - - 0.708 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:HGNC Symbol;Acc:HGNC:9636]
58. MTMR7 13 0.706 - - 0.706 - - - - - - - myotubularin related protein 7, transcript variant X1
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA