Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1801

Gene Name Gene ID Reads Annotation
gga-mir-1801 ENSGALG00000025241 13 gga-mir-1801 [Source:miRBase;Acc:MI0007545]











Genes with expression patterns similar to gga-mir-1801

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1801 ENSGALG00000025241 13 6 - - - 1.000 1.000 1.000 1.000 1.000 - 1.000 gga-mir-1801 [Source:miRBase;Acc:MI0007545]
2. FBXO43 ENSGALG00000038940 7 2 - - - - - - - 1.000 - 1.000 F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
3. STK31 ENSGALG00000010980 4 1.982 - - - 0.982 - - 1.000 - - - serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407]
4. FAM161A ENSGALG00000008810 36 1.795 - - - 0.913 - 0.882 - - - - FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
5. CILP ENSGALG00000007358 20 1.748 - - - 0.748 1.000 - - - - - cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
6. FGG ENSGALG00000009268 418 1.572 - - - - 0.797 0.775 - - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
7. ODF1 ENSGALG00000035199 32 1 - - - - - - 1.000 - - - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
8. BICD2 ENSGALG00000005249 17 1 - - - - - - - - - 1.000 BICD cargo adaptor 2 [Source:HGNC Symbol;Acc:HGNC:17208]
9. AGPAT2 ENSGALG00000023517 21 1 - - - - - - 1.000 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
10. ENSGALG00000014502 ENSGALG00000014502 2 1 - - - - 1.000 - - - - -
11. SIX6 ENSGALG00000020359 4 1 - - - - - - - - - 1.000 SIX homeobox 6 [Source:NCBI gene;Acc:395843]
12. PCDH7 ENSGALG00000033883 6 1 - - - - - - - - - 1.000 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
13. MARCO ENSGALG00000012119 5 1 - - - - - - - - - 1.000 macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
14. ODF2L ENSGALG00000006804 10 1 - - - - - - - - - 1.000 outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
15. TTC7B ENSGALG00000010680 4 1 - - - - - - - 1.000 - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
16. SPARCL1 ENSGALG00000010929 10 1 - - - - 1.000 - - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
17. LNX1 ENSGALG00000013940 2 1 - - - - - - - 1.000 - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
18. DNAI2 ENSGALG00000004495 45 1 - - - - - - 1.000 - - - dynein axonemal intermediate chain 2
19. CIB3 ENSGALG00000003978 2 1 - - - - - - - 1.000 - - calcium and integrin binding family member 3 [Source:HGNC Symbol;Acc:HGNC:24580]
20. TRIM29 ENSGALG00000042360 34 1 - - - - - 1.000 - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
21. ADCY1 ENSGALG00000031170 4 1 - - - - - - - - - 1.000 adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
22. FAM83A ENSGALG00000041748 8 1 - - - - - - - - - 1.000 family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
23. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - - - - - 1.000
24. ENSGALG00000000789 ENSGALG00000000789 24 1 - - - - - - 1.000 - - -
25. SESN3 ENSGALG00000017204 7 1 - - - - - - - 1.000 - - sestrin 3, transcript variant X2
26. SH3BP5 ENSGALG00000039337 17 1 - - - - - - - 1.000 - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
27. RBKS ENSGALG00000010043 3 1 - - - - - - - - - 1.000 ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
28. SDCBP2 ENSGALG00000028347 1 1 - - - - - 1.000 - - - - syndecan binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15756]
29. CDYL2 ENSGALG00000012978 6 1 - - - - - 1.000 - - - - chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
30. C1orf170 C1orf170 7 1 - - - - - - - - - 1.000
31. ENSGALG00000024306 ENSGALG00000024306 0 1 - - - - - - - 1.000 - -
32. ENSGALG00000002252 ENSGALG00000002252 19 1 - - - - - - - - - 1.000
33. SLC6A5 ENSGALG00000003908 3 1 - - - - - 1.000 - - - - solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051]
34. ENSGALG00000018374 ENSGALG00000018374 3 1 - - - - - - 1.000 - - -
35. FLT4 ENSGALG00000005802 5 1 - - - - - 1.000 - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
36. PLEKHF1 ENSGALG00000004474 8 1 - - - - - - - - - 1.000 pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
37. HAPLN4 ENSGALG00000026563 9 1 - - - - 1.000 - - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
38. CNGA1 ENSGALG00000014136 1 1 - - - - 1.000 - - - - - cyclic nucleotide gated channel alpha 1 [Source:NCBI gene;Acc:396143]
39. LRRC58 ENSGALG00000033186 15 1 - - - - - - - - - 1.000 leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
40. ARL6 ENSGALG00000019215 11 1 - - - - 1.000 - - - - - ADP ribosylation factor like GTPase 6 [Source:NCBI gene;Acc:418433]
41. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 1 - - - - - - - - - 1.000 MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
42. ALDH1A1 ENSGALG00000015147 3 1 - - - - - 1.000 - - - - aldehyde dehydrogenase 1 family member A1 [Source:NCBI gene;Acc:395264]
43. NKAIN4 ENSGALG00000005774 10 1 - - - - - - - - - 1.000 sodium/potassium transporting ATPase interacting 4 [Source:HGNC Symbol;Acc:HGNC:16191]
44. ENSGALG00000011926 ENSGALG00000011926 6 1 - - - - - 1.000 - - - -
45. CYP39A1 ENSGALG00000016710 16 1 - - - - - - 1.000 - - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
46. MOV10L1 ENSGALG00000033664 2 1 - - - - 1.000 - - - - - Mov10 like RISC complex RNA helicase 1 [Source:HGNC Symbol;Acc:HGNC:7201]
47. SEC16A ENSGALG00000002364 19 1 - - - - 1.000 - - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
48. FAM26D ENSGALG00000014955 1 1 - - - - - - 1.000 - - - family with sequence similarity 26 member D
49. SI ENSGALG00000009511 5 1 - - - - 1.000 - - - - - sucrase-isomaltase
50. GBP ENSGALG00000026152 38 1 - - - - - - 1.000 - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
51. HOXD9 ENSGALG00000027513 89 1 - - - - - - - - - 1.000 homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]
52. KCNRG ENSGALG00000017012 4 1 - - - - 1.000 - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
53. DNTT ENSGALG00000006983 2 1 - - - - - 1.000 - - - - DNA nucleotidylexotransferase [Source:NCBI gene;Acc:396351]
54. JMJD4 ENSGALG00000005417 10 1 - - - - - - 1.000 - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
55. ENSGALG00000001552 ENSGALG00000001552 4 1 - - - - - 1.000 - - - -
56. GPRIN2 ENSGALG00000002048 17 1 - - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
57. ENSGALG00000001483 ENSGALG00000001483 215 1 - - - - - - - 1.000 - -
58. CHSY1 ENSGALG00000026468 4 1 - - - - - - - - - 1.000 chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
59. SLC4A2 ENSGALG00000034284 3 1 - - - - - - - - - 1.000 solute carrier family 4 member 2 [Source:NCBI gene;Acc:395809]
60. ENSGALG00000026668 ENSGALG00000026668 34 1 - - - - - - - 1.000 - -
61. DAZL ENSGALG00000011243 34 1 - - - - - - 1.000 - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
62. PTPRC ENSGALG00000002192 10 1 - - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type C [Source:NCBI gene;Acc:386580]
63. TNN ENSGALG00000004538 21 1 - - - - - - - 1.000 - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
64. CDH6 ENSGALG00000012917 17 1 - - - - - 1.000 - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
65. GBF1 ENSGALG00000005637 32 1 - - - - 1.000 - - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
66. ENSGALG00000018626 ENSGALG00000018626 1 1 - - - - - - - - - 1.000
67. CDH8 ENSGALG00000005319 2 1 - - - - - - - - - 1.000 cadherin 8 [Source:NCBI gene;Acc:427553]
68. KLHL23 ENSGALG00000020737 13 1 - - - - - - - - - 1.000 kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
69. ABCB11 ENSGALG00000010891 24 1 - - - - 1.000 - - - - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
70. PRLL ENSGALG00000009603 30 1 - - - - - - - 1.000 - - prolactin-like protein [Source:NCBI gene;Acc:417800]
71. SNORD93 SNORD93 20 1 - - - - - 1.000 - - - -
72. LIN52 ENSGALG00000020419 37 1 - - - - - - - - - 1.000 lin-52 DREAM MuvB core complex component [Source:NCBI gene;Acc:423346]
73. JAKMIP3 ENSGALG00000010486 2 1 - - - - - - - - - 1.000 Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
74. XKRX ENSGALG00000006637 13 1 - - - - - 1.000 - - - - XK related, X-linked, transcript variant X4
75. INTS3 8 1 - - - - - - 1.000 - - - integrator complex subunit 3, transcript variant X2
76. SNX18 ENSGALG00000014914 7 1 - - - - - - - 1.000 - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
77. ENSGALG00000007003 ENSGALG00000007003 2 1 - - - - - - - 1.000 - -
78. VPS51 ENSGALG00000004166 204 1 - - - - 1.000 - - - - - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
79. BCAS1 ENSGALG00000007796 379 1 - - - - - - - - - 1.000 breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
80. KRT20 ENSGALG00000019716 11 1 - - - - - - 1.000 - - - keratin 20 [Source:NCBI gene;Acc:420045]
81. MBLAC2 ENSGALG00000014649 16 1 - - - - - - 1.000 - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
82. ENSGALG00000020616 ENSGALG00000020616 3 1 - - - - - - - 1.000 - -
83. C18orf32 ENSGALG00000042000 114 1 - - - - 1.000 - - - - - chromosome 18 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:31690]
84. WNT9A ENSGALG00000005401 7 1 - - - - - - 1.000 - - - Wnt family member 9A [Source:NCBI gene;Acc:395829]
85. ADAM33 ENSGALG00000030602 7 1 - - - - - - - - - 1.000 ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
86. gga-mir-1652 ENSGALG00000025444 119 1 - - - - - - 1.000 - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
87. ALPI ENSGALG00000023866 19 1 - - - - - - - 1.000 - - alkaline phosphatase, intestinal, transcript variant X2
88. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - 1.000 - -
89. AMER3 ENSGALG00000041501 5 1 - - - - - - 1.000 - - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
90. HEG1 ENSGALG00000011813 6 1 - - - - 1.000 - - - - - heart development protein with EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:29227]
91. LRRC34 ENSGALG00000009402 3 1 - - - - - - - 1.000 - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
92. FAM120B ENSGALG00000011180 101 1 - - - - - - 1.000 - - - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
93. CNKSR3 ENSGALG00000027159 41 1 - - - - 1.000 - - - - - CNKSR family member 3, transcript variant X2
94. CACNA1H ENSGALG00000005215 110 1 - - - - - - - - - 1.000 calcium voltage-gated channel subunit alpha1 H [Source:HGNC Symbol;Acc:HGNC:1395]
95. ABCG1 ENSGALG00000016164 10 1 - - - - 1.000 - - - - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
96. LDB1 ENSGALG00000007641 2 1 - - - - - - - - - 1.000 LIM domain binding 1 [Source:NCBI gene;Acc:395952]
97. PDE6C ENSGALG00000006626 6 1 - - - - - - 1.000 - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
98. GAREM GAREM 16 1 - - - - 1.000 - - - - -
99. LNX2 LNX2 4 1 - - - - - - - - - 1.000
100. ATG7 ENSGALG00000004932 8 1 - - - - - - - - - 1.000 autophagy related 7 [Source:NCBI gene;Acc:415961]

There are 236 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA