Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1787

Gene Name Gene ID Reads Annotation
gga-mir-1787 ENSGALG00000025542 1373 gga-mir-1787 [Source:miRBase;Acc:MI0007530]











Genes with expression patterns similar to gga-mir-1787

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1787 ENSGALG00000025542 1373 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-1787 [Source:miRBase;Acc:MI0007530]
2. FGFRL1 ENSGALG00000037525 1687 0.997 - - - - - - - 0.997 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
3. TMEM100 ENSGALG00000026465 1785 0.996 - - - - - - - 0.996 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
4. ADARB1 ENSGALG00000007527 2480 0.996 - - - - - - - 0.996 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
5. ANKRD17 ENSGALG00000011642 3192 0.996 - - - - - - - 0.996 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
6. RBM6 ENSGALG00000035578 1690 0.996 - - - - - - - 0.996 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
7. ZMYM4 ENSGALG00000002499 435 0.996 - - - - - - - 0.996 - - zinc finger MYM-type containing 4, transcript variant X1
8. ENSGALG00000026930 ENSGALG00000026930 681 0.995 - - - - - - - 0.995 - -
9. SNCAIP ENSGALG00000005330 2425 0.995 - - - - - - - 0.995 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
10. NFASC ENSGALG00000031776 4264 0.995 - - - - - - - 0.995 - - neurofascin [Source:NCBI gene;Acc:419824]
11. TECPR2 ENSGALG00000011373 1063 0.995 - - - - - - - 0.995 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
12. PAX-6 PAX-6 2650 0.995 - - - - - - - 0.995 - -
13. DOCK8 481 0.995 - - - - - - - 0.995 - - dedicator of cytokinesis 8, transcript variant X1
14. NAA50 ENSGALG00000033889 3551 0.994 - - - - - - - 0.994 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
15. FBXW8 ENSGALG00000008207 1639 0.994 - - - - - - - 0.994 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
16. EPS15 ENSGALG00000010543 1598 0.994 - - - - - - - 0.994 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
17. PPT1 ENSGALG00000003936 2540 0.993 - - - - - - - 0.993 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
18. PGS1 ENSGALG00000007181 3187 0.993 - - - - - - - 0.993 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
19. KIAA1432 KIAA1432 1792 0.993 - - - - - - - 0.993 - -
20. H2AFY_1 ENSGALG00000040141 4895 0.992 - - - - - - - 0.992 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
21. PTPN11 ENSGALG00000004821 2658 0.992 - - - - - - - 0.992 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
22. DENND5B 4077 0.991 - - - - - - - 0.991 - - DENN domain containing 5B, transcript variant X1
23. MB21D1 2460 0.99 - - - - - - - 0.990 - - Mab-21 domain containing 1
24. VPS13B 2293 0.989 - - - - - - - 0.989 - - vacuolar protein sorting 13 homolog B
25. EED ENSGALG00000014060 6467 0.989 - - - - - - - 0.989 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
26. MTRF1 ENSGALG00000016951 3983 0.989 - - - - - - - 0.989 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
27. CMC1 ENSGALG00000025811 3939 0.987 - - - - - - - 0.987 - - C-X9-C motif containing 1
28. KCTD9 ENSGALG00000000275 3455 0.987 - - - - - - - 0.987 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
29. ACAP2 ENSGALG00000007040 4182 0.987 - - - - - - - 0.987 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
30. KNOP1 ENSGALG00000002042 6251 0.986 - - - - - - - 0.986 - - lysine-rich nucleolar protein 1, transcript variant X1
31. ADD1 ENSGALG00000015664 6828 0.986 - - - - - - - 0.986 - - adducin 1 [Source:NCBI gene;Acc:422882]
32. FAS ENSGALG00000006351 461 0.984 - - - - - - - 0.984 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
33. RPAP1 ENSGALG00000008624 3522 0.984 - - - - - - - 0.984 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
34. LIN7C ENSGALG00000012170 5043 0.984 - - - - - - - 0.984 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
35. PRORSD1P ENSGALG00000034854 2924 0.982 - - - - - - - 0.982 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
36. QARS ENSGALG00000029980 4207 0.981 - - - - - - - 0.981 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
37. KDM4B ENSGALG00000034592 6711 0.981 - - - - - - - 0.981 - - lysine demethylase 4B, transcript variant X8
38. RIOK1 ENSGALG00000012795 4658 0.981 - - - - - - - 0.981 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
39. VRK1 ENSGALG00000011116 4524 0.978 - - - - - - - 0.978 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
40. OMA1 ENSGALG00000010861 3328 0.977 - - - - - - - 0.977 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
41. DDHD1 ENSGALG00000012426 6068 0.976 - - - - - - - 0.976 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
42. MAK16 ENSGALG00000001663 7455 0.974 - - - - - - - 0.974 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
43. RHOT1 ENSGALG00000003397 5149 0.973 - - - - - - - 0.973 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
44. PACSIN3 ENSGALG00000008231 5423 0.972 - - - - - - - 0.972 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
45. LMNB2 ENSGALG00000000470 4364 0.971 - - - - - - - 0.971 - - lamin B2 [Source:NCBI gene;Acc:396222]
46. ATP8B1 ENSGALG00000030834 521 0.97 - - - - - - - 0.970 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
47. C3H2ORF43 C3H2ORF43 5628 0.97 - - - - - - - 0.970 - -
48. SNAPC5 ENSGALG00000007695 4117 0.966 - - - - - - - 0.966 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
49. HDHD2 ENSGALG00000034801 6373 0.966 - - - - - - - 0.966 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
50. LGALS1 ENSGALG00000012420 13993 0.965 - - - - - - - 0.965 - - galectin 1 [Source:NCBI gene;Acc:396491]
51. FKBP15 ENSGALG00000008838 3677 0.96 - - - - - - - 0.960 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
52. MED10 ENSGALG00000028336 9343 0.959 - - - - - - - 0.959 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
53. FAM192A ENSGALG00000021473 10213 0.956 - - - - - - - 0.956 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
54. CHN1 ENSGALG00000009293 6415 0.955 - - - - - - - 0.955 - - chimerin 1 [Source:NCBI gene;Acc:429021]
55. RAB6A ENSGALG00000017320 10569 0.953 - - - - - - - 0.953 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
56. ACADSB ENSGALG00000041417 7710 0.949 - - - - - - - 0.949 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
57. MRPL48 ENSGALG00000017319 9773 0.949 - - - - - - - 0.949 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
58. UFD1L 12964 0.949 - - - - - - - 0.949 - - ubiquitin fusion degradation 1 like (yeast)
59. RNF10 ENSGALG00000036417 8027 0.949 - - - - - - - 0.949 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
60. NFI1 NFI1 6210 0.948 - - - - - - - 0.948 - -
61. IPO9 ENSGALG00000000397 9263 0.942 - - - - - - - 0.942 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
62. IGF2BP2 ENSGALG00000033195 11421 0.94 - - - - - - - 0.940 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
63. KXD1 ENSGALG00000036736 3771 0.938 - - - - - - - 0.938 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
64. ERLIN1 ENSGALG00000003308 6427 0.931 - - - - - - - 0.931 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
65. APIP ENSGALG00000031286 6838 0.921 - - - - - - - 0.921 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
66. VAPB ENSGALG00000007549 15511 0.916 - - - - - - - 0.916 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
67. RBP5 ENSGALG00000014662 31268 0.914 - - - - - - - 0.914 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
68. TPRG1L ENSGALG00000001024 9809 0.912 - - - - - - - 0.912 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
69. WBP11 ENSGALG00000011745 11182 0.911 - - - - - - - 0.911 - - WW domain binding protein 11, transcript variant X1
70. TSSC4 ENSGALG00000006530 10413 0.905 - - - - - - - 0.905 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
71. ZNF276 ENSGALG00000000513 2410 0.901 - - - - - - - 0.901 - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
72. STT3B ENSGALG00000011465 11939 0.898 - - - - - - - 0.898 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
73. SLC25A20 ENSGALG00000028227 7685 0.888 - - - - - - - 0.888 - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
74. LOC422426 ENSGALG00000009622 1470 0.882 - - - - - - - 0.882 - - uncharacterized LOC422426, transcript variant X2
75. WASL ENSGALG00000008797 5729 0.874 - - - - - - - 0.874 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
76. LOC407092 ENSGALG00000013809 10706 0.871 - - - - - - - 0.871 - - AD012Z, transcript variant X5
77. RBBP6 ENSGALG00000006043 9708 0.865 - - - - - - - 0.865 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
78. MESDC1 1013 0.847 - - - - - - - 0.847 - - mesoderm development candidate 1
79. ITGB5 ENSGALG00000029766 5978 0.845 - - - - - - - 0.845 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
80. TOP3B ENSGALG00000030051 5953 0.838 - - - - - - - 0.838 - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
81. MTCH2 ENSGALG00000036196 15097 0.835 - - - - - - - 0.835 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
82. CPSF2 ENSGALG00000010783 5236 0.83 - - - - - - - 0.830 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
83. DENR ENSGALG00000003795 30805 0.83 - - - - - - - 0.830 - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
84. GATD3A ENSGALG00000016918 24760 0.829 - - - - - - - 0.829 - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
85. TCEA2 ENSGALG00000005976 9143 0.818 - - - - - - 0.818 - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
86. TAX1BP1 ENSGALG00000042822 7728 0.813 - - - - - - - 0.813 - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
87. EPHA1 ENSGALG00000014687 174 0.808 - - - - - - 0.808 - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
88. NRSN1 ENSGALG00000037811 11424 0.808 - - - - - - - 0.808 - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
89. TFAM ENSGALG00000002703 19330 0.808 - - - - - - - 0.808 - - transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
90. CRMP1B CRMP1B 18633 0.805 - - - - - - - 0.805 - -
91. MFAP3 ENSGALG00000004040 6951 0.8 - - - - - - - 0.800 - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
92. TTYH2 ENSGALG00000026940 15628 0.797 - - - - - - - 0.797 - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
93. EDARADD ENSGALG00000031763 541 0.794 - - - - - - 0.794 - - - EDAR associated death domain [Source:NCBI gene;Acc:497625]
94. UBE2D3 ENSGALG00000012311 39831 0.793 - - - - - - - 0.793 - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
95. CAMK2D ENSGALG00000041635 3384 0.779 - - - - - - - 0.779 - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
96. TMEM18 ENSGALG00000028744 11779 0.777 - - - - - - - 0.777 - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
97. PNRC2 ENSGALG00000004122 19228 0.769 - - - - - - - 0.769 - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
98. UTRN ENSGALG00000012256 9980 0.765 - - - - - - - 0.765 - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
99. PAMR1 ENSGALG00000007886 928 0.764 - - - - - - 0.764 - - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
100. N4BP2L2 857 0.764 - - - - - - 0.764 - - - NEDD4 binding protein 2 like 2, transcript variant X7

There are 41 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA